BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,554,113	Δ1 bp	coding (372/396 nt)	yhgKJ ←	RNA phosphage cyclase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,554,113	0	C	.	99.1%	989.7 / ‑0.6	217	coding (372/396 nt)	yhgKJ	RNA phosphage cyclase
Reads supporting (aligned to +/- strand): ref base C (0/0); major base . (104/111); minor base G (1/1); total (105/112)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01

Only 100 of 237 total aligned reads displayed.

TGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑G‑AGGCGGCGCCGACGGGTTATCGGTCGCCG‑CGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGC  >  NC_000913/3554026‑3554199

tGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGt‑gccg‑c                                                                                   <  2:5106125/93‑1 (MQ=255)

 ggTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAACTCC‑GCAGGCGGCGCCGACGGGTTATCGGt‑gccg‑cc                                                                                  <  1:6116065/93‑2 (MQ=255)

 ggTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGt‑gccg‑cc                                                                                  >  1:5745745/1‑92 (MQ=255)

 ggTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGt‑gccg‑cc                                                                                  <  1:3271546/93‑2 (MQ=255)

  gTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGt‑gccg‑ccg                                                                                 >  2:5960364/1‑91 (MQ=255)

      gCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCa                                                                              <  2:368950/93‑1 (MQ=255)

      gCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCa                                                                              >  1:3595083/1‑93 (MQ=255)

       cTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCAc                                                                             <  2:552618/93‑1 (MQ=255)

       cTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCAc                                                                             <  2:140838/93‑1 (MQ=255)

        tgatgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACt                                                                            <  1:3614906/93‑1 (MQ=255)

        tgatgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACt                                                                            <  2:2803082/93‑1 (MQ=255)

        tgatgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCAGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACt                                                                            >  1:4649155/1‑93 (MQ=255)

         gatgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGGGCCGACGGGTTATCGGT‑GCCGCCGCTCACtt                                                                           >  2:2456030/1‑93 (MQ=255)

         gatgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCTGCCGCTCACtt                                                                           >  1:2262459/1‑93 (MQ=255)

         gatgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACtt                                                                           <  2:1704437/93‑1 (MQ=255)

         gatgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGACGACGGGTTGTCGGT‑GCCGCCGCTCACtt                                                                           >  1:2146772/1‑93 (MQ=255)

           tgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGTGGCGC‑CGCTCACTTCa                                                                         >  2:72051/1‑93 (MQ=255)

            gaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCaa                                                                        >  1:4330893/1‑93 (MQ=255)

             aaTTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAac                                                                       <  2:2518328/93‑1 (MQ=255)

              aTTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAaca                                                                      >  1:4044213/1‑93 (MQ=255)

              aTTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAaca                                                                      >  1:5152306/1‑93 (MQ=255)

              aTTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAaca                                                                      <  1:5792925/93‑1 (MQ=255)

              aTTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAaca                                                                      >  1:1093900/1‑93 (MQ=255)

                tCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACAcg                                                                    >  1:2621689/1‑93 (MQ=255)

                 ccTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACAcgc                                                                   >  1:1369888/1‑93 (MQ=255)

                   tATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGa                                                                 >  2:2341466/1‑93 (MQ=255)

                    aTTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGaa                                                                <  2:2846502/93‑1 (MQ=255)

                    aTTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGaa                                                                <  2:908857/93‑1 (MQ=255)

                    aTTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGaa                                                                >  1:3229691/1‑93 (MQ=255)

                     ttttCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAg                                                               <  1:2528060/93‑1 (MQ=255)

                      tttCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAgg                                                              <  1:3819659/93‑1 (MQ=255)

                      tttCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCCAAgg                                                              >  2:4206211/1‑93 (MQ=255)

                       ttCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGt                                                             <  1:203210/93‑1 (MQ=255)

                       ttCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGt                                                             <  2:3843900/93‑1 (MQ=255)

                        tCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTc                                                            >  1:2823921/1‑93 (MQ=255)

                        tCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGAGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAAAACGCGAAGGTc                                                            >  2:1128360/1‑93 (MQ=255)

                          gCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCa                                                          >  1:4117577/1‑93 (MQ=255)

                          gCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCa                                                          >  1:5446225/1‑93 (MQ=255)

                          gCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCa                                                          <  1:4616587/93‑1 (MQ=255)

                           ccAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCAt                                                         <  1:5036629/93‑1 (MQ=255)

                             agcagcGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCg                                                       >  2:1935657/1‑93 (MQ=255)

                             agcagcGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCg                                                       <  2:398096/93‑1 (MQ=255)

                             agcagcGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCg                                                       >  1:975540/1‑93 (MQ=255)

                              gcagcGGCTCCAGCACCCGGCGGATAAAACCC‑GCAGGCGGCGGCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCgg                                                      <  2:4904803/93‑1 (MQ=255)

                               cagcGGCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGc                                                     >  2:2525851/1‑93 (MQ=255)

                               cagcGGCCCCAGCCCCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGc                                                     <  1:1214809/93‑1 (MQ=255)

                                 ggcgCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACGTCAACACGCGAAGGTCCATCGGCaa                                                   <  2:4243033/90‑1 (MQ=255)

