| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,007,907 | +GG | intergenic (+109/‑11) | pldB → / → b4555 | lysophospholipase L(2)/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,007,907 | 1 | . | G | 92.2% | 733.2 / 49.2 | 218 | intergenic (+109/‑11) | pldB/b4555 | lysophospholipase L(2)/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (7/10); new base G (98/103); total (105/113) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.19e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
| * | NC_000913 | 4,007,907 | 2 | . | G | 92.2% | 720.3 / 49.2 | 218 | intergenic (+109/‑11) | pldB/b4555 | lysophospholipase L(2)/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (7/10); new base G (97/103); total (105/113) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.20e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.76e-01 | |||||||||||
Only 100 of 241 total aligned reads displayed.
GTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GC‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACC > NC_000913/4007815‑4007995 || gttgttGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCg‑‑c‑‑g‑‑c‑‑gc > 2:2852694/1‑93 (MQ=255) ttgttgCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCg‑‑c‑‑g‑‑c‑‑gcg > 2:5355088/1‑92 (MQ=255) ttgttgCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCg‑‑c‑‑g‑‑c‑‑gcg < 2:5382382/93‑2 (MQ=255) ttgCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCg‑‑c‑‑g‑‑c‑‑gcggca < 1:2409349/93‑5 (MQ=255) ttgCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCg‑‑c‑‑g‑‑c‑‑gcggca > 2:5628778/1‑89 (MQ=255) cTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACt > 1:5650964/1‑93 (MQ=255) cTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACt > 1:2729426/1‑93 (MQ=255) tGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACtt > 2:4326864/1‑93 (MQ=255) tGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACtt > 1:4770032/1‑93 (MQ=255) gATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACttt < 2:1008892/93‑1 (MQ=255) tttAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTtgt > 1:2507896/1‑93 (MQ=255) tttAGATGGCACGTTAATTTCTCCCGAGCATACGTTATCACCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTtgg > 1:1517712/1‑92 (MQ=255) tAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTgtgt < 2:2680729/93‑1 (MQ=255) tAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTgtgt > 2:4567741/1‑93 (MQ=255) tAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTgtgt < 2:3092772/93‑1 (MQ=255) aGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGtt > 2:705389/1‑93 (MQ=255) gATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGttt > 1:1930036/1‑93 (MQ=255) aTGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTg < 1:687378/93‑1 (MQ=255) aTGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTg < 1:5307627/93‑1 (MQ=255) tGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGc > 2:5198404/1‑93 (MQ=255) gCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGa < 1:5043115/93‑1 (MQ=255) cACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGAc < 2:569028/93‑1 (MQ=255) cGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCg > 1:5443982/1‑93 (MQ=255) cGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCg < 2:545551/93‑1 (MQ=255) gTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCgg > 1:345489/1‑93 (MQ=255) gTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCgg > 1:1433611/1‑93 (MQ=255) ttACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGgt < 1:6062132/93‑1 (MQ=255) tACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGgtc > 1:5031950/1‑93 (MQ=255) aCTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGgtcg > 1:1013704/1‑93 (MQ=255) cTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGgtcgt < 2:2237971/93‑1 (MQ=255) cTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGgtcgt < 1:3768692/93‑1 (MQ=255) tttCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGgtcgtc > 2:3369756/1‑93 (MQ=255) tttCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGACATCAACTTTGTGTTTGCGACCGgtcgtc > 1:5392803/1‑93 (MQ=255) ttCTCCCGACCATACGTTTTCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTca > 1:2887989/1‑93 (MQ=255) tctcCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTcac < 2:2296746/93‑1 (MQ=255) tcCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCCC‑‑G‑‑C‑‑GG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTcaccg > 2:1491889/1‑92 (MQ=255) cccGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTcaccac < 2:2111790/93‑1 (MQ=255) ccGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACg < 2:4767832/93‑1 (MQ=255) cGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTAGTGTTTGCGACCGGGCGTCACCACGt > 1:5489590/1‑93 (MQ=255) gACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGtt < 1:4930589/93‑1 (MQ=255) gACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGtt > 1:1204093/1‑93 (MQ=255) aCCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTg > 2:1653441/1‑93 (MQ=255) ccATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGa < 1:4343567/93‑1 (MQ=255) ccATACGTTATCCACTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑CGGGG‑‑CATCAACTTTGTGTCTGCGACCGGTCGTCACCACGTTGa < 1:460414/93‑1 (MQ=255) cGTTATCCCATTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTgg < 2:4175267/93‑1 (MQ=255) gTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTggg < 1:2992981/93‑1 (MQ=255) ttATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTgggg > 2:2582432/1‑93 (MQ=255) ttATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTgggg > 2:3864478/1‑93 (MQ=255) tATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGc > 1:1161352/1‑93 (MQ=255) aTCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCa > 2:4783699/1‑93 (MQ=255) tCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCaa > 2:409587/1‑93 (MQ=255) ccccTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGaaaa > 1:3222974/1‑93 (MQ=255) ccccTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCaaa < 2:5557182/93‑1 (MQ=255) ccccTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCaaa < 2:4941312/93‑1 (MQ=255) ccccTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCaaa < 2:836463/93‑1 (MQ=255) cccTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAAt < 1:2100006/93‑1 (MQ=255) cTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTc > 1:3671966/1‑93 (MQ=255) tACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTcgc < 1:4652842/93‑1 (MQ=255) tACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTcgc < 1:5968217/93‑1 (MQ=255) cGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGa < 2:160920/93‑1 (MQ=255) gCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGAt < 2:3740822/93‑1 (MQ=255) ccAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATa > 1:3477861/1‑93 (MQ=255) cAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATaa < 2:1078968/93‑1 (MQ=255) cAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATaa > 1:788575/1‑93 (MQ=255) cAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATaa < 2:382801/93‑1 (MQ=255) aaaGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAAt > 1:583053/1‑93 (MQ=255) aaGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATc > 2:1706846/1‑93 (MQ=255) aGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCt < 2:3933317/93‑1 (MQ=255) gAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTg > 1:5229002/1‑93 (MQ=255) gAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTg < 1:5907996/93‑1 (MQ=255) aaaCTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTgg < 1:1549342/93‑1 (MQ=255) aaCTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGga > 2:3284101/1‑93 (MQ=255) aaCTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGga < 2:2044645/93‑1 (MQ=255) aaCTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGga < 1:4536281/93‑1 (MQ=255) aaCTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGga < 2:105218/93‑1 (MQ=255) aaCTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGga > 1:5347294/1‑93 (MQ=255) aaCTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGga > 2:3302979/1‑93 (MQ=255) tctGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGAt > 1:5081484/1‑93 (MQ=255) tGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTa < 1:4083431/93‑1 (MQ=255) gAAGCTGCTCACCG‑‑C‑‑GCAC‑‑GG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTaa < 1:5475936/93‑1 (MQ=255) gAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTaa < 2:3234756/93‑1 (MQ=255) aaGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAg < 1:2554444/93‑1 (MQ=255) aGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGCTAATCTGGAGATTAAGt > 2:1310580/1‑93 (MQ=255) aGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGt < 2:4639733/93‑1 (MQ=255) aGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAAATCGCGATAATCTGGAGATTAAGt > 1:4301358/1‑93 (MQ=255) aGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTGTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGt < 2:5950835/93‑1 (MQ=255) gctgctCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTc > 2:769262/1‑93 (MQ=255) gctgctCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTc > 2:5270429/1‑93 (MQ=255) gctgctCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTc < 2:143704/93‑1 (MQ=255) ctgctCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGCTTAAGTCt > 2:1563447/1‑93 (MQ=255) ctgctCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCt < 1:1001325/93‑1 (MQ=255) tgctCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCtt > 2:4821017/1‑93 (MQ=255) gctCACCG‑‑CGGG‑‑C‑‑GG‑‑CATCAAATTTGTGTTTGCGACCGGTAGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTa > 1:1086467/1‑93 (MQ=255) gctCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTa < 2:5422841/93‑1 (MQ=255) gctCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTa < 1:3326616/93‑1 (MQ=255) gctCACCG‑‑C‑‑G‑‑C‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTa < 2:2599361/93‑1 (MQ=255) accgcg‑‑c‑‑g‑‑c‑‑gG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATg < 1:3083372/89‑1 (MQ=255) ccgcg‑‑c‑‑g‑‑c‑‑gG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGa < 2:697684/90‑1 (MQ=255) cg‑‑c‑‑g‑‑c‑‑gG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTa < 1:2816241/93‑1 (MQ=255) g‑‑c‑‑g‑‑c‑‑gg‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGTTTAc > 2:1880644/1‑93 (MQ=255) || GTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCG‑‑C‑‑G‑‑C‑‑GC‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACC > NC_000913/4007815‑4007995 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |