BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,237,242	+C	intergenic (+55/‑342)	ygjT → / → ygjU	putative transport protein/putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,237,240	1	.	C	100.0%	595.5 / NA	172	intergenic (+53/‑344)	ygjT/ygjU	putative transport protein/putative transport protein
Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (105/67); total (105/67)

Only 100 of 209 total aligned reads displayed.

CTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCT‑CCTCT‑C‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAA  >  NC_000913/3237148‑3237326

 tGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑tct‑c                                                                                         >  1:75572/1‑93 (MQ=255)

 tGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑tct‑c                                                                                         <  2:1191813/93‑1 (MQ=255)

 tGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑tct‑c                                                                                         >  2:1860512/1‑93 (MQ=255)

 tGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑tct‑c                                                                                         <  1:3553958/93‑1 (MQ=255)

  gggTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑tct‑cc                                                                                        >  2:3130860/1‑93 (MQ=255)

  gggTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑tct‑cc                                                                                        <  2:3659372/93‑1 (MQ=255)

   ggTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑tct‑ccc                                                                                       <  2:5723915/93‑2 (MQ=255)

    gTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑tct‑ccct                                                                                      >  2:631069/1‑91 (MQ=255)

    gTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑tct‑ccct                                                                                      >  1:2356431/1‑91 (MQ=255)

      gAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑tct‑ccctct                                                                                    >  2:4459396/1‑89 (MQ=255)

      gAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑tct‑ccctct                                                                                    >  2:5645188/1‑89 (MQ=255)

      gAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑tct‑ccctct                                                                                    >  1:3446167/1‑89 (MQ=255)

      gAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑tct‑ccctct                                                                                    >  1:1118688/1‑89 (MQ=255)

          tATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑Tctccctct‑c‑cct                                                                               <  2:4011508/93‑3 (MQ=255)

          tATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑Tctccctct‑c‑cct                                                                               <  1:5405591/93‑3 (MQ=255)

              ggCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCa                                                                            >  2:4524056/1‑93 (MQ=255)

              ggCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCa                                                                            >  1:5150579/1‑93 (MQ=255)

               gCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAg                                                                           >  1:2307209/1‑93 (MQ=255)

                 aTGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAggg                                                                         >  1:2076865/1‑93 (MQ=255)

                 aTGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAggg                                                                         >  1:459566/1‑93 (MQ=255)

                  tGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGga                                                                        >  1:2461365/1‑93 (MQ=255)

                  tGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGga                                                                        >  1:1668296/1‑93 (MQ=255)

                   gATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGgag                                                                       <  2:2154646/93‑1 (MQ=255)

                    aTAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGggga                                                                      <  2:103816/93‑1 (MQ=255)

                    aTAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGgaga                                                                      >  2:3269376/1‑93 (MQ=255)

                     tAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGagag                                                                     <  2:5790721/93‑1 (MQ=255)

                     tAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGagag                                                                     <  2:2182396/93‑1 (MQ=255)

                     tAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGagag                                                                     <  2:2120113/93‑1 (MQ=255)

                      aaGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAgg                                                                    <  1:1570246/93‑1 (MQ=255)

                      aaGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAgg                                                                    <  1:3937103/93‑1 (MQ=255)

                       agcagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAggg                                                                   <  1:1789566/93‑1 (MQ=255)

                       agcagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAggg                                                                   <  1:1849190/93‑1 (MQ=255)

                       agcagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAggg                                                                   <  1:2632343/93‑1 (MQ=255)

                       agcagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAggg                                                                   <  1:686699/93‑1 (MQ=255)

                        gcagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTTTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGt                                                                  >  1:5120507/1‑93 (MQ=255)

                        gcagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGCGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGt                                                                  <  2:506207/93‑1 (MQ=255)

                        gcagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGt                                                                  <  2:5978489/93‑1 (MQ=255)

                        gcagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGt                                                                  <  2:689501/93‑1 (MQ=255)

                             ggggTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCgggg                                                             <  1:5003291/93‑1 (MQ=255)

                              gggTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCggggg                                                            >  2:2952950/1‑92 (MQ=255)

                              gggTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGt                                                            <  2:1711936/93‑1 (MQ=255)

                              gggTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGt                                                            >  1:608304/1‑93 (MQ=255)

                              gggTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGt                                                            <  1:4173302/93‑1 (MQ=255)

                               ggTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTg                                                           <  2:3952391/93‑1 (MQ=255)

                                gTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGa                                                          >  2:2734592/1‑93 (MQ=255)

                                 tGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGTGGGTCGGGGTGAg                                                         >  2:5481479/1‑93 (MQ=255)

                                   gATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCCGGGAGAGGGTCGGGGTGAggg                                                       >  2:1541440/1‑93 (MQ=255)

                                   gATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCgggggggggg                                                       >  2:3351519/1‑93 (MQ=255)

                                   gATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAggg                                                       >  2:4260186/1‑93 (MQ=38)

                                   gATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAggg                                                       >  1:2963421/1‑93 (MQ=38)

                                    aTAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGt                                                      <  1:1022617/93‑1 (MQ=38)

                                      aaTTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTaa                                                    >  2:3614787/1‑93 (MQ=38)

                                       aTTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAAt                                                   >  1:1842054/1‑93 (MQ=38)

                                        tttttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAAtt                                                  <  1:1468248/93‑1 (MQ=38)

                                        tttttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCT‑CTCTTCCAGCGAGAGGGTCGGGGTGAGGGTAAtt                                                  >  1:5538957/1‑93 (MQ=255)

                                         ttttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAAttt                                                 >  1:3716013/1‑93 (MQ=38)

                                         ttttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAAttt                                                 >  2:125653/1‑93 (MQ=38)

                                           ttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAAttttt                                               >  2:6137573/1‑93 (MQ=38)

                                            tAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTc                                              >  2:732392/1‑93 (MQ=38)

                                             aaTCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCg                                             >  1:5045637/1‑93 (MQ=38)

                                               ccTGCCTAAGCCGTGTCCCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCa                                           <  2:560154/92‑1 (MQ=37)

                                                cTGCCTAAGCCGTGTCCCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCAc                                          <  1:615956/93‑1 (MQ=37)

                                                 tGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCAcc                                         <  1:3124927/93‑1 (MQ=38)

                                                 tGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCAcc                                         <  1:3710981/93‑1 (MQ=38)

                                                 tGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCAcc                                         <  2:3886979/93‑1 (MQ=38)

                                                 tGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCAcc                                         >  2:3413157/1‑93 (MQ=38)

                                                 tGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCAcc                                         >  1:5269223/1‑93 (MQ=38)

                                                  gCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCg                                        >  1:135636/1‑93 (MQ=37)

                                                   ccTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTCCCC‑CCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGa                                       <  1:295214/93‑1 (MQ=25)

                                                    cTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGAt                                      >  1:4238987/1‑93 (MQ=37)

                                                    cTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGAt                                      >  1:5973910/1‑93 (MQ=38)

                                                    cTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGAt                                      >  2:3052466/1‑93 (MQ=38)

                                                     tAAGCCGTGTACCCTGTCATTAACATGAGCCCCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATg                                     <  2:1245158/93‑1 (MQ=37)

                                                     tAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATg                                     >  1:4852204/1‑93 (MQ=38)

                                                     tAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATg                                     >  1:3444010/1‑93 (MQ=38)

                                                     tAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGCGAGAGGGTCGGGGGGAGGGAAATTTTTTGCACTGATg                                     >  1:593330/1‑93 (MQ=255)

                                                      aaGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGc                                    <  1:5901854/93‑1 (MQ=37)

                                                      aaGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGCGAGGGTAATTTTTCGCACCGATGc                                    >  1:2144595/1‑93 (MQ=38)

                                                        gCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTg                                  >  2:2413958/1‑93 (MQ=37)

                                                        gCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTg                                  <  2:1940782/93‑1 (MQ=38)

                                                        gCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTg                                  >  2:4764618/1‑93 (MQ=37)

                                                          cGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGc                                <  1:1089733/93‑1 (MQ=38)

                                                          cGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGc                                >  2:1060342/1‑93 (MQ=37)

                                                           gtgtACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGcc                               >  1:4636292/1‑93 (MQ=37)

                                                            tgtACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCt                              <  1:3272424/93‑1 (MQ=38)

                                                             ttACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTg                             >  2:2247/2‑93 (MQ=37)

                                                              tACCCTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGt                            >  1:2442381/1‑93 (MQ=37)

                                                                cccTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTc                          >  1:5730389/1‑93 (MQ=37)

                                                                  cTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGCTGCTGGCCTGTTccc                        >  2:2325426/1‑93 (MQ=25)

                                                                  cTGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTccc                        <  2:3801850/93‑1 (MQ=37)

                                                                   tGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTcccc                       <  2:131412/93‑1 (MQ=37)

                                                                   tGTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTcccc                       >  2:4195101/1‑93 (MQ=37)

                                                                    gTCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCt                      >  1:1826695/1‑93 (MQ=25)

                                                                     tCATTAACATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTc                     >  1:5187619/1‑93 (MQ=25)

                                                                           aCATGAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCAcccca               >  1:1010538/1‑91 (MQ=21)

                                                                               gAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAAccc           <  1:5951145/93‑1 (MQ=21)

                                                                               gAGCACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAAccc           <  1:5616783/93‑1 (MQ=21)

                                                                                  cACCGTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCctct        <  1:4948379/93‑1 (MQ=18)

                                                                                      gTTT‑TCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTcccc    <  2:4478561/93‑1 (MQ=18)

                                                                                       ttt‑tCTCCCTCTCC‑CTTCCAGGGGGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTCATCCTCTCCCCa   >  2:6050457/1‑93 (MQ=17)

CTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTT‑TCT‑CCTCT‑C‑CTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAA  >  NC_000913/3237148‑3237326

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`