New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1276748 =568 (0.980)6 (0.010) 5/174 43.4 1.1% coding (94/1797 nt) narX NarX
?NC_000913 1425561 = 563 (1.070)coding (80/156 nt) b1369 hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 613 total aligned reads displayed.

CTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAA  >  NC_000913/1425466‑1425656
                                                                                               |                                                                                               
cTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCggg                                                                                                 <  1:5663151/96‑1 (MQ=255)
 tGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGt                                                                                                >  2:7028903/1‑96 (MQ=255)
  ggCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGGGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCgggga                                                                                               >  2:3030179/1‑94 (MQ=255)
    cATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATg                                                                                             <  2:1735626/96‑1 (MQ=255)
     aTGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATgg                                                                                            <  2:2685567/96‑1 (MQ=255)
      tGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGc                                                                                           >  2:12963226/1‑96 (MQ=255)
       gAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCt                                                                                          <  2:4704694/96‑1 (MQ=255)
         aGATCCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTa                                                                                        <  1:522259/96‑1 (MQ=255)
           aTTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACa                                                                                      >  1:8428516/1‑96 (MQ=255)
            ttCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAg                                                                                     <  2:8426731/96‑1 (MQ=255)
             tCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGTCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTGTGGCTTACAgg                                                                                    >  1:1407291/1‑95 (MQ=255)
             tCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGc                                                                                    <  1:6515401/96‑1 (MQ=255)
             cgcGTGCGTAACCGCTGGGTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGc                                                                                    <  1:4741474/94‑1 (MQ=255)
               cGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGcag                                                                                  <  1:10644526/96‑3 (MQ=255)
                gTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATTGCTTACAGCCgt                                                                                 >  1:10002434/1‑96 (MQ=255)
                gTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCgt                                                                                 <  2:10472998/96‑1 (MQ=255)
                gTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCgt                                                                                 <  1:13752319/96‑1 (MQ=255)
                 tGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGGATGGCTTACAGCCggg                                                                                >  2:7825475/1‑94 (MQ=255)
                  gCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCgtgt                                                                               <  2:7580902/96‑1 (MQ=255)
                   cGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCgtgtg                                                                              <  1:1368691/96‑1 (MQ=255)
                   cGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCgtgtg                                                                              >  1:1861860/1‑96 (MQ=255)
                   cGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCgtgtg                                                                              <  1:757462/96‑1 (MQ=255)
                   cGTAACCGCTGGTTCAGCGGGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTAAGCGCGTATGCGATGGCGGGGATGGCTTACAGCCgcgtg                                                                              >  2:10647579/1‑96 (MQ=255)
                    ggaaCCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCgggtgt                                                                             >  1:9023788/3‑96 (MQ=255)
                    gTAACCGCTGGTTCAGCGTGATGGTGGAGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCgtgtgt                                                                             <  1:9835596/96‑1 (MQ=255)
                     tAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGGGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTc                                                                            >  1:7958322/1‑96 (MQ=255)
                          gCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACtt                                                                       <  2:13601960/96‑1 (MQ=255)
                          gCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACtt                                                                       <  1:7226633/96‑1 (MQ=255)
                           cTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACttt                                                                      >  2:6966767/1‑96 (MQ=255)
                            tGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTtc                                                                     >  2:13237066/1‑96 (MQ=255)
                            tGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTtc                                                                     <  2:6158062/96‑1 (MQ=255)
                            tGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGGGTGTCGACTTtc                                                                     >  1:4200162/1‑96 (MQ=255)
                            tGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGAATGGCTTACAGCCGTGTGTCGACTTtc                                                                     >  1:8808648/1‑96 (MQ=255)
                             ggTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTtct                                                                    >  1:12831054/1‑96 (MQ=255)
                                 cAGCGTGATGGTGGGGCCGTCTGTGCGCGTGACTGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCgg                                                                <  1:12299805/96‑1 (MQ=255)
                                  aGCGTGATTGTAGGGCCGTCTGTGCGCGTGAATGCATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGTCTTTCTCCggg                                                               <  1:6242055/96‑1 (MQ=255)
                                  aGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCggg                                                               >  2:389376/1‑96 (MQ=255)
                                   gCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCgggg                                                              >  2:2170469/1‑96 (MQ=255)
                                   gCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCgggg                                                              >  1:148690/1‑96 (MQ=255)
                                   gCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGGCGACTTTCTCCgggg                                                              >  1:7839272/1‑96 (MQ=255)
                                     gTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGAt                                                            <  2:3192721/96‑1 (MQ=255)
                                     gTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTAGGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGAt                                                            >  1:11674896/1‑96 (MQ=255)
                                             ggggCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCcg                                                    <  1:3906438/96‑1 (MQ=255)
                                             ggggCCGTCTGTGCGCGTGAATGAATGGGTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCcg                                                    >  1:921946/1‑96 (MQ=255)
                                              gggCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCcgc                                                   <  1:6965074/96‑1 (MQ=255)
                                              gggCCGTCTGTGCGCGTGAAAGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCcgc                                                   <  1:11219468/96‑1 (MQ=255)
                                              ggaccGGCTGTGCGCGTGAATCAATGGTTGAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCcgc                                                   <  1:10463617/93‑1 (MQ=255)
                                                  cgccTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGCCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTaa                                               <  1:10899551/93‑1 (MQ=255)
                                                   gTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAAc                                              >  2:4274599/1‑96 (MQ=255)
