Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,558,932 2 bp→GC coding (153‑154/831 nt) glpG ← GlpG

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,558,9320CG99.8% 1497.1 / NA 403V52L (GTG→CTG) glpGGlpG
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (188/214);  minor base T (0/1);  total (188/215)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*NC_0009133,558,9330GC99.8% 1502.3 / NA 404D51E (GAC→GAG) glpGGlpG
Reads supporting (aligned to +/- strand):  ref base G (1/0);  major base C (187/215);  minor base T (0/1);  total (188/216)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 446 total aligned reads displayed.

GGCGATAATGCAGGCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCACGTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAGGATAACACCCTGCGTC  >  NC_000913/3558842‑3559023
                                                                                          ||                                                                                          
ggCGATAATGCAGGCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCg                                                                                        <  1:3129143/96‑1 (MQ=255)
ggCGATAATGCAGGCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCg                                                                                        >  1:7001422/1‑96 (MQ=255)
ggCGATAATGCAGGCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCg                                                                                        <  1:12450206/96‑1 (MQ=255)
 gCGATAATGCAGGCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGc                                                                                       <  2:4505568/96‑1 (MQ=255)
  cGATAATGCAGGCCGCTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGcc                                                                                      <  2:11370677/96‑1 (MQ=255)
  cGATAATGCAGGCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGcc                                                                                      >  1:2076465/1‑96 (MQ=255)
  cGATAATGCAGGCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGcc                                                                                      >  2:5105069/1‑96 (MQ=255)
   gATAATGCAGGCCCCTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGccc                                                                                     <  1:11224222/96‑1 (MQ=255)
   gATAATGCAGGCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGccc                                                                                     <  1:13894276/96‑1 (MQ=255)
    aTAATGCAGGCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCCGGCTTTCGAGAAAACGCGCCAGCTCCGCCCg                                                                                    >  2:8042922/1‑96 (MQ=255)
      aaTGCAGGCCCCTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTa                                                                                  <  2:13823376/96‑1 (MQ=255)
       aTGCAGGCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGGTTTCGAGAAAACGCGCCAGCTCCGCCCGTAc                                                                                 >  1:9122555/1‑96 (MQ=255)
        tGCAGGCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTAcg                                                                                >  2:14374195/1‑96 (MQ=255)
         gCAGGCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATACCGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTAcgc                                                                               <  2:4075636/96‑1 (MQ=255)
         gCAGGCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGTTCCGCCCGTAcgc                                                                               <  1:10947068/96‑1 (MQ=255)
          cAGGCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCGGCCCGGTTTTCGAGAAAAAGCGCCAGCTCCGCCCGTAcgcg                                                                              >  1:8381440/1‑96 (MQ=255)
           aGGCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACgcgc                                                                             >  1:2869490/1‑96 (MQ=255)
             gCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTc                                                                           <  2:3141686/96‑1 (MQ=255)
             gCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTc                                                                           <  2:2506255/96‑1 (MQ=255)
                aCTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGc                                                                        <  2:570946/96‑1 (MQ=255)
                  tGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCt                                                                      <  2:11973091/96‑1 (MQ=255)
                   gCCGGTTTGCCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCACCCGTACGCGCTCGGCCTg                                                                     <  2:12779133/96‑1 (MQ=255)
                   gCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTg                                                                     >  2:8106729/1‑96 (MQ=255)
                    ccGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTgg                                                                    <  2:12944711/96‑1 (MQ=255)
                      ggTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGATTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGa                                                                  >  1:12170415/1‑96 (MQ=255)
                        tATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACt                                                                >  1:9720795/1‑96 (MQ=255)
                        tATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACt                                                                >  1:11608183/1‑96 (MQ=255)
                         aTGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTc                                                               >  1:11897176/1‑96 (MQ=255)
                         aTGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTc                                                               >  1:6300468/1‑96 (MQ=255)
                         aTGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTc                                                               <  2:3812907/96‑1 (MQ=255)
                          tgccctgcctgCCAGCTCGCCGCCAGATAACGCGGATGTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCa                                                              <  2:12258509/93‑1 (MQ=255)
                          tGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCa                                                              >  2:4770904/1‑96 (MQ=255)
                           ggCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCAt                                                             >  1:2704772/1‑96 (MQ=255)
                           ggCCTCCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCAt                                                             <  1:3931354/96‑1 (MQ=255)
                            gcctgcctGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATc                                                            <  1:5948798/96‑1 (MQ=255)
                             cctgcctgCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATcc                                                           <  1:2522932/96‑1 (MQ=255)
                              ctgcctgcCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCg                                                          <  1:11420651/96‑1 (MQ=255)
                              ctgcctgcCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCg                                                          <  2:679409/96‑1 (MQ=255)
                              ctgcctgcCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCg                                                          >  1:7677754/1‑96 (MQ=255)
                              ctgcctgcCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCg                                                          >  2:2057718/1‑96 (MQ=255)
                              cggcctgccAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCg                                                          <  1:12902438/94‑1 (MQ=255)
                                gcctgccAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCgcc                                                        >  2:2903512/1‑96 (MQ=255)
                                gcctgccAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCgcc                                                        <  1:9865191/96‑1 (MQ=255)
                                 cctgccAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCgcca                                                       >  2:1925595/1‑96 (MQ=255)
                                 cctgccAGCGCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCncca                                                       <  2:5328273/96‑1 (MQ=255)
                                  ctgccAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCgccag                                                      <  1:7951724/96‑1 (MQ=255)
                                   tgccAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAATACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCgccagc                                                     >  1:10432209/1‑96 (MQ=255)
                                   tgccAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCgccagc                                                     <  2:10806117/96‑1 (MQ=255)
                                   tgccAGCTCGACGCCAGATAACGCGGATCTGACGGGTTTTCGAGAAAACGCGCCAGCTCCGACCGTACGCGCTCGGCGTGGGGCTAATACgcaagc                                                     >  1:10703939/1‑96 (MQ=255)
                                    gccAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCgccagcc                                                    <  1:9329556/96‑1 (MQ=255)
                                    gccAGCACGCAGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCgccagcc                                                    <  1:4578592/96‑1 (MQ=255)
                                     ccAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCATCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCgccagcca                                                   <  1:13426583/96‑1 (MQ=255)
                                      cAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTCCGCGCTCGGCCTGGGACTCATCCGccagccag                                                  <  1:5335429/96‑1 (MQ=255)
                                      cAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGccagccag                                                  <  2:3482310/96‑1 (MQ=255)
                                      cAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGGACGCGCTCGGCCTGGCACTCATCCGccagccag                                                  >  2:9308205/1‑96 (MQ=255)
                                       aGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGa                                                 <  1:2300155/96‑1 (MQ=255)
                                        gCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGAc                                                >  2:5044363/1‑96 (MQ=255)
                                         cTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACa                                               >  1:10315045/1‑96 (MQ=255)
                                           cgccgcCAGATACCGCGGACCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATc                                             <  1:4153370/96‑1 (MQ=255)
                                           cgccgcCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATc                                             >  2:11587013/1‑96 (MQ=255)
                                           cgccgcCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATc                                             <  1:7311480/96‑1 (MQ=255)
                                               gccAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCtt                                         <  2:5575954/96‑1 (MQ=255)
                                               gccAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCtt                                         >  1:1276216/1‑96 (MQ=255)
                                                ccAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCttt                                        <  2:7391937/96‑1 (MQ=255)
                                                   gATAACGCGGATCTGCCGGGTTTTCGAGAAAACGGGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTggc                                     >  1:13614522/1‑95 (MQ=255)
                                                    aTAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGtt                                    <  2:1323511/96‑1 (MQ=255)
                                                     tAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTa                                   >  2:2339374/1‑96 (MQ=255)
                                                     tAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCACCAGCCAGACATCGCTTTGGTTa                                   >  1:10116350/1‑96 (MQ=255)
                                                      aaCGCGGATCTGCCGGGTTTTCGAGAAACCGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTAt                                  <  2:5844533/96‑1 (MQ=255)
                                                      aaCGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTAt                                  >  2:8567584/1‑96 (MQ=255)
                                                      aaCGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTAt                                  <  2:12114470/96‑1 (MQ=255)
                                                      aaCGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTCTGGTTAt                                  >  1:1776062/1‑96 (MQ=255)
                                                        cgcgGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTAtgt                                <  2:1237907/96‑1 (MQ=255)
                                                         gcgGATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTAtgtt                               <  1:4923403/96‑1 (MQ=255)
                                                           ggATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTAtgttgt                             >  1:6927526/1‑96 (MQ=255)
                                                           ggATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTAtgttgt                             >  1:5510873/1‑96 (MQ=255)
                                                            gATCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATgttgtt                            <  2:7523379/96‑1 (MQ=255)
                                                             aTCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGttgttg                           <  2:6574526/96‑1 (MQ=255)
                                                             aTCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGttgttg                           <  2:10297873/96‑1 (MQ=255)
                                                             aTCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGttgttg                           >  1:9554809/1‑96 (MQ=255)
                                                              tCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGa                          >  2:13713688/1‑96 (MQ=255)
                                                              tCTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGa                          <  1:14193631/96‑1 (MQ=255)
                                                               cTGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGaa                         <  2:7001422/96‑1 (MQ=255)
                                                                tGCCGGGTTTTCGAGAAACCGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAAt                        <  2:1016883/96‑1 (MQ=255)
                                                                tGCCGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAAt                        <  2:11198606/96‑1 (MQ=255)
                                                                  ccGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCg                      <  2:12558835/96‑1 (MQ=255)
                                                                   cGGGTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGt                     <  1:5785328/96‑1 (MQ=255)
                                                                     ggTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGa                   <  2:8858664/96‑1 (MQ=255)
                                                                      gTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAg                  <  2:6200191/96‑1 (MQ=255)
                                                                      gTTTTCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAg                  >  2:6361656/1‑96 (MQ=255)
                                                                       ttttCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAgg                 >  2:9517253/1‑96 (MQ=255)
                                                                       ttttCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAgg                 <  2:160494/96‑1 (MQ=255)
                                                                       ttttCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAgg                 <  1:340775/96‑1 (MQ=255)
                                                                        tttCGAGAAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAGGa                >  2:13064107/1‑96 (MQ=255)
                                                                             agaAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCCCTTTGGTTATGTTGTTGAATCGTGAGGATAaca           <  2:14057359/96‑1 (MQ=255)
                                                                              gaAAACGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAGGATAacac          >  1:8271388/1‑96 (MQ=255)
                                                                                 aaCGCGCCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAGGATAACACCCt       <  1:3201653/96‑1 (MQ=255)
                                                                                    gcgcCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAGGATAACACCCTGCg    <  1:13191496/96‑1 (MQ=255)
                                                                                    gcgcCAGCTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAGGATAACACCCTGCg    <  2:14169925/96‑1 (MQ=255)
                                                                                      cccACCTCCGCCCGTCCGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAGGATAACACCCTGCGTc  <  1:14408926/95‑1 (MQ=255)
                                                                                          ||                                                                                          
GGCGATAATGCAGGCCACTGCCGGTATGGCCTGCCTGCCAGCTCGCCGCCAGATAACGCGGATCTGCCGGGTTTTCGAGAAAACGCGCCACGTCCGCCCGTACGCGCTCGGCCTGGGACTCATCCGCCAGCCAGACATCGCTTTGGTTATGTTGTTGAATCGTGAGGATAACACCCTGCGTC  >  NC_000913/3558842‑3559023

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