BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,951,166	+C	coding (35/1818 nt)	ilvD →	dihydroxyacid dehydratase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,951,166	1	.	C	100.0%	447.4 / NA	125	G12A (GGG→GCG)	ilvD	dihydroxyacid dehydratase
Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (12/113); total (12/113)

Only 100 of 153 total aligned reads displayed.

GAGACAGACACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GG‑GC‑C‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCAC  >  NC_000913/3951074‑3951248

gagaCAGACACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGTTGTGGGCTgg‑‑gg                                                                                         >  2:153794/1‑93 (MQ=255)

 agacagacACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑ggc                                                                                        <  2:3630139/93‑2 (MQ=255)

  gacagacaCTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCGTGCGCTGT‑‑ggcg                                                                                       >  1:1095833/1‑91 (MQ=255)

    cagacaCTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCGTGGGCCGg‑‑gg‑gggg                                                                                    >  1:3252683/1‑90 (MQ=255)

            gggAGTAAATAAAGTATGCCAAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGa                                                                           <  1:2156996/93‑1 (MQ=255)

             ggAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCCCCGCTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGaa                                                                          <  2:1144348/93‑1 (MQ=255)

             ggAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGaa                                                                          <  1:6114394/93‑1 (MQ=255)

             ggAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGaa                                                                          <  2:464904/93‑1 (MQ=255)

             ggAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGaa                                                                          <  2:3311270/93‑1 (MQ=255)

             ggAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGaa                                                                          <  1:4681989/93‑1 (MQ=255)

              gAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAAt                                                                         <  2:5099247/93‑1 (MQ=255)

                 taaataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGAc                                                                      <  1:5920953/93‑1 (MQ=255)

                 taaataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGAc                                                                      <  1:4283975/93‑1 (MQ=255)

                 taaataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGAc                                                                      <  1:1211949/93‑1 (MQ=255)

                 taaataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGAc                                                                      <  2:5220403/93‑1 (MQ=255)

                  aaataaaGTATGCCTAAGTACCGTTCCGCCACNACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGAcc                                                                     <  1:3120422/93‑1 (MQ=255)

                    ataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGa                                                                   <  1:3285586/93‑1 (MQ=255)

                    ataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGa                                                                   <  2:1541/93‑1 (MQ=255)

                    ataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGa                                                                   <  2:1726/93‑1 (MQ=255)

                    ataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGa                                                                   <  1:1956490/93‑1 (MQ=255)

                     taaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCGTGGGCTGTG‑GG‑GCGC‑‑CACCCGAATGACCGAc                                                                  >  1:4051831/1‑93 (MQ=255)

                      aaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACg                                                                 <  1:3650868/93‑1 (MQ=255)

                       aaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCGCGTGCGCTGT‑‑GG‑GG‑CGGCACCGGAACGAGCGgcgc                                                                >  2:2863711/1‑93 (MQ=255)

                        aGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGTTGTGGGCTGTGGGG‑GG‑C‑‑CACCGGCATGACCgccgcc                                                               >  1:5958375/1‑93 (MQ=255)

                         gTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGTCGTGCGCTGTG‑GG‑GCGC‑‑CACCGGAATGAACGGCGCC‑g                                                             >  1:1138544/1‑93 (MQ=255)

                          tATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑Ga                                                            <  1:42586/93‑1 (MQ=255)

                            tGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GAtt                                                          <  2:5425106/93‑1 (MQ=255)

                             gCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GAttt                                                         <  2:502012/93‑1 (MQ=255)

                             gCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GAttt                                                         <  1:2066437/93‑1 (MQ=255)

                              ccTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTc                                                        <  2:4145421/93‑1 (MQ=255)

                              ccTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTc                                                        <  2:5980446/93‑1 (MQ=255)

                               cTAAGTACCGTTTCGCCACCCCCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCg                                                       <  1:2154395/93‑1 (MQ=255)

                               cTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCGTGCGCTGTG‑GG‑GCGC‑‑CACCCGGATGACCGACCCC‑GCttttg                                                       >  2:4561164/1‑91 (MQ=255)