                                                    tCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACt                                             <  2:5019227/96‑1 (MQ=255)
                                                        tgCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGaca                                         <  1:5435254/96‑1 (MQ=255)
                                                         gcgcGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGacaa                                        <  2:3608714/96‑1 (MQ=255)
                                                         gcgcGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAAATGacaa                                        >  1:7426256/1‑96 (MQ=255)
                                                          cgcgTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGacaac                                       <  2:544487/96‑1 (MQ=255)
                                                           gcgTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGacaaca                                      >  1:3041520/1‑96 (MQ=255)
                                                           gcgTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGacaaca                                      >  2:9012314/1‑96 (MQ=255)
                                                           gcgTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGacaaca                                      >  2:11399438/1‑96 (MQ=255)
                                                             gagaaagaatGGTTCAGCGCGTACGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAg                                    <  1:13217205/94‑1 (MQ=255)
                                                              tgaatgaaTGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAgg                                   <  1:1350443/96‑1 (MQ=255)
                                                               gaatgaatGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAggg                                  <  1:9979046/96‑1 (MQ=255)
                                                                 atgaatgGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGaa                                <  1:5892815/96‑1 (MQ=255)
                                                                  tgaatgGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAg                               <  2:5785814/96‑1 (MQ=255)
                                                                    aatgGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGt                             >  2:8724982/1‑96 (MQ=255)
                                                                      tgGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGc                           >  1:8220656/1‑96 (MQ=255)
                                                                      tgGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGc                           <  1:4446878/96‑1 (MQ=255)
                                                                       ggTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCg                          <  1:3580982/96‑1 (MQ=255)
                                                                        gTTCAGCGCGTATGCGATGGCGGGGATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACGGACAACAAGGGCAGGTGCGa                         >  1:11940239/1‑96 (MQ=255)
                                                                         ttCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGaa                        <  1:9710120/96‑1 (MQ=255)
                                                                         ttCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGGGCGaa                        >  1:13140937/1‑96 (MQ=255)
                                                                         ttCAGCGCGTATGCGATGGCGGGGATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGaa                        >  2:11079275/1‑96 (MQ=255)
                                                                             gcgcGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAg                    >  1:2141320/1‑96 (MQ=255)
                                                                             gcgcGTACGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTACCTGACAACAAGGGAAGGTGCGAATAAg                    <  2:97585/96‑1 (MQ=255)
                                                                              cgcgTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGc                   >  2:3440626/1‑96 (MQ=255)
                                                                               gcgTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACGACAAGGGAAGGTGCGAATAAGCa                  >  1:12533616/1‑96 (MQ=255)
                                                                               gcgTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAGGCa                  >  2:4491646/1‑96 (MQ=255)
                                                                               gcgTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCa                  <  1:1216468/96‑1 (MQ=255)
                                                                               gcgTATGCGATGGCGGGTATGGCTTACAGCCGGGTGGCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCa                  >  2:4032252/1‑96 (MQ=255)
                                                                               gcgTATGCGATGGCGGGAATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTACGAATAAGCa                  >  1:11524371/1‑96 (MQ=255)
                                                                                cgTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAg                 <  1:2525013/96‑1 (MQ=255)
                                                                                 ggaTGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAgg                >  1:13074874/3‑96 (MQ=255)
                                                                                 gTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAgg                >  2:14224891/1‑96 (MQ=255)
                                                                                  tATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGt               >  2:13979366/1‑96 (MQ=255)
                                                                                  tATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGt               <  2:10737991/96‑1 (MQ=255)
                                                                                  tATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGt               <  2:1943391/96‑1 (MQ=255)
                                                                                   aTGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTc              >  1:5516676/1‑96 (MQ=255)
                                                                                     gCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCAt            <  1:3266280/96‑1 (MQ=255)
                                                                                      cGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCAtt           <  2:1174331/96‑1 (MQ=255)
                                                                                      cGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCAtt           >  2:5643415/1‑96 (MQ=255)
                                                                                        aTGGCGGGTCTGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGCGAAGGTGCGAATAAGCAGGTCATttc         <  2:145927/96‑1 (MQ=255)
                                                                                        aTGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATttc         <  2:1259604/96‑1 (MQ=255)
                                                                                         tGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCTGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATttct        <  2:12214604/96‑1 (MQ=255)
                                                                                         tGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATttct        <  2:6573065/96‑1 (MQ=255)
                                                                                          ggCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATttctt       <  1:10231103/96‑1 (MQ=255)
                                                                                          ggCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATttctt       <  2:2485845/96‑1 (MQ=255)
                                                                                           gCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATttcttc      >  2:9485650/1‑96 (MQ=255)
                                                                                            cGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATttctttc     >  2:10065167/1‑94 (MQ=255)
                                                                                             gggTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTccc    >  2:119955/1‑96 (MQ=255)
                                                                                             gggTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAAAAAGCAGGTCATTTCTTccc    >  1:1625943/1‑96 (MQ=255)
                                                                                              ggTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCa   >  2:6689276/1‑96 (MQ=255)
                                                                                              ggTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCa   <  2:10209437/96‑1 (MQ=255)
                                                                                               |                                                                                               
CTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGGGAAGGTGCGAATAAGCAGGTCATTTCTTCCCAA  >  NC_000913/1425466‑1425656

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.