                                    gCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGCAGGTCCATCGGCAAAcc                                                >  1:3325581/1‑93 (MQ=255)

                                    gCTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCCAAcc                                                >  2:2364643/1‑93 (MQ=255)

                                     cTCCAGCACCCGGCGGATAAAATCT‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACca                                               >  1:3767623/1‑93 (MQ=255)

                                     cTCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACca                                               <  1:4729534/93‑1 (MQ=255)

                                      tCCAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACcac                                              <  1:5925167/93‑1 (MQ=255)

                                       ccAGCCCCCGGCGGAGAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACcaca                                             <  2:619616/93‑1 (MQ=255)

                                       ccAGCACCCGGCGGATAAAATCCTC‑AGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACcaca                                             <  1:1774345/93‑1 (MQ=255)

                                       ccAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACcaca                                             <  2:3942790/93‑1 (MQ=255)

                                        cAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGCCGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAg                                            <  1:5668838/93‑1 (MQ=255)

                                        cAGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAg                                            <  2:5788909/93‑1 (MQ=255)

                                         agaccccGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAgc                                           <  1:367236/89‑1 (MQ=255)

                                         aGCACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAgc                                           >  2:5374872/1‑93 (MQ=255)

                                           cACCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAgcgc                                         <  2:1081765/93‑1 (MQ=255)

                                            ccccGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGcgcg                                        <  2:3572140/92‑1 (MQ=255)

                                            aCCCGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGcgcg                                        <  1:6129880/93‑1 (MQ=255)

                                              ccGGCGGATAAAATCC‑GCAGTCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCggg                                      <  1:2060123/93‑1 (MQ=255)

                                              ccGGCGGATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCggg                                      >  2:1023053/1‑93 (MQ=255)

                                               cggcggATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGgc                                     <  2:5291463/93‑1 (MQ=255)

                                               cggcggATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGgc                                     <  2:4634965/93‑1 (MQ=255)

                                                ggcggATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGgca                                    <  1:5822580/93‑1 (MQ=255)

                                                 gcggATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGgcag                                   >  1:5541446/1‑93 (MQ=255)

                                                  cggATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGgcagc                                  >  1:5646944/1‑93 (MQ=255)

                                                   caaTAAAATCC‑GCAGGCGGCGCCGAAGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGgcagca                                 <  1:5201813/91‑1 (MQ=255)

                                                    gATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCAc                                >  2:2149066/1‑93 (MQ=255)

                                                    gATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCAc                                <  2:839045/93‑1 (MQ=255)

                                                    gATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCAc                                >  1:180724/1‑93 (MQ=255)

                                                    gATAAAATCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCAc                                >  1:5382920/1‑93 (MQ=255)

                                                        aaaTCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGtt                            >  1:2376141/1‑93 (MQ=255)

                                                        aaaTCC‑GCAGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGtt                            <  2:3132004/93‑1 (MQ=255)

                                                             ccgcaGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTgca                        <  2:5683959/89‑1 (MQ=255)

                                                               gcaGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTgcagc                      >  1:4540780/3‑93 (MQ=255)

                                                               gcaGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTgcagc                      <  1:3128080/91‑1 (MQ=255)

                                                                 aGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCAc                    <  2:422001/93‑1 (MQ=255)

                                                                 aGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCAc                    >  1:4209814/1‑93 (MQ=255)

                                                                 aGGCGGCGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCAc                    >  1:2737028/1‑93 (MQ=255)

                                                                  ggcggcGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCAcc                   <  1:289894/93‑1 (MQ=255)

                                                                  ggcggcGCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCAcc                   <  1:796386/93‑1 (MQ=255)

                                                                    cggcgCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAg                 <  1:2462803/93‑1 (MQ=255)

                                                                    cggcgCCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAg                 <  2:461439/93‑1 (MQ=255)

                                                                       cgcCGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGt              <  1:1934202/93‑1 (MQ=255)

                                                                         ccGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGGCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTAc            >  2:3672220/1‑93 (MQ=255)

                                                                          cGACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACa           <  2:4322286/93‑1 (MQ=255)

                                                                           gACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACaa          >  2:4789332/1‑93 (MQ=255)

                                                                           gACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACaa          <  1:2694482/93‑1 (MQ=255)

                                                                           gACGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACaa          >  2:1310621/1‑93 (MQ=255)

                                                                            aCGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAAc         <  2:3912960/93‑1 (MQ=255)

                                                                             cGGGTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACt        >  2:4467410/1‑93 (MQ=255)

                                                                              gggTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACtt       >  1:4944580/1‑93 (MQ=255)

                                                                              gggTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACtt       >  1:2721045/1‑93 (MQ=255)

                                                                                gTTATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTcc     <  1:722257/93‑1 (MQ=255)

                                                                                  tATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCgg   <  2:3010776/93‑1 (MQ=255)

                                                                                  tATCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATAGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCgg   <  1:519353/93‑1 (MQ=255)

                                                                                   aTCGGT‑GCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGgc  <  2:4191921/93‑1 (MQ=255)

TGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCC‑G‑AGGCGGCGCCGACGGGTTATCGGTCGCCG‑CGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGC  >  NC_000913/3554026‑3554199

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`