| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,872,450 | +G | coding (338/387 nt) | yidW ← | regulator protein for dgo operon |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,872,450 | 1 | . | G | 99.6% | 935.5 / ‑4.2 | 259 | coding (338/387 nt) | yidW | regulator protein for dgo operon |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base G (143/115); total (143/116) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.48e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 287 total aligned reads displayed.
TCGTTAAACGCTTCGCGGTCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑T‑CCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACC > NC_000913/3872358‑3872536 | tCGTTAAACGCTTCGCGGTCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑t < 2:2692331/93‑1 (MQ=255) cGTTAAACGCTTCGCGGTCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑tg > 1:3018303/1‑92 (MQ=255) cGTTAAACGCTTCGCGGTCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑tg > 2:1687170/1‑92 (MQ=255) gTTAAACGCTTCGCGGTCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑tgc > 2:2891607/1‑91 (MQ=255) ttAAACGCTTCGCGGTCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑T‑gcc > 2:5773987/1‑93 (MQ=255) tAAACGCTTCGCGGTCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑T‑gccc < 2:3701462/93‑2 (MQ=255) aaaCGCTTCGCGGTCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑T‑gccca > 2:3184763/1‑91 (MQ=255) aaCGCTTCGCGGTCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCaa > 1:868405/1‑93 (MQ=255) aCGCTTCGCGGTCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCGGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAAc > 2:1200302/1‑93 (MQ=255) aCGCTTCGCGGTCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAAc < 1:542225/93‑1 (MQ=255) cGCTTCGCGGTCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACg > 2:3875899/1‑93 (MQ=255) cGCTTCGCGGTCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACg < 1:1340900/93‑1 (MQ=255) gCTTCGCGGTCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACgg < 2:6069150/93‑1 (MQ=255) cTTCGCGGTCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACggg > 2:1124135/1‑93 (MQ=255) ttCGCGGTCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGc > 2:1596236/1‑93 (MQ=255) cgcgGTCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCaa < 1:4898769/93‑1 (MQ=255) gcgGTCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAAt < 1:4379610/93‑1 (MQ=255) ggTCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCg > 2:115599/1‑93 (MQ=255) ggTCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCg > 1:1988196/1‑93 (MQ=255) gTCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGc > 2:2046297/1‑93 (MQ=255) cTGATTGTTGGCAATCATCTCGTTCATCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCgg < 1:127315/93‑1 (MQ=255) cTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCgg < 2:492975/93‑1 (MQ=255) cTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCgg < 1:4761563/93‑1 (MQ=255) cTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCgg > 1:2519082/1‑93 (MQ=255) cTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCgg > 2:3256285/1‑93 (MQ=255) tGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGt > 1:2847703/1‑93 (MQ=255) tGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGt > 2:2595539/1‑93 (MQ=255) tGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGt < 1:2645746/93‑1 (MQ=255) tGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGt > 1:3922075/1‑93 (MQ=255) gATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGCCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGtt < 2:142881/93‑1 (MQ=255) ttgttgGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTcc > 2:2374296/1‑93 (MQ=255) ttgttgGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTcc > 2:4555549/1‑93 (MQ=255) gttgGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTccac > 1:2744846/1‑93 (MQ=255) gttgGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTccac < 1:5899976/93‑1 (MQ=255) tgGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTccacca > 2:5403623/1‑93 (MQ=255) gCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGa > 1:4112355/1‑93 (MQ=255) gCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGa < 2:3290402/93‑1 (MQ=255) cAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGAt > 1:6121778/1‑93 (MQ=255) aaTCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGAtt > 1:644255/1‑93 (MQ=255) atcatcTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGCttt > 2:901523/1‑93 (MQ=255) atcatcTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGAttt > 1:3507872/1‑93 (MQ=255) catcTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGCTT‑CCCAACGGGCAATCGCCGGTTCCACCAGATTTCg < 1:3971423/93‑1 (MQ=255) tctcGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCa < 2:3773650/93‑1 (MQ=255) tctcGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGAAGTCGCa > 2:5466561/1‑93 (MQ=255) ctcGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCAc < 2:5954932/93‑1 (MQ=255) cGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACtt > 2:4320921/1‑93 (MQ=255) ttCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCg < 2:1986927/93‑1 (MQ=255) ttCAGCGCCGATTCAATCTGCGCAAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCCCCAGATTTCGCACTTCg < 1:2285149/93‑1 (MQ=255) cAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCt < 2:5191207/93‑1 (MQ=255) aGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTc < 1:5974901/93‑1 (MQ=255) gcgcCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCa < 1:2767576/93‑1 (MQ=255) gcCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATg < 2:4429249/93‑1 (MQ=255) gcCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATg > 2:3915174/1‑93 (MQ=255) gcCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATg < 1:4496293/93‑1 (MQ=255) gcCGATTCAATCTGCGCCAGAGCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATg < 2:1587600/93‑1 (MQ=255) ccGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATgg < 2:3226615/93‑1 (MQ=255) cGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGc < 1:21827/93‑1 (MQ=255) cGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGc > 1:4632315/1‑93 (MQ=255) gATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCa > 1:3536758/1‑93 (MQ=255) aTTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCAc > 2:688624/1‑93 (MQ=255) aTTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCAc > 2:180990/1‑93 (MQ=255) aTTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCAc > 1:3846583/1‑93 (MQ=255) ttCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACt < 1:5838119/93‑1 (MQ=255) aTCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCTGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATa < 1:5665827/93‑1 (MQ=255) tCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATaa > 2:4644339/1‑93 (MQ=255) tCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATaa < 1:3296490/93‑1 (MQ=255) cTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAg < 2:3492082/93‑1 (MQ=255) cTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAg > 1:515857/1‑93 (MQ=255) tGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGc < 2:4006134/93‑1 (MQ=255) tGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGc < 2:5232722/93‑1 (MQ=255) gcgcCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGcc < 1:5757006/93‑1 (MQ=255) gcCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGt > 2:2817691/1‑93 (MQ=255) gcCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGt > 1:3151290/1‑93 (MQ=255) gcCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGt < 2:4822994/93‑1 (MQ=255) gcCAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGt > 2:4380273/1‑93 (MQ=255) ccAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTg < 2:2483785/93‑1 (MQ=255) cAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAATGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTgg < 2:5029258/93‑1 (MQ=255) cAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTgg < 1:4296491/93‑1 (MQ=255) cAGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTgg < 2:3650636/93‑1 (MQ=255) aGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTggg > 2:1279844/1‑93 (MQ=255) aGATCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTggg < 1:2725250/93‑1 (MQ=255) aTCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTc > 1:2040326/1‑93 (MQ=255) aTCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTc > 1:1030087/1‑93 (MQ=255) tCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCg < 1:1143126/93‑1 (MQ=255) tCGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCg > 2:1074218/1‑93 (MQ=255) cGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGt < 2:1329445/93‑1 (MQ=255) cGCTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGt < 1:1481622/93‑1 (MQ=255) cTGGAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAg > 2:778098/1‑93 (MQ=255) ggAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTc > 2:1766116/1‑93 (MQ=255) ggAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTc > 2:6051238/1‑93 (MQ=255) gAAGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCa < 1:1763117/93‑1 (MQ=255) aGTCGCGCGCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCAtt < 1:5806235/93‑1 (MQ=255) cgcgcgCTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTc < 1:1679138/93‑1 (MQ=255) gcgcgcTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTcc > 2:4449066/1‑93 (MQ=255) cgcgcTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCa > 1:4206576/1‑93 (MQ=255) cgcgcTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCa < 2:5691234/93‑1 (MQ=255) cgcgcTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGGCGTAGTCATTTTCCa > 2:4967807/1‑93 (MQ=255) gcgcTCTGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCat < 1:2362611/93‑2 (MQ=255) ctctGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCAc > 2:2113311/1‑93 (MQ=255) tctGC‑TGCCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCAcc > 1:819684/1‑93 (MQ=255) | TCGTTAAACGCTTCGCGGTCCTGATTGTTGGCAATCATCTCGTTCAGCGCCGATTCAATCTGCGCCAGATCGCTGGAAGTCGCGCGCTCTGC‑T‑CCCAACGGGCAATCGCCGGTTCCACCAGATTTCGCACTTCGCTCATGGCACTGATAAGCCGTGGGTCGTAGTCATTTTCCAGCACC > NC_000913/3872358‑3872536 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |