BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,951,168	+G	coding (37/1818 nt)	ilvD →	dihydroxyacid dehydratase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,951,168	1	.	G	100.0%	439.4 / NA	125	P13A (CCC→GCC)	ilvD	dihydroxyacid dehydratase
Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (12/113); total (12/113)

Only 100 of 146 total aligned reads displayed.

GGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GG‑‑‑GC‑C‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCAC  >  NC_000913/3951086‑3951248

gggAGTAAATAAAGTATGCCAAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGa                                                                             <  1:2156996/93‑1 (MQ=255)

 ggAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGaa                                                                            <  2:6127628/93‑1 (MQ=255)

 ggAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGaa                                                                            <  2:5526150/93‑1 (MQ=255)

 ggAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGaa                                                                            <  2:464904/93‑1 (MQ=255)

 ggAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGaa                                                                            <  2:3311270/93‑1 (MQ=255)

 ggAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGaa                                                                            <  1:950311/93‑1 (MQ=255)

 ggAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGaa                                                                            <  1:4681989/93‑1 (MQ=255)

  gAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAAt                                                                           <  1:1146079/93‑1 (MQ=255)

  gAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAAt                                                                           <  2:3171487/93‑1 (MQ=255)

     taaataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGAc                                                                        <  2:1197325/93‑1 (MQ=255)

     taaataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGAc                                                                        <  1:4283975/93‑1 (MQ=255)

        ataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGa                                                                     <  1:1956490/93‑1 (MQ=255)

        ataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGa                                                                     <  2:2445358/93‑1 (MQ=255)

        ataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGa                                                                     <  1:3285586/93‑1 (MQ=255)

        ataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGa                                                                     <  2:1541/93‑1 (MQ=255)

         taaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCGTGGGCT‑‑GTG‑GG‑‑‑GCGC‑‑CACCCGAATGACCGAc                                                                    >  1:4051831/1‑93 (MQ=255)

          aaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACg                                                                   <  1:3650868/93‑1 (MQ=255)

           aaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCGCGTGCGCT‑‑GT‑‑GG‑‑‑GG‑CGGCACCGGAACGAGCGgcg‑c                                                                 >  2:2863711/1‑93 (MQ=255)

            aGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGTTGTGGGCT‑‑GTGGGG‑‑‑GG‑C‑‑CACCGGCATGACCgccg‑cc                                                                >  1:5958375/1‑93 (MQ=255)

             gTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑g                                                              <  2:4726542/93‑1 (MQ=255)

             gTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGTCGTGCGCT‑‑GTG‑GG‑‑‑GCGC‑‑CACCGGAATGAACGGCG‑CC‑g                                                              >  1:1138544/1‑93 (MQ=255)

                 gCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GAttt                                                          <  2:502012/93‑1 (MQ=255)

                 gCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GAttt                                                          <  1:2066437/93‑1 (MQ=255)

                  ccTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTc                                                         <  2:5980446/93‑1 (MQ=255)

                  ccTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTc                                                         <  2:4145421/93‑1 (MQ=255)

                   cTAAGTACCGTTTCGCCACCCCCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCg                                                        <  1:2154395/93‑1 (MQ=255)

                    tAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCGTGCGCT‑‑GT‑‑GGCGCGC‑C‑‑CCCCGGAA‑GAACCACG‑CC‑GATTTCgg                                                       >  1:5796818/1‑93 (MQ=255)

                      aGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTa                                                     <  1:6005476/93‑1 (MQ=255)

                       gTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTaa                                                    <  2:1008275/93‑1 (MQ=255)

                       gTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTaa                                                    <  1:2067734/93‑1 (MQ=255)

                         aCCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGc                                                  <  2:3602506/93‑1 (MQ=255)

                         aCCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGc                                                  <  1:5476696/93‑1 (MQ=255)

                         aCCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGTCGTGCGCC‑‑GT‑‑GGC‑‑GCGC‑‑CCCCCGAATGACAGACG‑CC‑CATTTTGGTAAGc                                                  >  2:6147065/1‑93 (MQ=255)

