BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,957,124	+G	intergenic (+58/+26)	ilvC → / ← ppiC	ketol‑acid reductoisomerase/peptidyl‑prolyl cis‑trans isomerase C

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,957,123	1	.	G	100.0%	487.4 / NA	156	intergenic (+57/+27)	ilvC/ppiC	ketol‑acid reductoisomerase/peptidyl‑prolyl cis‑trans isomerase C
Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (49/107); total (49/107)

Only 100 of 171 total aligned reads displayed.

GACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGA‑‑CTCTCCCACAGGGAGAGGGAGAAAACACTCAA‑G‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTC  >  NC_000913/3957033‑3957210

 aCAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAA‑g                                                                                          <  1:4575268/93‑1 (MQ=21)

 aCAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAA‑g                                                                                          <  1:5565873/93‑1 (MQ=21)

  cAGATATGAAACGTATTGCTGTTGCGGGTGAAGTGCGCGCTGATGCCCTCACCCCGACCCGCTCCCACAGGGAGAGGGAGAAAACACTCAA‑gg                                                                                         <  1:2987998/93‑2 (MQ=18)

     atatGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAA‑ggcct                                                                                      <  2:1093455/93‑5 (MQ=21)

       atGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGATAAAACACTCAAGG‑C‑CTtc                                                                                   <  2:2436726/93‑1 (MQ=18)

       atGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTtc                                                                                   <  2:3465767/93‑1 (MQ=18)

       atGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTtc                                                                                   <  1:927910/93‑1 (MQ=18)

       atGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTtc                                                                                   <  1:3698608/93‑1 (MQ=18)

         gAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTtctc                                                                                 <  2:1435796/93‑1 (MQ=18)

         gAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTtctc                                                                                 <  1:5707864/93‑1 (MQ=18)

         gAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTtctc                                                                                 <  2:83547/93‑1 (MQ=18)

         gAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTtctc                                                                                 <  2:3726613/93‑1 (MQ=18)

           aaCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCt                                                                               <  1:2148729/93‑1 (MQ=18)

           aaCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCt                                                                               <  2:5607142/93‑1 (MQ=18)

           aaCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCt                                                                               <  2:2489644/93‑1 (MQ=18)

            aCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTg                                                                              <  2:2488997/93‑1 (MQ=18)

             cGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCGCACAGGGAGAGGGAGAAAACAATCAAGG‑C‑CTTCTCCTgg                                                                             >  2:2718552/1‑93 (MQ=18)

              gTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGga                                                                            <  2:2265983/93‑1 (MQ=18)

              gTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGga                                                                            <  2:2782371/93‑1 (MQ=18)

              gTATTGCTGTTGCGGGGTAAGTGCGCGCTGATGCCCTCCCCCCCACCCTCTCCCCCAAGGCGAAGGGGGAAACACCCAA‑A‑CGCTTCTccctga                                                                            >  2:3382122/1‑89 (MQ=12)

                aTTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGgaga                                                                          <  2:677933/93‑1 (MQ=18)

                aTTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGgaga                                                                          <  2:3572386/93‑1 (MQ=18)

                 ttGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGaa                                                                         <  1:4612686/93‑1 (MQ=18)

                  tGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAg                                                                        <  1:4438388/93‑1 (MQ=18)

                     tGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGcc                                                                     <  1:4805151/93‑1 (MQ=18)

                       ttGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCtt                                                                   <  1:1001283/93‑1 (MQ=18)

                       ttGAGGGTTAAGTGCGCGCTGATGCCCTCGCCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCtt                                                                   <  1:3740307/93‑1 (MQ=18)

                         gCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGc                                                                 <  1:3264256/93‑1 (MQ=18)

                         gCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGc                                                                 <  2:2828094/93‑1 (MQ=18)

                            ggTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTAt                                                              <  2:1441983/93‑1 (MQ=18)

                            ggTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTAt                                                              <  1:1657751/93‑1 (MQ=18)

                              ttAAGTGCGCGCTGATGCCCTCACCCCCACCCTCTCCCCCAGGGAGGGGGGGAAAACACTCAAGG‑A‑CTTCTCCTGGAGAAGGCCTTGCTAttt                                                            >  1:6054233/1‑92 (MQ=18)

                                aaGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGt                                                          <  2:5975077/93‑1 (MQ=18)

                                aaGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGt                                                          <  2:6048778/93‑1 (MQ=18)

                                aaGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGt                                                          <  1:2676680/93‑1 (MQ=18)

                                  gTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTg                                                        <  1:441583/93‑1 (MQ=18)

                                   tGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGc                                                       <  2:1113653/93‑1 (MQ=21)

                                   tGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGc                                                       <  1:4714255/93‑1 (MQ=21)

                                   tGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCCGGAGAAGGCCTTGCTATTAGTTGc                                                       <  1:1554658/93‑1 (MQ=18)

                                    gcgcgcTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCg                                                      <  2:3229581/93‑1 (MQ=21)

                                      gcgcTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGt                                                    <  2:2590604/93‑1 (MQ=21)

                                              gCCCTCCCCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCAcc                                            <  2:5271009/93‑1 (MQ=25)

                                              gCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCAcc                                            <  1:2149660/93‑1 (MQ=25)

                                              gCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCAcc                                            <  1:1580149/93‑1 (MQ=25)

                                               cccTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCt                                           <  2:4872583/93‑1 (MQ=25)

                                                ccTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCtt                                          <  2:3915710/93‑1 (MQ=25)

                                                 cTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTa                                         <  1:2350572/93‑1 (MQ=37)

                                                 cTCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCCTGCTATTAGTTGCGGTACAGCACCTTa                                         >  2:136447/1‑93 (MQ=25)

                                                  tCACCCCGACCCTCTCCCCCAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGGGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTaa                                        >  2:1243656/1‑93 (MQ=25)

                                                  tCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTaa                                        >  2:1563701/1‑93 (MQ=37)

                                                  tCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTaa                                        >  2:1102475/1‑93 (MQ=37)

                                                  ccACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTaa                                        <  2:4925545/92‑1 (MQ=37)

                                                   cACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAat                                       <  2:4189783/93‑1 (MQ=37)

                                                         gaccctctCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGAtgtg                                 >  1:593498/5‑93 (MQ=38)

                                                         gaccctctCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGAtgtg                                 <  2:3038699/89‑1 (MQ=38)

                                                          accctctCCCACAGGGAGAGAGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGa                                <  2:3168076/90‑1 (MQ=39)

                                                           ccctctCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGat                               <  1:3191977/91‑1 (MQ=255)

                                                           ccctctCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGat                               <  2:5461787/91‑1 (MQ=255)

                                                            cctctCCCACAGGGAGAGGGAGATAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGata                              >  1:429083/2‑93 (MQ=39)

                                                            cctctCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGTGGTACAGCACCTTAATGATGTGata                              >  1:4129723/2‑93 (MQ=39)

                                                            cctctCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGata                              >  1:2831542/2‑93 (MQ=255)

                                                             ctctCCCACAGGGAGAGGGGGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGatat                             <  2:4643710/93‑1 (MQ=255)

                                                             ctctCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGatat                             >  1:2026256/1‑93 (MQ=255)

                                                             ctctCCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGatat                             >  2:375375/1‑93 (MQ=255)

                                                              tctcCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATc                            >  2:1712911/1‑93 (MQ=255)

                                                               ctcCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATcc                           <  1:4275880/93‑1 (MQ=255)

                                                               ctcCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATcc                           <  1:3032338/93‑1 (MQ=255)

                                                                tcCCACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTGGCGGGACAGCACCTTAATGATGTGATATCCg                          >  2:5251654/1‑93 (MQ=255)

                                                                 cccACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGa                         <  2:4876278/93‑1 (MQ=255)

                                                                 cccACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGa                         >  2:2151705/1‑93 (MQ=255)

                                                                  ccACAGGGAGAGGGAGAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGaa                        >  2:3398552/1‑93 (MQ=255)

                                                                      agggagagggagAAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCTGAACtag                    >  2:4634271/1‑91 (MQ=255)

                                                                       gggagagggagaAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTggg                   >  1:635042/1‑93 (MQ=255)

                                                                       gggagagggagaAAACACTCAA‑GCC‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTggg                   <  1:1269613/93‑1 (MQ=255)

                                                                        ggagagggagaAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGgt                  <  2:934694/93‑1 (MQ=255)

                                                                        ggagagggagaAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGgt                  <  1:5659660/93‑1 (MQ=255)

                                                                          agagggagaAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGgtgt                <  2:4560038/93‑1 (MQ=255)

                                                                            agggagaAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCTGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGc              <  1:2408755/93‑1 (MQ=255)

                                                                            agggagaAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGc              <  2:4142579/93‑1 (MQ=255)

                                                                            agggagaAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGc              <  1:39626/93‑1 (MQ=255)

                                                                            agggagaAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGc              <  2:1559821/93‑1 (MQ=255)

                                                                            agggagaAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGc              <  2:5093887/93‑1 (MQ=255)

                                                                             gggagaAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCa             <  2:67956/93‑1 (MQ=255)

                                                                             gggagaAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCa             >  1:5469676/1‑93 (MQ=255)

                                                                             gggagaAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCa             <  1:5484295/93‑1 (MQ=255)

                                                                              ggagaAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAatgat                                    <  1:4449540/69‑1 (MQ=255)

                                                                              ggagaAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAatgat                                    >  2:4449540/1‑69 (MQ=255)

                                                                               gagaAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGc           <  1:2228775/93‑1 (MQ=255)

                                                                               gagaAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGc           >  1:3511572/1‑93 (MQ=255)

                                                                               gagaAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGc           <  1:3305956/93‑1 (MQ=255)

                                                                                 gaAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGACATGGGTGTGCAGCgg         >  1:1189619/1‑93 (MQ=255)

                                                                                 gaAAACACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCgg         <  2:5717940/93‑1 (MQ=255)

                                                                                   aaaCACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGc       >  2:5856670/1‑93 (MQ=255)

                                                                                    aaCACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGcc      >  1:6104262/1‑93 (MQ=255)

                                                                                    aaCACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGcc      <  2:4718741/93‑1 (MQ=255)

                                                                                    aaCACTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGcc      >  2:5647772/1‑93 (MQ=255)

                                                                                      cacTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCgg    >  2:5798578/1‑93 (MQ=255)

                                                                                       acTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGt   <  2:3351885/93‑1 (MQ=255)

                                                                                        cTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTc  <  1:5322317/93‑1 (MQ=255)

                                                                                        cTCAAGG‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTc  <  2:1832374/93‑1 (MQ=255)

GACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGA‑‑CTCTCCCACAGGGAGAGGGAGAAAACACTCAA‑G‑C‑CTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTC  >  NC_000913/3957033‑3957210

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`