| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,957,092 | +CC | intergenic (+26/+58) | ilvC → / ← ppiC | ketol‑acid reductoisomerase/peptidyl‑prolyl cis‑trans isomerase C |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,957,091 | 1 | . | C | 95.0% | 315.4 / 13.0 | 121 | intergenic (+25/+59) | ilvC/ppiC | ketol‑acid reductoisomerase/peptidyl‑prolyl cis‑trans isomerase C |
| Reads supporting (aligned to +/- strand): ref base . (0/6); new base C (9/106); total (9/112) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.48e-01 | |||||||||||
| * | NC_000913 | 3,957,091 | 2 | . | C | 95.0% | 313.6 / 13.0 | 121 | intergenic (+25/+59) | ilvC/ppiC | ketol‑acid reductoisomerase/peptidyl‑prolyl cis‑trans isomerase C |
| Reads supporting (aligned to +/- strand): ref base . (0/6); new base C (9/106); total (9/112) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.37e-01 | |||||||||||
Only 100 of 131 total aligned reads displayed.
GAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGA‑‑CTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAA‑GC‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAAT > NC_000913/3957001‑3957173 || gAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGA‑‑cc < 2:24706/93‑2 (MQ=255) aggtaggtAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGA‑‑Ccctct < 1:2235990/93‑2 (MQ=255) ggtaggtaAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGA‑‑Ccctctc < 1:2051478/93‑3 (MQ=255) gtaggtaAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGA‑‑Ccctctcc < 2:83347/93‑4 (MQ=255) gtaggtaAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGA‑‑Ccctctcc < 1:5512205/93‑4 (MQ=255) taggtaAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGGCCTCACCCCCA‑‑CCCTccccc > 2:5306005/1‑91 (MQ=255) gtaAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCcaca < 1:1490220/93‑1 (MQ=38) taAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACag < 1:3943828/93‑1 (MQ=37) aaGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACagg < 1:5874305/93‑1 (MQ=37) aaGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACagg < 1:1506081/93‑1 (MQ=37) aaGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACagg < 1:5127257/93‑1 (MQ=37) aaGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACagg < 1:442242/93‑1 (MQ=37) gAAGCTGCGAGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACaggga < 1:614449/93‑1 (MQ=25) gAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACaggga < 2:1391639/93‑1 (MQ=37) aaaCTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACagggag < 2:308817/93‑1 (MQ=37) aaCTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACagggaga < 2:308317/93‑1 (MQ=37) aaCTGCGCGGCTATATGACAGAGATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACagggaga < 2:1602838/93‑1 (MQ=25) tGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGGCCCTACCCCGAGCCTCTCCCACacggcgaggg > 1:1180540/1‑93 (MQ=255) gcgGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAgggagagggaga < 2:5863167/93‑1 (MQ=25) gcgGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAgggagagggaga < 1:1462075/93‑1 (MQ=25) cgGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCCCCCCCACCCTCTCCCCCcgggagagggagga > 2:5349304/1‑91 (MQ=25) cgGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGaa < 1:5147220/93‑1 (MQ=25) ggCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCGCTCCCACAGGGAGAGGGAGaaa < 1:2054224/93‑1 (MQ=25) cTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAac < 1:3113233/93‑1 (MQ=21) cTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAac < 2:3949230/93‑1 (MQ=21) cTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACACGGGGGGGGGGaaaaa > 1:6123685/1‑92 (MQ=21) tatGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCGCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑t > 1:4305824/1‑93 (MQ=21) atGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑Tc < 2:1701736/93‑1 (MQ=21) tGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCa < 1:5177571/93‑1 (MQ=21) tGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCa < 2:1476689/93‑1 (MQ=21) tGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCa < 1:5765629/93‑1 (MQ=21) tGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCa < 1:48730/93‑1 (MQ=21) tGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCa < 2:6072941/93‑1 (MQ=21) aCAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAA‑g < 1:5565873/93‑1 (MQ=21) aCAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAA‑g < 1:4575268/93‑1 (MQ=21) aGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAA‑ggc < 2:2422879/93‑3 (MQ=21) atGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGATAAAACAC‑TCAAGGC‑CTtc < 2:2436726/93‑1 (MQ=18) atGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTtc < 2:3465767/93‑1 (MQ=18) atGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTtc < 2:4706130/93‑1 (MQ=18) atGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTtc < 1:927910/93‑1 (MQ=18) gAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTtctc < 2:83547/93‑1 (MQ=18) gAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTtctc < 2:3726613/93‑1 (MQ=18) gAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTtctc < 2:1435796/93‑1 (MQ=18) gAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTtctc < 2:4978611/93‑1 (MQ=18) gAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTtctc < 1:5707864/93‑1 (MQ=18) aaaCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCCCCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGA‑CTTCTcc < 1:1415221/93‑1 (MQ=18) aaCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCt < 2:2489644/93‑1 (MQ=18) aaCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCt < 1:2148729/93‑1 (MQ=18) aCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTg < 2:2488997/93‑1 (MQ=18) aCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTg < 2:4609262/93‑1 (MQ=18) cGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCGCACAGGGAGAGGGAGAAAACAA‑TCAAGGC‑CTTCTCCTgg > 2:2718552/1‑93 (MQ=18) gTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGga < 2:2782371/93‑1 (MQ=18) gTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGga < 2:2265983/93‑1 (MQ=18) gTATTGCTGTTGCGGGGTAAGTGCGCGCTGATGCCCTCCCCCCCACCCTCTCCCCCAAGGCGAAGGGGGAAACAC‑CCAA‑ACGCTTCTccctga > 2:3382122/1‑89 (MQ=12) aTTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGgaga < 2:3572386/93‑1 (MQ=18) aTTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGgaga < 2:677933/93‑1 (MQ=18) ttGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGaa < 2:3302854/93‑1 (MQ=18) ttGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGaa < 1:4612686/93‑1 (MQ=18) tGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAg < 1:1635564/93‑1 (MQ=18) tGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAg < 1:4438388/93‑1 (MQ=18) tcTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAgg < 2:3497629/92‑1 (MQ=18) cTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCCCTCCCCCATGGAGGGGGGGGGAACACACCAA‑GC‑CGTCTCCCGGAGAAGGc > 1:5374225/1‑93 (MQ=12) tGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGcc < 1:4805151/93‑1 (MQ=18) tGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGcc < 1:4017842/93‑1 (MQ=18) gTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCt < 2:3425918/93‑1 (MQ=18) gTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCt < 1:4595024/93‑1 (MQ=18) ttGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCtt < 1:1001283/93‑1 (MQ=18) ttGAGGGTTAAGTGCGCGCTGATGCCCTCGCCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCtt < 1:3740307/93‑1 (MQ=18) gCGTGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGc < 2:6103709/93‑1 (MQ=18) gCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGc < 1:3264256/93‑1 (MQ=18) gCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGc < 2:1641988/93‑1 (MQ=18) ggTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGCTAt < 2:1441983/93‑1 (MQ=18) ggTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGCTAt < 2:5205762/93‑1 (MQ=18) ggTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGCTAt < 1:1657751/93‑1 (MQ=18) aaGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGCTATTAGt < 2:5340369/93‑1 (MQ=18) aaGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGCTATTAGt < 1:2676680/93‑1 (MQ=18) aaGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGCTATTAGt < 2:5975077/93‑1 (MQ=18) aGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGCTATTAGtt < 1:2776490/93‑1 (MQ=18) aGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGCTATTAGtt < 1:3664536/93‑1 (MQ=18) aGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGCTATTAGtt < 2:335793/93‑1 (MQ=18) gTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTg < 1:441583/93‑1 (MQ=18) tGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGc < 1:4714255/93‑1 (MQ=21) tGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGc < 2:1113653/93‑1 (MQ=21) tGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCCGGAGAAGGCCTTGCTATTAGTTGc < 1:1554658/93‑1 (MQ=18) gcgcgcTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCg < 2:797858/93‑1 (MQ=21) gcgcTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGt < 2:2590604/93‑1 (MQ=21) cgcTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTa < 2:3129113/93‑1 (MQ=21) gATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGc < 1:832/93‑1 (MQ=25) gCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCAcc < 1:1580149/93‑1 (MQ=25) cccTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCt < 2:4872583/93‑1 (MQ=25) ccTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCtt < 2:3915710/93‑1 (MQ=25) cTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTa < 1:2350572/93‑1 (MQ=37) cTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCCTGCTATTAGTTGCGGTACAGCACCTTa > 2:136447/1‑93 (MQ=25) tCACCCCGACCCTCTCCCCCAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGGGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTaa > 2:1243656/1‑93 (MQ=25) tCACCCCGACCCTCTCCCACAGGGAGCGGGAGGAAACAC‑TCAAGGC‑CTTCTCCTTGCGCAGGCCTTGCTATTAGTTGTGGTACCGGGCCTTaa > 2:1513959/1‑93 (MQ=16) tCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTaa > 2:5846674/1‑93 (MQ=37) tCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTaa > 2:1102475/1‑93 (MQ=37) tCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTaa > 2:1563701/1‑93 (MQ=37) ccACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTaa < 2:4925545/92‑1 (MQ=37) cACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAAGGC‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAat < 2:4189783/93‑1 (MQ=37) || GAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGA‑‑CTCTCCCACAGGGAGAGGGAGAAAACAC‑TCAA‑GC‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAAT > NC_000913/3957001‑3957173 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |