| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,099,661 | (A)5→6 | intergenic (‑19/+164) | yggN ← / ← b2959 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,099,656 | 1 | . | A | 98.8% | 939.2 / 2.5 | 249 | intergenic (‑14/+169) | yggN/b2959 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (3/0); new base A (111/135); total (114/135) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.46e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.11e-01 | |||||||||||
Only 100 of 274 total aligned reads displayed.
TGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑AAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCT > NC_000913/3099564‑3099745 | gACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑a < 2:5641751/93‑1 (MQ=255) cGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑aaa < 2:4081313/93‑1 (MQ=255) cGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑aaa < 1:1658710/93‑1 (MQ=255) gCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑aaa‑a < 2:1708483/93‑1 (MQ=255) tGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑aaa‑aaa > 1:3705566/1‑92 (MQ=255) gCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑aaa‑aaat > 2:2607533/1‑91 (MQ=255) aCTGGTAGGCGGCGTGAGCGGTCATGGCCGTCACTGAAAGTGCTGCCGCCAGCAGGATTTTGCGCATCATAGTCTTCCCTCAAG‑aaa‑aaatca < 1:1754070/93‑5 (MQ=255) tGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAgg < 1:5552502/93‑1 (MQ=255) tGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAgg > 2:2140992/1‑93 (MQ=255) tGGTAGTCGGCGTGAGCGGTCATTGCCGGCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAgg < 2:1839275/93‑1 (MQ=255) gTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGcc < 2:5589484/93‑1 (MQ=255) tAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCa < 2:3327401/93‑1 (MQ=255) tAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCa > 1:2671237/1‑93 (MQ=255) gTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGc < 1:6142940/93‑1 (MQ=255) gTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGc < 1:5228442/93‑1 (MQ=255) tCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCa < 1:2128720/93‑1 (MQ=255) tCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCa < 1:1285513/93‑1 (MQ=255) tCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCa > 2:2718144/1‑93 (MQ=255) ggCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCAtt < 1:1698257/93‑1 (MQ=255) ggCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCAtt < 1:4616832/93‑1 (MQ=255) cGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTg < 2:2459986/93‑1 (MQ=255) gTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGc < 1:2793589/93‑1 (MQ=255) gTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGc > 1:5379296/1‑93 (MQ=255) tGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCt > 2:4606573/1‑93 (MQ=255) tGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCt < 1:4136110/93‑1 (MQ=255) tGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCt > 2:6116039/1‑93 (MQ=255) tGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCt < 2:5233758/93‑1 (MQ=255) gAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTg < 2:3634754/93‑1 (MQ=255) gAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTg < 1:4408059/93‑1 (MQ=255) cGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGcc < 2:1134260/93‑1 (MQ=255) cGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑AAAGAATCAGGCCAGCATTTGCTGGcc > 1:3486109/1‑93 (MQ=255) gTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGcccc > 2:2380154/1‑93 (MQ=255) gTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGcccc > 1:3382676/1‑93 (MQ=255) gTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGcccc < 2:3704669/93‑1 (MQ=255) tCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCa < 1:986008/93‑1 (MQ=255) tCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCa > 1:2891928/1‑93 (MQ=255) aTTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGa > 2:3239937/1‑93 (MQ=255) aTTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGa > 2:3942283/1‑93 (MQ=255) ttGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGAt > 2:3422999/1‑93 (MQ=255) ttGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGAt < 1:3203011/93‑1 (MQ=255) ttGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGAt > 2:3574225/1‑93 (MQ=255) tGCCGTCACTTAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGAtt < 2:2773768/93‑1 (MQ=255) gTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATa < 1:2511716/93‑1 (MQ=255) tCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATaa > 1:1198023/1‑93 (MQ=255) tCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATaa > 2:5828154/1‑93 (MQ=255) tCACTGAAAGTGCTGCCCCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATaa < 2:2790274/93‑1 (MQ=255) gAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAg < 1:5313797/93‑1 (MQ=255) gAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAg > 2:5531598/1‑93 (MQ=255) aaaGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGt < 1:4198610/93‑1 (MQ=255) aaGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTa < 2:4374757/93‑1 (MQ=255) aaGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTa < 2:2420812/93‑1 (MQ=255) aGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTAc < 2:3076145/93‑1 (MQ=255) aGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTAc < 1:477221/93‑1 (MQ=255) aGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTAc < 1:3057847/93‑1 (MQ=255) gTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTAcg < 2:603236/93‑1 (MQ=255) gctgcCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTAAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTAcgcg < 2:4456333/93‑1 (MQ=255) ctgcCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGt > 2:148593/1‑93 (MQ=255) gccgccAGCAGCATTTTGCGCATCATAGTCTTCGCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGttt > 1:567016/1‑93 (MQ=255) gccgccAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGttt > 2:1963540/1‑93 (MQ=255) cgccAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTc < 1:721115/93‑1 (MQ=255) gccAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTcc > 1:145197/1‑93 (MQ=255) gccAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTcc < 2:4290450/93‑1 (MQ=255) ccAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCa > 2:5016167/1‑93 (MQ=255) ccAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCa < 1:4705860/93‑1 (MQ=255) agcagcATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATg > 1:3004756/1‑93 (MQ=255) agcagcATTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATg > 1:1109539/1‑93 (MQ=255) agcaTTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCg > 2:826224/1‑93 (MQ=255) gcaTTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCgg > 2:5722843/1‑93 (MQ=255) caTTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGa > 2:2535285/1‑93 (MQ=255) caTTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGa < 1:4884571/93‑1 (MQ=255) aTTTTGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGAt > 2:903819/1‑93 (MQ=255) ttttGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATg > 2:4500677/1‑93 (MQ=255) ttttGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATg > 2:1546906/1‑93 (MQ=255) ttttGCGCATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATg > 2:4753488/1‑93 (MQ=255) cgcATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATgcggcg > 1:227002/1‑93 (MQ=255) gcATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATgcggcgc > 1:5027301/1‑92 (MQ=255) gcATCATAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATgcggcgc > 1:1519828/1‑92 (MQ=255) catcatAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATgcggcgca > 2:3187421/1‑91 (MQ=255) catcatAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTa < 2:92917/93‑1 (MQ=255) atcatAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCaa > 1:3310038/1‑93 (MQ=255) tcatAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTaaa > 2:2253047/1‑93 (MQ=255) tcatAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCaaa < 2:5368994/93‑1 (MQ=255) tcatAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCAAtctgg > 2:1218752/1‑76 (MQ=255) catAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAac > 1:3865508/1‑93 (MQ=255) catAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAac < 2:4186517/93‑1 (MQ=255) atAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTaaaac > 1:1907267/1‑91 (MQ=255) atAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAaca > 1:2856163/1‑93 (MQ=255) atAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAaca > 1:4509366/1‑93 (MQ=255) tAGTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAacac > 1:2728444/1‑93 (MQ=255) gTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCt > 1:214860/1‑93 (MQ=255) gTCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCt > 2:5132281/1‑93 (MQ=255) tCTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCtt < 1:3587699/93‑1 (MQ=255) cTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTa > 2:5771561/1‑93 (MQ=255) cTTCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTa < 1:1017048/93‑1 (MQ=38) ttCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTAt < 1:5844033/93‑1 (MQ=255) tCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATc > 1:2088979/1‑93 (MQ=255) tCCCTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATc > 2:2072259/1‑93 (MQ=255) cccTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATcc > 1:3138277/1‑93 (MQ=255) cccTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATcc > 1:5149078/1‑93 (MQ=255) cccTCAAGAAAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATcc > 2:735679/1‑93 (MQ=255) | TGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑AAA‑AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCT > NC_000913/3099564‑3099745 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |