BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,236,177	Δ1 bp	intergenic (+239/‑45)	ygjR → / → ygjT	hypothetical protein/putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,236,176	0	G	.	100.0%	1058.9 / NA	227	intergenic (+238/‑46)	ygjR/ygjT	hypothetical protein/putative transport protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (110/117); total (110/117)

Only 100 of 243 total aligned reads displayed.

GGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTG  >  NC_000913/3236084‑3236264

ggCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTg                                                                                          >  2:4206888/1‑93 (MQ=255)

 gCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTga                                                                                         <  1:1578029/93‑2 (MQ=255)

 gCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTga                                                                                         <  1:2221093/93‑2 (MQ=255)

  cAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTgac                                                                                        <  2:5192604/93‑3 (MQ=255)

  cAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTgac                                                                                        <  1:4883961/93‑3 (MQ=255)

    aCCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTgacgt                                                                                      >  1:2693022/1‑89 (MQ=255)

     cccGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTc                                                                                    <  1:1451677/93‑1 (MQ=255)

     cccGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTc                                                                                    >  2:4365180/1‑93 (MQ=255)

      ccGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCt                                                                                   <  1:5134453/93‑1 (MQ=255)

       cGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCtt                                                                                  <  1:945481/93‑1 (MQ=255)

         aaaGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTcc                                                                                >  2:5503275/1‑93 (MQ=255)

           aGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGa                                                                              <  2:118234/93‑1 (MQ=255)

           aGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGa                                                                              <  2:1690496/93‑1 (MQ=255)

            ggAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGAc                                                                             >  2:3210816/1‑93 (MQ=255)

             gAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACg                                                                            <  2:45382/93‑1 (MQ=255)

              aaTACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGt                                                                           <  2:4561911/93‑1 (MQ=255)

                 aCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTgg                                                                        >  2:2918389/1‑93 (MQ=255)

                     aGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGt                                                                    >  1:5465228/1‑93 (MQ=255)

                      gACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGtt                                                                   <  2:2406833/93‑1 (MQ=255)

                       aCGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGttt                                                                  <  2:4030396/93‑1 (MQ=255)

                        cGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGtttt                                                                 >  1:4236762/1‑93 (MQ=255)

                          tATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGtttttt                                                               >  2:5228364/1‑93 (MQ=255)

                          tATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGtttttt                                                               <  1:3741505/93‑1 (MQ=255)

                          tATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGtttttt                                                               >  2:4348997/1‑93 (MQ=255)

                          tATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGtttttt                                                               >  2:5396669/1‑93 (MQ=255)

                           aTTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGttttttt                                                              <  2:5621944/93‑1 (MQ=255)

                           aTTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGttttttt                                                              >  1:2737121/1‑93 (MQ=255)

                            ttCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTa                                                             <  1:3116746/93‑1 (MQ=255)

                            ttCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTa                                                             <  1:3005838/93‑1 (MQ=255)

                            ttCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCCAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTa                                                             <  2:4689207/93‑1 (MQ=255)

                             tCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTAt                                                            >  1:1948494/1‑93 (MQ=255)

                               cTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTAtgt                                                          <  1:1647915/93‑1 (MQ=255)

                                ttttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTAtgtg                                                         >  2:6001847/1‑93 (MQ=255)

                                 tttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATgtgt                                                        >  1:2633628/1‑93 (MQ=255)

                                  ttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTa                                                       >  1:5053808/1‑93 (MQ=255)

                                  ttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTa                                                       >  2:650300/1‑93 (MQ=255)

                                  ttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTa                                                       <  2:540925/93‑1 (MQ=255)

                                    ttgttgTAAGTGAGACCTTGCCGGAAGGCGCGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAg                                                     <  2:5760531/93‑1 (MQ=255)

                                    ttgttgTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAg                                                     <  1:6025519/93‑1 (MQ=255)

                                     tgttgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAgg                                                    >  2:2338383/1‑93 (MQ=255)

                                     tgttgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAgg                                                    >  1:3383597/1‑93 (MQ=255)

                                      gttgtAAGTGAGTCCTTGCCGGAAGGCGAGGTCTATGCATAAGAAGCAGCGGCT‑GACGGCTTCCGACGTTGGCCGTTTTTTTATGTGTGAGGa                                                   >  1:5807199/1‑93 (MQ=255)

                                       ttgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGaa                                                  >  1:1320873/1‑93 (MQ=255)

                                           aaGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTc                                              <  2:1483718/93‑1 (MQ=255)

                                             gTGAGACCTTGCCGGTAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAAATTCtc                                            <  1:5486404/93‑2 (MQ=255)

                                              tGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCtct                                           >  1:3678939/1‑91 (MQ=255)

                                              tGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTAt                                           >  2:500956/1‑93 (MQ=255)

                                              tGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTAt                                           <  2:2635807/93‑1 (MQ=255)

                                               gagaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATg                                          >  2:4801150/1‑93 (MQ=255)

                                               gagaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATg                                          <  1:3999604/93‑1 (MQ=255)

                                                agaCCTTGCCGGAAGGCGTGGACTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGCTTTTTTATGTGTAAGGGACTTCTATGa                                         >  2:696200/1‑93 (MQ=255)

                                                agaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGa                                         <  2:1019566/93‑1 (MQ=255)

                                                agaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGa                                         <  2:1627704/93‑1 (MQ=255)

                                                 gaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGaa                                        >  2:4934745/1‑93 (MQ=255)

                                                   ccTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATa                                      <  1:5591994/93‑1 (MQ=255)

                                                    cTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATAc                                     <  2:617561/93‑1 (MQ=255)

                                                     ttGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACt                                    >  2:2291781/1‑93 (MQ=255)

                                                     ttGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACt                                    >  1:4348871/1‑93 (MQ=255)

                                                     ttGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACt                                    >  2:3071922/1‑93 (MQ=255)

                                                     ttGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACt                                    >  1:1774661/1‑93 (MQ=255)

                                                     ttGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACt                                    >  1:3478619/1‑93 (MQ=255)

                                                       gCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTTTATGCATACtct                                  >  2:1966073/1‑91 (MQ=255)

                                                        ccGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTc                                 <  1:4502838/93‑1 (MQ=255)

                                                        ccGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTc                                 >  1:5337534/1‑93 (MQ=255)

                                                          ggAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCgg                               >  2:3358407/1‑93 (MQ=255)

                                                          ggAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCgg                               >  2:5272628/1‑93 (MQ=255)

                                                           gAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGc                              >  1:1032155/1‑93 (MQ=255)

                                                            aaGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTTGGCa                             >  1:4620785/1‑93 (MQ=255)

                                                            aaGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCa                             <  1:4765459/93‑1 (MQ=255)

                                                             aGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCAc                            >  2:318571/1‑93 (MQ=255)

                                                              ggCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACg                           >  2:720505/1‑93 (MQ=255)

                                                               gCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGc                          <  1:3604067/93‑1 (MQ=255)

                                                                 gAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCg                        <  2:39184/93‑1 (MQ=255)

                                                                 gAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCg                        >  2:3563084/1‑93 (MQ=255)

                                                                  gtctCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTGGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACGGTCGGCACGCCGt                       <  1:5396443/90‑1 (MQ=255)

                                                                  aGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGt                       <  2:2817853/93‑1 (MQ=255)

                                                                  aGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGt                       >  1:4576668/1‑93 (MQ=255)

                                                                   ggTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGtt                      <  2:3619194/93‑1 (MQ=255)

                                                                    gTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTg                     <  2:3828531/93‑1 (MQ=255)

                                                                     tCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGc                    >  2:6029776/1‑93 (MQ=255)

                                                                        aTGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTAt                 <  1:2647334/93‑1 (MQ=255)

                                                                        aTGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTAt                 >  2:1828129/1‑93 (MQ=255)

                                                                         tGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATg                >  2:2689246/1‑93 (MQ=255)

                                                                          gCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATgg               >  2:3897653/1‑93 (MQ=255)

                                                                          gCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATgg               <  1:3812905/93‑1 (MQ=255)

                                                                            aTAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATgggg             <  1:1387793/93‑1 (MQ=255)

                                                                             tAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGc            >  1:2861893/1‑93 (MQ=255)

                                                                                aaaGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGa         <  1:5342287/93‑1 (MQ=255)

                                                                                aaaGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGa         >  2:5883597/1‑93 (MQ=255)

                                                                                  agcagcGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGAtt       <  1:639069/93‑1 (MQ=255)

                                                                                  agcagcGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGAtt       <  1:3926172/93‑1 (MQ=255)

                                                                                  agcagcGGCT‑GACGTCTTACGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGAtt       <  1:3534266/93‑1 (MQ=255)

                                                                                   gcagcGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTc      <  2:115567/93‑1 (MQ=255)

                                                                                   gcagcGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTc      >  2:566015/1‑93 (MQ=255)

                                                                                   gcagcGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTc      <  2:1450693/93‑1 (MQ=255)

                                                                                   gcagcGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTc      >  1:2365737/1‑93 (MQ=255)

                                                                                   gcagcGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTc      >  2:4136296/1‑93 (MQ=255)

                                                                                      gcGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCt   >  1:6140809/1‑93 (MQ=255)

                                                                                      gcGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCt   >  2:3432041/1‑93 (MQ=255)

                                                                                       cGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtg  <  2:1360887/93‑1 (MQ=255)

GGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTG  >  NC_000913/3236084‑3236264

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`