New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1208841419 (0.730)34 (0.070) 21/160 30.7 7.3% coding (41/540 nt) b1157 putative tail fiber protein
?NC_000913 2469917 = 516 (1.060)coding (166/519 nt) yfdL putative RNA polymerase beta
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 617 total aligned reads displayed.

TCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCT  >  NC_000913/2469822‑2470012
                                                                                               |                                                                                               
tCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAg                                                                                                 <  1:7634985/96‑1 (MQ=255)
tCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATCCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAg                                                                                                 <  2:12892775/96‑1 (MQ=255)
 ccAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAgg                                                                                                >  2:8228837/1‑96 (MQ=255)
 ccAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAgg                                                                                                <  2:776460/96‑1 (MQ=255)
 ccAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGGATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAgg                                                                                                >  2:9098997/1‑96 (MQ=255)
  cAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCGGCTTCTCCCAAACCAAGGt                                                                                               >  1:4935393/1‑96 (MQ=255)
    ggAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGGATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGttt                                                                                             >  1:3177891/1‑96 (MQ=255)
     gAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGtttt                                                                                            >  1:9887831/1‑96 (MQ=255)
     gAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGtttt                                                                                            <  1:11813662/96‑1 (MQ=255)
     gAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGtttt                                                                                            >  1:8437378/1‑96 (MQ=255)
        cTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCga                                                                                         <  1:4391275/96‑1 (MQ=255)
          gAAGCAGAAAGCATAAACCTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCgaga                                                                                       <  2:12507718/96‑1 (MQ=255)
          gAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTCCATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCgaga                                                                                       <  1:5610101/96‑1 (MQ=255)
          gAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCgaga                                                                                       >  2:2378481/1‑96 (MQ=255)
           aaGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGagag                                                                                      <  1:954101/96‑1 (MQ=255)
           aaGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGagag                                                                                      <  1:4224540/96‑1 (MQ=255)
           aaGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGagag                                                                                      <  2:4258561/96‑1 (MQ=255)
              cAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGctt                                                                                   >  2:13376025/1‑94 (MQ=255)
              cAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCt                                                                                   >  2:2157122/1‑96 (MQ=255)
              cAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCt                                                                                   >  1:695629/1‑96 (MQ=255)
                 aaaGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCtttt                                                                                >  1:124377/1‑96 (MQ=255)
                 aaaGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCtttt                                                                                >  1:6711718/1‑96 (MQ=255)
                  aaGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTg                                                                               <  2:5684114/96‑1 (MQ=255)
                   aGCATAAAACTACCCATATCAGGTATCTGCTTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGc                                                                              >  2:6829342/1‑96 (MQ=255)
                    gCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCa                                                                             >  2:472022/1‑96 (MQ=255)
                     cATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCAc                                                                            >  2:2934937/1‑96 (MQ=255)
                     cATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCAc                                                                            <  1:2794363/96‑1 (MQ=255)
                       tAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCg                                                                          <  2:1948967/96‑1 (MQ=255)
                         aaaCTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTCGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTg                                                                        <  2:10412876/96‑1 (MQ=255)
                         aaaCTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTg                                                                        >  1:5995931/1‑96 (MQ=255)
                          aaCTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGc                                                                       >  2:4528871/1‑96 (MQ=255)
                           aCTTCCCATATTAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGcc                                                                      <  1:13160710/96‑1 (MQ=255)
                               cccATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTcc                                                                  <  1:10392429/96‑1 (MQ=255)
                                 cATATCAGGTATCTGATTCGCCCCTGTCCCTACCTTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCaa                                                                <  2:3510513/96‑1 (MQ=255)
                                 cATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCaa                                                                >  2:8972225/1‑96 (MQ=255)
                                 cATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCACTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCaa                                                                >  1:8252534/1‑96 (MQ=255)
                                  atatCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAAt                                                               >  2:6506388/1‑96 (MQ=255)
                                   tatCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGCGAGCCTTTTGCACCGTGCCGTCCAAtt                                                              <  2:10249436/96‑1 (MQ=255)
                                    atCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAAttt                                                             <  1:11998421/96‑1 (MQ=255)
                                         gTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGatat                                                        >  1:8750151/1‑96 (MQ=255)
                                          tATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATc                                                       <  1:7184850/96‑1 (MQ=255)
                                          tATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATc                                                       <  1:3658434/96‑1 (MQ=255)
                                            tCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCAAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGc                                                     <  2:1518459/96‑1 (MQ=255)
                                              tGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCa                                                   >  2:8663184/1‑96 (MQ=255)
                                                 ttCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAAc                                                <  2:8885607/96‑1 (MQ=255)
                                                 ttCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAAc                                                <  2:6338017/96‑1 (MQ=255)
                                                  tCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACg                                               <  1:10879685/96‑1 (MQ=255)
                                                   cGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTCCACCGTGCCGTCCAATTTGATATCGCCAAACgg                                              <  2:11596109/96‑1 (MQ=255)
                                                    gCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGa                                             >  2:13062607/1‑96 (MQ=255)
                                                     ccccTGTCCCTCCATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGAt                                            <  1:8926537/96‑1 (MQ=255)
                                                      cnnTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGAtt                                           <  1:11650826/96‑1 (MQ=255)
                                                       ccTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGGTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTc                                          >  1:3479112/1‑96 (MQ=255)
                                                         tGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTcct                                        <  1:7367013/96‑3 (MQ=255)
                                                          gTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTg                                       <  2:3914941/96‑1 (MQ=255)
                                                          gTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTg                                       <  1:11062081/96‑1 (MQ=255)
                                                           tCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGc                                      <  1:14014601/96‑1 (MQ=255)
                                                           tCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGc                                      <  2:8024480/96‑1 (MQ=255)
                                                            cccTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCg                                     >  1:8080960/1‑96 (MQ=255)
                                                            cccTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCg                                     >  2:5285044/1‑96 (MQ=255)
                                                             ccctcATTTTTTTTACCCGTTCCTCCCAAACCAAGATTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCgg                                    <  1:1000531/92‑1 (MQ=17)
                                                              cTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGc                                   <  2:670147/96‑1 (MQ=255)
                                                                aCATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCtt                                 >  1:12635950/1‑96 (MQ=255)
                                                                   tttCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGGCTTTTGCACCGTGCCGTCCAAGTTGATATCGCCAAACGGATTCTTGCGGCTTAAc                              <  2:6943633/96‑1 (MQ=255)
                                                                    ttCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAAca                             <  2:7496109/96‑1 (MQ=255)
                                                                      cTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAAcatc                           >  1:12892766/1‑94 (MQ=255)
                                                                      cTTCTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAACCGGATTCTTGCGGCTTAAcagc                           <  2:1725934/96‑1 (MQ=255)
                                                                        tttAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAAcagcag                         >  2:9773526/1‑96 (MQ=255)
                                                                        tttAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAAcagcag                         <  2:7132347/96‑1 (MQ=255)
                                                                        tttAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAAcagcag                         <  2:3111984/96‑1 (MQ=255)
                                                                         ttAGCCGCTGCTCCCAAACCAAGGTTTGCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACagcagc                        <  2:11069218/96‑1 (MQ=255)
                                                                          tAGCCGCTTCTCCCAACCCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAgcg                       <  1:2035407/96‑1 (MQ=255)
                                                                          tAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTCACAACAgcg                       >  2:13510345/1‑96 (MQ=255)
                                                                          tAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAgcg                       >  2:8393718/1‑96 (MQ=255)
                                                                          tAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAgcg                       <  1:3774586/96‑1 (MQ=255)
                                                                            gCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCa                     >  2:5914406/1‑96 (MQ=255)
                                                                              cGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACg                   >  1:2202434/1‑96 (MQ=255)
                                                                               gCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGa                  >  1:11166911/1‑96 (MQ=255)
                                                                               gCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGa                  <  2:12066305/96‑1 (MQ=255)
                                                                                cTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGaa                 <  1:5327080/96‑1 (MQ=255)
                                                                                cTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGaa                 >  2:202038/1‑96 (MQ=255)
                                                                                  tctcCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGaaac               <  1:7771982/96‑3 (MQ=255)
                                                                                  tctcCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAgc               <  1:4551697/96‑1 (MQ=255)
                                                                                    tcCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAgcgc             <  1:1576576/96‑1 (MQ=255)
                                                                                    tcCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAgcgc             <  1:3989906/96‑1 (MQ=255)
                                                                                    tcCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAgcgc             <  2:11966832/96‑1 (MQ=255)
                                                                                    tcCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAgcgc             <  1:1954686/96‑1 (MQ=255)
                                                                                     cccAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGcgcg            >  1:13696138/1‑96 (MQ=255)
                                                                                       cAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGt          <  1:9098997/96‑1 (MQ=255)
                                                                                       cAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGt          >  1:10669438/1‑96 (MQ=255)
                                                                                       cAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATCCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGt          <  2:1070810/96‑1 (MQ=255)
                                                                                         aaCCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTaa        >  2:3743970/1‑96 (MQ=255)
                                                                                          aCCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTaat       <  1:11372566/96‑2 (MQ=255)
                                                                                           ccAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAagc      <  2:6186914/96‑1 (MQ=255)
                                                                                           ccAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAagc      >  1:14353183/1‑96 (MQ=255)
                                                                                           ccAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAagc      <  2:2652904/96‑1 (MQ=255)
                                                                                           ccAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAagc      >  1:6394848/1‑96 (MQ=255)
                                                                                            cAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGGAagca     >  2:12731894/1‑96 (MQ=255)
                                                                                            cAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGATTAACAGCAGCGCACGAAGCGCGGTAagca     >  2:11329018/1‑96 (MQ=255)
                                                                                              aGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAagcagc   >  2:1411279/1‑96 (MQ=255)
                                                                                              aGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAagcagc   >  1:614412/1‑96 (MQ=255)
                                                                                               |                                                                                               
TCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCT  >  NC_000913/2469822‑2470012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.