| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,957,551 | +T | intergenic (‑120/‑741) | ppiC ← / → rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,957,550 | 1 | . | T | 98.5% | 498.5 / ‑0.3 | 138 | intergenic (‑119/‑742) | ppiC/rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Reads supporting (aligned to +/- strand): ref base . (2/0); new base T (60/75); total (63/75) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.74e-01 | |||||||||||
Only 100 of 139 total aligned reads displayed.
TAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑T‑G‑‑C‑TCGCAGGT‑C‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT > NC_000913/3957470‑3957627 | tAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGT‑c‑c < 1:4646966/93‑1 (MQ=255) cATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGT‑c‑cctc > 2:4558835/1‑90 (MQ=255) aTGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGT‑c‑cctca < 1:3594481/93‑5 (MQ=255) aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAgg < 1:826261/93‑1 (MQ=255) aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAgg < 1:151896/93‑1 (MQ=255) tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAggg > 2:4325677/1‑93 (MQ=255) tCCGCAGATGCTAACATAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAggg > 2:2895915/1‑93 (MQ=255) ccGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAgggg < 2:5923120/93‑1 (MQ=255) cGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGga < 2:3388717/93‑1 (MQ=255) aTGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGaaaa > 1:308986/1‑93 (MQ=255) tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAAc > 2:4544786/1‑93 (MQ=255) tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAAc > 1:2605310/1‑93 (MQ=255) gCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACt > 1:2938992/1‑93 (MQ=255) gCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CGTCGCAGGTCC‑CTCAAGGGGAGAAAACt > 2:1293094/1‑93 (MQ=255) aaCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAg < 1:1018440/93‑1 (MQ=255) aaCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAg > 1:1900277/1‑93 (MQ=255) aaCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAg < 2:1925912/93‑1 (MQ=255) aCGTAATTGTCAGTCAGGGAGTCGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAgg < 1:3201179/93‑1 (MQ=255) gTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGc > 1:3249213/1‑93 (MQ=255) gTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGc < 2:1798259/93‑1 (MQ=255) gTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGT‑CTCTCAAGGGGAGAAAACTTAGGGc > 1:3443540/1‑93 (MQ=255) tAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGcc < 2:5958304/93‑1 (MQ=255) tAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGcc > 2:1670348/1‑93 (MQ=255) tAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGcc < 1:1056185/93‑1 (MQ=255) aaTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCct < 2:6071234/93‑1 (MQ=255) aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCctc < 2:4959993/93‑1 (MQ=255) aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCctc < 2:1815027/93‑1 (MQ=255) tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTa < 2:3506523/93‑1 (MQ=255) tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATg < 1:1129571/93‑1 (MQ=255) agtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATggg > 2:828683/1‑93 (MQ=255) agtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATggg > 2:1298989/1‑93 (MQ=255) agtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATggg > 2:1197914/1‑93 (MQ=255) agtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGG‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATggg < 1:521336/93‑1 (MQ=255) agtcagGGAGTGGCTGACACATATATGGCAAAACCCCTGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATggg < 2:2739448/93‑1 (MQ=255) tcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt > 2:1566262/1‑93 (MQ=255) tcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt > 1:4757245/1‑93 (MQ=255) agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGGGAAAACTTAGGGCCCCCATggggtcc > 2:1508563/1‑89 (MQ=255) agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc > 1:4052741/1‑93 (MQ=255) agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc < 2:2358848/93‑1 (MQ=255) agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc < 1:619340/93‑1 (MQ=255) agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGG‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc > 2:1508564/1‑93 (MQ=255) gggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGG‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa > 2:1727812/1‑93 (MQ=255) gggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGG‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa > 2:4555456/1‑93 (MQ=255) ggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaa < 2:3183266/93‑1 (MQ=255) ggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑G‑GGCC‑TCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaa > 2:5165397/1‑93 (MQ=255) gAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa < 2:585246/93‑1 (MQ=255) gAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa < 1:5480111/93‑1 (MQ=255) aGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAg < 1:4886800/93‑1 (MQ=255) aGTGGCTGGTACATATAAGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAg < 1:1996586/93‑1 (MQ=255) gTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGt < 1:3299215/93‑1 (MQ=255) tGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTc > 1:4814745/1‑93 (MQ=255) gCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAt < 1:2671362/93‑1 (MQ=255) cTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAtt < 1:907817/93‑1 (MQ=255) tGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa > 1:1533937/1‑93 (MQ=255) tGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa > 1:4211893/1‑93 (MQ=255) tGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa < 1:5584220/93‑1 (MQ=255) ggTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTTTATGGGCTACAAAGTCATTAt < 1:4971884/93‑1 (MQ=255) ggTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt < 1:5958066/93‑1 (MQ=255) ggTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt < 2:2162068/93‑1 (MQ=255) ggTACATATATGGCAAAAGCCCGAAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt < 1:2561476/93‑1 (MQ=255) gTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc > 1:255486/1‑93 (MQ=255) gTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc > 2:1131429/1‑93 (MQ=255) gTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc < 2:3238432/93‑1 (MQ=255) gTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc > 1:3562583/1‑93 (MQ=255) gTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGAGCCTCTATGGGCTACAAAGTCATTATc > 2:235248/1‑93 (MQ=255) tACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCg < 1:4456508/93‑1 (MQ=255) tACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCg > 2:4773745/1‑93 (MQ=255) tACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCg < 2:4320497/93‑1 (MQ=255) cATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg > 2:2286091/1‑93 (MQ=255) cATATATGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg > 1:5961297/1‑93 (MQ=255) atatatGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgggg > 1:5810927/1‑93 (MQ=255) atatatGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgggg > 1:3787/1‑93 (MQ=255) atatatGGCAAAAGCCCGGAAAATCC‑GGG‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgggg > 2:802404/1‑93 (MQ=255) tatatGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa < 1:686916/93‑1 (MQ=255) tatatGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa < 1:5811190/93‑1 (MQ=255) tatatGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa < 1:3881312/93‑1 (MQ=255) tatatGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa > 2:260567/1‑93 (MQ=255) atatGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAt < 2:3942384/93‑1 (MQ=255) atagGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAt < 2:158199/93‑1 (MQ=255) tatGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAACGTCATTATCGGGGATg > 2:307469/1‑93 (MQ=255) tatGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg < 2:5639335/93‑1 (MQ=255) tGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt < 1:5699089/93‑1 (MQ=255) tGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt < 2:651666/93‑1 (MQ=255) tGGCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt < 1:6090494/93‑1 (MQ=255) gCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtta < 1:870907/93‑1 (MQ=255) gCAAAAGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtta < 1:3366842/93‑1 (MQ=255) aaaaGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt > 1:2762356/1‑93 (MQ=255) aaaGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattt < 2:417131/93‑1 (MQ=255) aaGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttt < 2:3318719/93‑1 (MQ=255) aaGCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttt > 1:3605180/1‑93 (MQ=255) aGCCCGGAAAATCC‑GGG‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttta > 2:5262722/1‑93 (MQ=255) gCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat > 2:3086145/1‑93 (MQ=255) gCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat > 2:2094205/1‑93 (MQ=255) gCCCGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat < 2:1168370/93‑1 (MQ=255) cccGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttatt > 1:469397/1‑93 (MQ=255) cccGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttatt < 1:1553052/93‑1 (MQ=255) ccGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg > 1:560076/1‑93 (MQ=255) ccGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg < 2:1736995/93‑1 (MQ=255) ccGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg < 2:3791210/93‑1 (MQ=255) cGGAAAATCCGG‑G‑‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGt < 1:2959575/93‑1 (MQ=255) | TAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑T‑G‑‑C‑TCGCAGGT‑C‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT > NC_000913/3957470‑3957627 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |