Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,430,453 +C coding (745/747 nt) smf ← putative Rossmann‑fold nucleotide‑binding protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,430,4531.C98.0% 716.8 / 4.3 203coding (745/747 nt)smfputative Rossmann‑fold nucleotide‑binding protein
Reads supporting (aligned to +/- strand):  ref base . (3/1);  new base C (111/88);  total (114/89)
Fisher's exact test for biased strand distribution p-value = 6.33e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 224 total aligned reads displayed.

GAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑G‑AAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTT  >  NC_000913/3430361‑3430539
                                                                                               |                                                                                      
 aaTTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑g‑gc                                                                                        <  1:4843423/93‑2 (MQ=255)
 aaTTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑g‑gc                                                                                        <  2:3693371/93‑2 (MQ=255)
   tttCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTggcaa‑g‑g‑caa                                                                                     <  2:3860201/93‑1 (MQ=255)
    ttcttcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑G‑caaa                                                                                    <  2:1890548/93‑1 (MQ=255)
     tcttcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑G‑caaaa                                                                                   >  1:2902154/1‑93 (MQ=255)
      cttcCGATTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑G‑caaaaa                                                                                  >  1:6050740/1‑92 (MQ=255)
       ttcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑G‑caaaaac                                                                                 >  2:2041101/1‑91 (MQ=255)
        tcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACt                                                                                 <  1:42743/93‑1 (MQ=255)
        tcCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACt                                                                                 <  2:1201054/93‑1 (MQ=255)
         ccGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACtt                                                                                <  2:1498088/93‑1 (MQ=255)
           ggTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTtct                                                                              >  2:2524467/1‑93 (MQ=255)
            gTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTtctc                                                                             <  2:1763698/93‑1 (MQ=255)
            gTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTtctc                                                                             >  2:1398358/1‑93 (MQ=255)
             ttCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCg                                                                            <  1:4692695/93‑1 (MQ=255)
                cGTCACAAGATTCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAATG‑T‑AAAAACTTCTCGccc                                                                         >  2:5492477/1‑93 (MQ=255)
                cGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGccc                                                                         >  2:4096816/1‑93 (MQ=255)
                 gTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGcccc                                                                        >  2:2642465/1‑93 (MQ=255)
                 gTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGcccc                                                                        >  2:4773732/1‑93 (MQ=255)
                  tCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCt                                                                       >  1:1171192/1‑93 (MQ=255)
                  tCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCt                                                                       <  1:2488146/93‑1 (MQ=255)
                    acaAGAATCGCACCTTGTTTTATTAACCAGTGCGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑GAC‑AAAAACTTCTCGCCCCTGc                                                                     >  2:5164254/1‑93 (MQ=255)
                    acaAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAACAACTTCTCGCCCCTGc                                                                     >  2:3065064/1‑93 (MQ=255)
                    acaAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGc                                                                     <  2:1908444/93‑1 (MQ=255)
                    acaAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGc                                                                     <  2:5500517/93‑1 (MQ=255)
                     caAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCt                                                                    >  2:1282211/1‑93 (MQ=255)
                      aaGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTc                                                                   <  1:2192988/93‑1 (MQ=255)
                      aaGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTc                                                                   >  2:5329604/1‑93 (MQ=255)
                        gAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCaa                                                                 <  1:4515562/93‑1 (MQ=255)
                          aTCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAgc                                                               >  1:3640021/1‑93 (MQ=255)
                          aTCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAgc                                                               >  1:2982457/1‑93 (MQ=255)
                           tCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAgcg                                                              <  1:5746027/93‑1 (MQ=255)
                             gCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGca                                                            >  1:5911651/1‑93 (MQ=255)
                              cACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGcac                                                           <  1:2404792/93‑1 (MQ=255)
                              cACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTAGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGcac                                                           >  1:3725912/1‑93 (MQ=255)
                                 cTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTGTTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAAc                                                        >  1:3451248/1‑93 (MQ=255)
                                 cTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAAc                                                        <  2:5389824/93‑1 (MQ=255)
                                 cTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAAc                                                        <  2:5195422/93‑1 (MQ=255)
                                  ttGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACg                                                       >  2:2964191/1‑93 (MQ=255)
                                  ttGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACg                                                       >  2:5608786/1‑93 (MQ=255)
                                  cttttttATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACg                                                       <  1:698915/90‑1 (MQ=255)
                                      tttATTAACCAGTGAGGACCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCt                                                   >  1:1008038/1‑93 (MQ=255)
                                       ttattaACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTg                                                  >  2:3759715/1‑93 (MQ=255)
                                       ttattaACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTg                                                  >  2:4508447/1‑93 (MQ=255)
                                         attaACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTc                                                >  2:736420/1‑93 (MQ=255)
                                          ttaACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCa                                               <  1:3523696/93‑1 (MQ=255)
                                           taACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAACCTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCAc                                              <  2:3901897/93‑1 (MQ=255)
                                            aaCCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCAcc                                             >  1:4969827/1‑93 (MQ=255)
                                            aaCCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCAcc                                             >  1:3823585/1‑93 (MQ=255)
                                             aCCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCa                                            <  2:1423680/93‑1 (MQ=255)
                                             aCCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCa                                            >  2:5776469/1‑93 (MQ=255)
                                             aCCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCa                                            <  1:871164/93‑1 (MQ=255)
                                              ccAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAg                                           <  1:2694540/93‑1 (MQ=255)
                                               cAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGc                                          <  1:1416215/93‑1 (MQ=255)
                                                  tGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGaa                                       >  2:3420727/1‑93 (MQ=255)
                                                     ggCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCa                                    >  2:2981893/1‑93 (MQ=255)
                                                      gCCCATCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCAc                                   <  1:2134704/93‑1 (MQ=255)
                                                        ccTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTTCTTTCACCAGCGAACCACTa                                 <  2:2339459/93‑1 (MQ=255)
                                                        ccTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTa                                 <  2:1170139/93‑1 (MQ=255)
                                                        ccTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTa                                 <  2:5041813/93‑1 (MQ=255)
                                                         cTTCGCTTCCCGGATTCCCTATTGGACCTGGCAC‑G‑GCAAAAACTTCTCGCACCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTag                                >  2:4288816/1‑92 (MQ=255)
                                                         cTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTTCTGTCACCAGCGAACCACTAc                                <  1:3131996/93‑1 (MQ=255)
                                                         cTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAc                                >  2:5895195/1‑93 (MQ=255)
                                                         cTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAc                                >  1:2987014/1‑93 (MQ=255)
                                                         cTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAc                                <  1:5291661/93‑1 (MQ=255)
                                                         cTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTAc                                >  2:4551783/1‑93 (MQ=255)
                                                         cTTCGCTTCCCGGATTCCATATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCACACAACGTGCTGGCACCATCGAACctctta                                >  1:6011546/1‑91 (MQ=255)
                                                              cTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAACCTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCaaa                           <  1:2531543/93‑1 (MQ=255)
                                                              cTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCaaa                           <  2:7789/93‑1 (MQ=255)
                                                              cTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCaaa                           >  1:396477/1‑93 (MQ=255)
                                                              cTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCaaa                           <  1:4046705/93‑1 (MQ=255)
                                                              cTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCaaa                           >  1:84994/1‑93 (MQ=255)
                                                               ttCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAg                          >  1:4108045/1‑93 (MQ=255)
                                                               ttCCCGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAg                          >  1:5730085/1‑93 (MQ=255)
                                                                 cccGGATTCCCTATTGGACCTGGCAA‑GTC‑AAAATCTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGcc                        <  1:6106033/93‑1 (MQ=255)
                                                                 cccGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGcc                        <  2:1067538/93‑1 (MQ=255)
                                                                 cccGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGcc                        >  2:4380703/1‑93 (MQ=255)
                                                                  ccGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCg                       <  2:3260117/93‑1 (MQ=255)
                                                                   cGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGc                      >  2:4051434/1‑93 (MQ=255)
                                                                   cGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGc                      >  2:3144637/1‑93 (MQ=255)
                                                                   cGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGc                      >  1:557153/1‑93 (MQ=255)
                                                                   cGGATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGc                      >  1:815149/1‑93 (MQ=255)
                                                                     gagtCCCTATTGGACCGGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCtt                    >  1:5485349/4‑93 (MQ=255)
                                                                     gATTCCCTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCtc                    >  2:4978395/1‑92 (MQ=255)
                                                                          ccTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccacc               >  1:1801206/1‑93 (MQ=255)
                                                                           cTATTGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccacca              >  1:2678245/1‑93 (MQ=255)
                                                                              ttGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccaccacca           <  2:3647747/93‑1 (MQ=255)
                                                                              ttGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccaccacca           >  2:2932949/1‑93 (MQ=255)
                                                                              ttGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTccaccacca           >  2:4862949/1‑93 (MQ=255)
                                                                               tGGACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAg          <  2:1612906/93‑1 (MQ=255)
                                                                                ggACCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGt         <  2:3587227/93‑1 (MQ=255)
                                                                                  aCCTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTac       <  2:3361398/93‑1 (MQ=255)
                                                                                   ccTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTaca      >  2:5516146/1‑93 (MQ=255)
                                                                                   ccTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTaca      >  1:4922648/1‑93 (MQ=255)
                                                                                   ccTGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTaca      <  1:4255753/93‑1 (MQ=255)
                                                                                     tGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACAcc    >  2:4199723/1‑93 (MQ=255)
                                                                                     tGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACAcc    >  2:1457630/1‑93 (MQ=255)
                                                                                     tGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACAcc    >  2:2285532/1‑93 (MQ=255)
                                                                                     tGGCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACAACTACGCAAAGCCGCTTCCACCACCAGTACAcc    >  1:1667158/1‑93 (MQ=255)
                                                                                      ggcaa‑g‑gcaaAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCt   <  1:5707844/93‑1 (MQ=255)
                                                                                       gCAA‑G‑GCAAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTTCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCtt  <  1:2048869/93‑1 (MQ=255)
                                                                                               |                                                                                      
GAATTTCTTCCGGTTCCGTCACAAGAATCGCACCTTGTTTTATTAACCAGTGAGGCCCTTCGCTTCCCGGATTCCCTATTGGACCTGGCAA‑G‑G‑AAAAACTTCTCGCCCCTGCTCAAGCGCACAACGTGCTGTCACCAGCGAACCACTACGCAAAGCCGCTTCCACCACCAGTACACCTT  >  NC_000913/3430361‑3430539

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