                          ccGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCCTGCGCC‑‑GTG‑GG‑‑‑GCGC‑‑CCCCCGGATGAACGCCG‑CC‑CATTTCTGTAAGcc                                                 >  2:4831558/1‑93 (MQ=255)

                            gTTCCGCCACCGCCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGa                                               <  2:1240610/93‑1 (MQ=255)

                            gTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGa                                               <  1:839091/93‑1 (MQ=255)

                            gTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCGTGCGCT‑‑GT‑‑GG‑‑‑GG‑CGGCACCGGGATGGCCGGCG‑CC‑CGTTTTGGTGAGCCgg                                               >  1:4947552/1‑92 (MQ=255)

                             ttCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCGCGTGGGGC‑‑GT‑‑GG‑‑‑GG‑CGGCCCCCGGATGAACCACG‑CCGGATTTCGGTATGCCgt                                               >  1:3476846/1‑92 (MQ=255)

                              tCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CATCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGAtt                                             <  2:1278082/93‑1 (MQ=255)

                              tCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGAtt                                             <  1:5793504/93‑1 (MQ=255)

                               ccGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTa                                            <  1:4858764/93‑1 (MQ=255)

                               ccGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTa                                            <  1:4267928/93‑1 (MQ=255)

                                   caccaccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑cgc                                       <  1:1283175/93‑1 (MQ=255)

                                    cccaccacTCATGGTCGTAATATGGCGGTTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑cgcg                                      <  2:2481962/92‑1 (MQ=255)

                                    cccaccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑cgcg                                      <  2:489474/92‑1 (MQ=255)

                                    accaccacTCATGGTCGTAATATGGCGGGTGCTCGGGGGGTGGGG‑‑GG‑‑‑GG‑C‑‑CCCCCGGATGACCGCCC‑CC‑GATTTTGGTAAGGCGATTAT‑tgcg                                      >  2:1065667/1‑93 (MQ=255)

                                     ccaccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCgg                                     <  1:313959/93‑1 (MQ=255)

                                      caccacTCATGGTCGTAATATGGCGGGGGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CCCCCGCATGACCGCCC‑CC‑GCTTTTGGTAAGCCCATTAT‑CGCggg                                    >  2:4385990/1‑92 (MQ=255)

                                       accacTCATGGTCGTAATATGGCGGGGGGGCGTGGGCC‑‑GT‑‑GG‑‑‑GG‑CGGCGCCCGGATTAACCACG‑CC‑GATTTCGGTAGAACGAGTAT‑TGCgggg                                   >  2:5114896/1‑91 (MQ=255)

                                       accacTCATGGTCGTAATATGGCGGGGGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCCGAATGACCGACGCCC‑GATTT‑TGTAAGCCCATTTT‑CGCgggt                                   >  2:3344941/1‑91 (MQ=255)

                                         cacTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCTATTAT‑CGCGGTtgt                                 <  1:3754400/93‑1 (MQ=255)

                                         cacTCATGGTCGTAATATGGCGGGGGGTCGTGCGCG‑‑GTG‑GG‑‑‑GCGC‑‑CACCGGGATGACCGACG‑CC‑GATTTCGGTGAACCGATTATCCGCGGtgt                                  >  2:3285289/1‑91 (MQ=255)

                                           cTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGa                               <  2:5257545/93‑1 (MQ=255)

                                           cTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGa                               <  2:3772466/93‑1 (MQ=255)

                                           cTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGa                               <  1:1159808/93‑1 (MQ=255)

                                            tCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGaa                              <  1:5571835/93‑1 (MQ=255)

                                             cATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAAc                             <  2:3513989/93‑1 (MQ=255)

                                             cATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAAc                             <  2:3249342/93‑1 (MQ=255)

                                             cATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCAGTTGTGAAc                             <  1:4185407/93‑1 (MQ=255)

                                             cATGGTCGTAATATGGCGGGGGCTCGTGGGCT‑‑GG‑‑GG‑‑‑GG‑CGGCACCGGCATGACCGAAG‑CC‑GACTTCGGTGAGACCATGAT‑CGCGGTTGGGaag                             >  2:4088949/1‑92 (MQ=255)

                                             cATGGTCGTAATATGGCGCGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAAc                             <  2:5564149/93‑1 (MQ=255)

                                               tGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTc                           <  1:1965697/93‑1 (MQ=255)

                                                 gTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGt                         <  2:3161092/93‑1 (MQ=255)

                                                    gTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCa                      <  1:3157851/93‑1 (MQ=255)

                                                    gTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCa                      <  1:2301911/93‑1 (MQ=255)

                                                     tAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCAc                     <  2:4308169/93‑1 (MQ=255)

                                                     tAATATGGCGGGGGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGAACGACC‑CC‑GGATTCGGTAAGCCGATTAT‑CGCGGTTGTGGACTCGTTCAc                     >  2:4078889/1‑93 (MQ=255)

                                                           ggCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAAtt               <  1:3296976/93‑1 (MQ=255)

                                                           ggCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAAtt               <  1:5699889/93‑1 (MQ=255)

                                                            gCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAAttt              <  2:5586602/93‑1 (MQ=255)

                                                            gCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAAttt              <  2:181024/93‑1 (MQ=255)

                                                            gCGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAAttt              <  2:1693621/93‑1 (MQ=255)

                                                             cGGGTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCTC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTg             <  1:2261522/93‑1 (MQ=255)

                                                              gggTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGt            >  1:3036584/1‑93 (MQ=255)

                                                               ggTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGTa           >  1:516196/1‑93 (MQ=255)

                                                               ggTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGTa           <  2:3791842/93‑1 (MQ=255)

                                                                gTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGTAc          <  1:3834818/93‑1 (MQ=255)

                                                                gTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGTAc          <  2:5265434/93‑1 (MQ=255)

                                                                gTGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGTAc          <  2:4559238/93‑1 (MQ=255)

                                                                 tGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAATTCGTTCACTCAATTTGTAcc         >  2:4431465/1‑93 (MQ=255)

                                                                 tGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGTAcc         <  2:3803671/93‑1 (MQ=255)

                                                                 tGCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGTAcc         >  1:674409/1‑93 (MQ=255)

                                                                 tGCTCGCGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGTAcc         >  1:511179/1‑93 (MQ=255)

                                                                  gCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGTACCg        <  2:2144031/93‑1 (MQ=255)

                                                                  gCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGTACCg        <  2:1871765/93‑1 (MQ=255)

                                                                  gCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGTACCg        >  1:2495224/1‑93 (MQ=255)

                                                                  gCTCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGTACCg        <  2:1425255/93‑1 (MQ=255)

                                                                    tCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGTACCggg      <  1:221849/93‑1 (MQ=255)

                                                                    tCGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGTACCggg      <  2:5212594/93‑1 (MQ=255)

                                                                     cGTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGt     <  1:1686895/93‑1 (MQ=255)

                                                                      gTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTc    <  1:663776/93‑1 (MQ=255)

                                                                      gTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTc    >  1:2896452/1‑93 (MQ=255)

                                                                      gTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTc    <  2:4546772/93‑1 (MQ=255)

                                                                      gTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTc    <  1:4491985/93‑1 (MQ=255)

                                                                      gTGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTc    <  2:2168791/93‑1 (MQ=255)

                                                                       tGCGCT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCa   <  2:1340638/93‑1 (MQ=255)

                                                                       ggcgcT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCa   <  1:387540/92‑1 (MQ=255)

                                                                        gcgcT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCAc  <  2:2541814/93‑1 (MQ=255)

                                                                        gcgcT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCAc  >  2:2877720/1‑93 (MQ=255)

                                                                        gcgcT‑‑GT‑‑GGC‑‑GCGC‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCAc  <  1:2499996/93‑1 (MQ=255)

GGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCT‑‑GT‑‑GG‑‑‑GC‑C‑‑CACCGGAATGACCGACG‑CC‑GATTTCGGTAAGCCGATTAT‑CGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCAC  >  NC_000913/3951086‑3951248

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`