                                   gTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTaa                                                   <  2:1008275/93‑1 (MQ=255)

                                   gTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTaa                                                   <  1:2067734/93‑1 (MQ=255)

                                     aCCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGc                                                 <  2:3305634/93‑1 (MQ=255)

                                     aCCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGc                                                 <  1:5476696/93‑1 (MQ=255)

                                     aCCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGTCGTGCGCCGT‑‑GGCGCGC‑‑CCCCCGAATGACAGACGCC‑CATTTTGGTAAGc                                                 >  2:6147065/1‑93 (MQ=255)

                                      ccGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCCTGCGCCGTG‑GG‑GCGC‑‑CCCCCGGATGAACGCCGCC‑CATTTCTGTAAGcc                                                >  2:4831558/1‑93 (MQ=255)

                                        gTTCCGCCACCGCCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGa                                              <  2:1240610/93‑1 (MQ=255)

                                        gTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGa                                              <  1:839091/93‑1 (MQ=255)

                                        gTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCGTGCGCTGT‑‑GG‑GG‑CGGCACCGGGATGGCCGGCGCC‑CGTTTTGGTGAGCCgg                                              >  1:4947552/1‑92 (MQ=255)

                                         ttCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCGCGTGGGGCGT‑‑GG‑GG‑CGGCCCCCGGATGAACCACGCCGGATTTCGGTATGCCgt                                              >  1:3476846/1‑92 (MQ=255)

                                          tCCGCCCCCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGAtt                                            <  1:2722415/93‑1 (MQ=255)

                                          tCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CATCGGAATGACCGACGCC‑GATTTCGGTAAGCCGAtt                                            <  2:1278082/93‑1 (MQ=255)

                                          tCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGAtt                                            <  1:5793504/93‑1 (MQ=255)

                                           ccGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTa                                           <  1:4858764/93‑1 (MQ=255)

                                                cccaccacTCATGGTCGTAATATGGCGGTTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATcgcg                                      <  2:2481962/92‑1 (MQ=255)

                                                accaccacTCATGGTCGTAATATGGCGGGGGGTCCTGCGCTGTG‑GG‑GCGC‑‑CACCGGAATGAGCGACGCC‑GATTTCGGTAAGCCGATTATtgcg                                      >  2:6068478/1‑93 (MQ=255)

                                                 ccaccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCgg                                     <  2:3209398/93‑1 (MQ=255)

                                                  caccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGt                                    <  1:2368727/93‑1 (MQ=255)

                                                  caccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGt                                    <  1:3924955/93‑1 (MQ=255)

                                                  caccacTCATGGTCGTAATATGGCGGGGGCTCGTGCGCTGT‑‑GGCGCGC‑‑CCCCCGCATGACCGCCCCC‑GCTTTTGGTAAGCCCATTATCGCggg                                    >  2:4385990/1‑92 (MQ=255)

                                                   accacTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGtt                                   <  2:5581437/93‑1 (MQ=255)

                                                     cacTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCTATTATCGCGGTtgt                                 <  1:3754400/93‑1 (MQ=255)

                                                       cTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGa                               <  1:1159808/93‑1 (MQ=255)

                                                        tCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGaa                              <  1:5571835/93‑1 (MQ=255)

                                                         cATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAAc                             <  2:3513989/93‑1 (MQ=255)

                                                         cATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAAc                             <  2:3249342/93‑1 (MQ=255)

                                                         cATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCAGTTGTGAAc                             <  1:4185407/93‑1 (MQ=255)

                                                         cATGGTCGTAATATGGCGGGGGCTCGTGGGCTGG‑‑GG‑GG‑CGGCACCGGCATGACCGAAGCC‑GACTTCGGTGAGACCATGATCGCGGTTGGGaag                             >  2:4088949/1‑92 (MQ=255)

                                                         cATGGTCGTAATATGGCGCGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAAc                             <  2:5564149/93‑1 (MQ=255)

                                                           tGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTc                           <  1:1965697/93‑1 (MQ=255)

                                                           tGGTCGTAATATGGCGGGAGCTCCGGGGCTGTG‑GG‑GCGC‑‑CACCGGGCTAAACGACGCC‑CGGTTCGGTCAGCCGGATATCCCGGTTGTGGACTc                           >  2:1001832/1‑93 (MQ=255)

                                                             gTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGt                         <  2:3161092/93‑1 (MQ=255)

                                                                gTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCa                      <  1:172564/93‑1 (MQ=255)

                                                                gTAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCa                      <  1:3157851/93‑1 (MQ=255)

                                                                 tAATATGGCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCAc                     <  2:4308169/93‑1 (MQ=255)

                                                                 tAATATGGCGGGGGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGAACGACCCC‑GGATTCGGTAAGCCGATTATCGCGGTTGTGGACTCGTTCAc                     >  2:4078889/1‑93 (MQ=255)

                                                                       ggCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAtt               <  1:3296976/93‑1 (MQ=255)

                                                                        gCGGGTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAttt              <  2:1693621/93‑1 (MQ=255)

                                                                         cGGGTGCTCGTGCGCTGT‑‑GGCGCTC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTg             <  1:2261522/93‑1 (MQ=255)

                                                                          gggTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGt            >  1:3036584/1‑93 (MQ=255)

                                                                           ggTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTa           >  1:516196/1‑93 (MQ=255)

                                                                           ggTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTa           >  1:73979/1‑93 (MQ=255)

                                                                           ggTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTa           <  2:3791842/93‑1 (MQ=255)

                                                                            gTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTAc          <  1:3834818/93‑1 (MQ=255)

                                                                            gTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTAc          <  2:5265434/93‑1 (MQ=255)

                                                                            gTGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTAc          <  1:4404368/93‑1 (MQ=255)

                                                                             tGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAATTCGTTCACTCAATTTGTAcc         >  2:4431465/1‑93 (MQ=255)

                                                                             tGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTAcc         <  2:3803671/93‑1 (MQ=255)

                                                                             tGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTAcc         <  2:1954243/93‑1 (MQ=255)

                                                                             tGCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTAcc         <  2:4756911/93‑1 (MQ=255)

                                                                             tGCTCGCGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTAcc         >  1:511179/1‑93 (MQ=255)

                                                                              gCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCg        <  2:1871765/93‑1 (MQ=255)

                                                                              gCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCg        >  1:2495224/1‑93 (MQ=255)

                                                                              gCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCg        <  2:1425255/93‑1 (MQ=255)

                                                                              gCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCg        >  2:3733885/1‑93 (MQ=255)

                                                                              gCTCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGCTCACCCCATTTGTACCg        >  2:2415150/1‑93 (MQ=255)

                                                                                tCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCggg      <  2:5212594/93‑1 (MQ=255)

                                                                                tCGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCggg      <  1:221849/93‑1 (MQ=255)

                                                                                 cGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGt     <  1:1686895/93‑1 (MQ=255)

                                                                                 cGTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGt     <  2:3421647/93‑1 (MQ=255)

                                                                                  gTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTc    <  2:2168791/93‑1 (MQ=255)

                                                                                  gTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTc    <  2:4546772/93‑1 (MQ=255)

                                                                                  gTGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTc    <  1:663776/93‑1 (MQ=255)

                                                                                   tGCGCTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCa   <  2:1340638/93‑1 (MQ=255)

                                                                                    gcgcTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCAc  <  2:2541814/93‑1 (MQ=255)

                                                                                    gcgcTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCAc  >  2:2877720/1‑93 (MQ=255)

                                                                                    gcgcTGT‑‑GGCGCGC‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCAc  <  1:5759446/93‑1 (MQ=255)

GAGACAGACACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGT‑‑GG‑GC‑C‑‑CACCGGAATGACCGACGCC‑GATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCAC  >  NC_000913/3951074‑3951248

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`