Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,477,041 Δ1 bp intergenic (‑151/‑269) b4256 ← / → yjgN hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,477,0410G.99.4% 823.6 / ‑2.2 177intergenic (‑151/‑269)b4256/yjgNhypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base . (39/137);  minor base A (1/0);  total (40/137)
Fisher's exact test for biased strand distribution p-value = 2.26e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.44e-01

Only 100 of 182 total aligned reads displayed.

CGTCAAGATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCGAGGATTATCCTGCAGCGTCAGGCGACGATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAAT  >  NC_000913/4476953‑4477127
                                                                                        |                                                                                       
cGTCAAGATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGAt                                                                                    <  2:2210339/93‑1 (MQ=255)
  tCAAGATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTa                                                                                  <  1:4694726/93‑1 (MQ=255)
   cAAGATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTAt                                                                                 >  2:5733415/1‑93 (MQ=255)
   cAAGATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTAt                                                                                 >  1:3623473/1‑93 (MQ=255)
     aGATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATcc                                                                               <  2:165305/93‑1 (MQ=255)
      gATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCt                                                                              <  1:4131953/93‑1 (MQ=255)
      gATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCt                                                                              <  1:3578357/93‑1 (MQ=255)
      aaTTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCt                                                                              <  2:3668017/92‑1 (MQ=255)
       aTTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACAGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATTCTg                                                                             >  2:3475781/1‑93 (MQ=255)
         tCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCa                                                                           <  2:4412707/93‑1 (MQ=255)
         tCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCa                                                                           <  2:3027095/93‑1 (MQ=255)
          cGGTTCTGCGACGGTGTTGCCTTTATCAGCGGTAAGACCGTATTCTGCGGATACCTGACGAATGACGCGGGCGATAGCAGTATTATTCTGCAg                                                                          >  1:5491459/1‑93 (MQ=255)
          cGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAg                                                                          <  1:1873270/93‑1 (MQ=255)
              tCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTc                                                                      <  2:872148/93‑1 (MQ=255)
              tCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTc                                                                      >  1:3229332/1‑93 (MQ=255)
              tCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTc                                                                      <  1:1472348/93‑1 (MQ=255)
               cGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCa                                                                     <  2:1904274/93‑1 (MQ=255)
               cGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCa                                                                     <  1:3864360/93‑1 (MQ=255)
                ggCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAg                                                                    <  2:2056305/93‑1 (MQ=255)
                 gCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAgg                                                                   <  2:860900/93‑1 (MQ=255)
                    aCGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGcga                                                                >  1:265568/1‑93 (MQ=255)
                    aCGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGcga                                                                <  2:4841865/93‑1 (MQ=255)
                     cGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATCCCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGcgac                                                               <  1:4592738/93‑1 (MQ=255)
                     cGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGcgac                                                               <  1:5693957/93‑1 (MQ=255)
                       gtgtAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGcgacgc                                                             >  1:890631/1‑92 (MQ=255)
                        tgtAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGcgacgca                                                            <  1:2522418/93‑3 (MQ=255)
                         gtAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGcgacgcat                                                           >  2:3810202/1‑90 (MQ=255)
                         gtAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGAAGGATTATCCTGCAGCGTCAGGcgacgcat                                                           >  2:5150771/1‑90 (MQ=255)
                          tAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGcgacgcatt                                                          <  1:1023975/93‑5 (MQ=255)
                             ccTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACa                                                       <  2:4846359/93‑1 (MQ=255)
                              cTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAg                                                      <  2:1716025/93‑1 (MQ=255)
                               tttATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAgg                                                     >  2:4222307/1‑93 (MQ=255)
                                  aTCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGa                                                  <  1:2845854/93‑1 (MQ=255)
                                  aTCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGa                                                  <  2:1293318/93‑1 (MQ=255)
                                   tCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGAt                                                 <  1:2688678/93‑1 (MQ=255)
                                      gCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTgc                                              <  2:375763/93‑1 (MQ=255)
                                      gCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTgc                                              <  1:747458/93‑1 (MQ=255)
                                       cGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTgcg                                             >  1:5123405/1‑93 (MQ=255)
                                        ggTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTgcgg                                            <  2:2409594/93‑1 (MQ=255)
                                         gTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTgcggc                                           <  2:3293350/93‑1 (MQ=255)
                                          tAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTgcggcg                                          >  2:3207245/1‑93 (MQ=255)
                                           aaGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATGACAGGTGATTGCGgcgc                                         >  2:5496684/1‑93 (MQ=255)
                                             gACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCaa                                       >  2:1356006/1‑93 (MQ=255)
                                              aCCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAAt                                      <  2:1407206/93‑1 (MQ=255)
                                              aCCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAAt                                      <  1:4410430/93‑1 (MQ=255)
                                               ccGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATg                                     <  2:4683849/93‑1 (MQ=255)
                                               ccGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATg                                     >  1:2138838/1‑93 (MQ=255)
                                                cGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGt                                    >  2:2010157/1‑93 (MQ=255)
                                                cGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGt                                    <  2:2191626/93‑1 (MQ=255)
                                                cGTATTCGGAGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGt                                    <  2:4753549/93‑1 (MQ=255)
                                                 gTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGtt                                   <  1:5740994/93‑1 (MQ=255)
                                                 ctATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGtt                                   <  2:4126717/92‑1 (MQ=255)
                                                  tATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTa                                  <  2:3202802/93‑1 (MQ=255)
                                                  tATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTa                                  <  2:4364537/93‑1 (MQ=255)
                                                  tATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTa                                  <  2:2790862/93‑1 (MQ=255)
                                                   aTTCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTAt                                 <  1:1152014/93‑1 (MQ=255)
                                                     tCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTc                               <  2:2615909/93‑1 (MQ=255)
                                                     tCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTc                               <  2:5424552/93‑1 (MQ=255)
                                                     tCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTc                               >  2:4145937/1‑93 (MQ=255)
                                                     tCGGCGGATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGGTATTc                               >  2:618923/1‑93 (MQ=255)
                                                      cggcggATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCa                              <  2:6131499/93‑1 (MQ=255)
                                                      cggcggATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCa                              <  2:730729/93‑1 (MQ=255)
                                                      cggcggATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCa                              <  2:1456268/93‑1 (MQ=255)
                                                      cggcggATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCa                              <  1:5970376/93‑1 (MQ=255)
                                                       ggcggATACCTGACGAGTGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGCCGCAATGTTATTCAt                             <  1:888173/93‑1 (MQ=255)
                                                       ggcggATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCAt                             <  2:3641742/93‑1 (MQ=255)
                                                        gcggATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATa                            <  1:5858835/93‑1 (MQ=255)
                                                        gcggATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATa                            <  2:5327323/93‑1 (MQ=255)
                                                         cggATACCTGACGAATGACGCGGGCGATAGCAGGCTTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAg                           <  2:3884643/93‑1 (MQ=255)
                                                          ggATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGt                          >  2:643346/1‑93 (MQ=255)
                                                          ggATACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGt                          <  1:3110409/93‑1 (MQ=255)
                                                            aTACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTTATTGCGGCGCAATGTTATTCATAGttt                        <  1:2218652/93‑1 (MQ=255)
                                                            aTACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTTATTGCGGCGCAATGTTATTCATAGttt                        <  1:403222/93‑1 (MQ=255)
                                                            aTACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGttt                        <  1:5950478/93‑1 (MQ=255)
                                                            aTACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGttt                        <  2:5644526/93‑1 (MQ=255)
                                                             tACCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTa                       >  2:1853583/1‑93 (MQ=255)
                                                              aCCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGTCGCAATGTTATTCATAGTTTaa                      <  1:4165944/93‑1 (MQ=255)
                                                              aCCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTaa                      <  2:3368304/93‑1 (MQ=255)
                                                               ccTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAAc                     <  2:4324973/93‑1 (MQ=255)
                                                                cTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAAcc                    >  2:1106949/1‑93 (MQ=255)
                                                                cTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAAcc                    <  2:4266074/93‑1 (MQ=255)
                                                                  gACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCa                  >  2:4237752/1‑93 (MQ=255)
                                                                   aCGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaa                 <  2:5772118/93‑1 (MQ=255)
                                                                   aCGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaa                 <  1:2993505/93‑1 (MQ=255)
                                                                    cGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaat                <  2:1987124/93‑1 (MQ=255)
                                                                    cGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaat                <  2:2285187/93‑1 (MQ=255)
                                                                    cGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaat                <  1:2766920/93‑1 (MQ=255)
                                                                    cGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaat                <  1:1696315/93‑1 (MQ=255)
                                                                     gAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCACTGTTATTCATAGTTTAACCCaata               <  1:1954398/93‑1 (MQ=255)
                                                                     gAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaata               <  1:2439663/93‑1 (MQ=255)
                                                                      aaTGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataa              <  1:1921312/93‑1 (MQ=255)
                                                                        tGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaa            >  2:1336139/1‑93 (MQ=255)
                                                                        tGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaa            <  1:5821677/93‑1 (MQ=255)
                                                                        tGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGCTTAACCCaataaaa            >  2:2698536/1‑93 (MQ=255)
                                                                         gACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaaa           <  2:5929031/93‑1 (MQ=255)
                                                                          aCGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaaat          <  1:4686750/93‑1 (MQ=255)
                                                                          aCGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaaat          <  1:1076269/93‑1 (MQ=255)
                                                                             cgGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataaaaataaa       <  2:3825205/93‑1 (MQ=255)
                                                                              gggCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAg      <  2:4871316/93‑1 (MQ=255)
                                                                              gggCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAg      <  2:4450555/93‑1 (MQ=255)
                                                                                        |                                                                                       
CGTCAAGATTCGGATCGGCGACGGTGTAGCCTTTATCAGCGGTAAGACCGTATTCGGCGGATACCTGACGAATGACGCGGGCGATAGCGAGGATTATCCTGCAGCGTCAGGCGACGATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAAT  >  NC_000913/4476953‑4477127

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: