BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,008,480	+A	coding (637/654 nt)	yedK →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,008,476	1	.	A	98.0%	724.4 / 5.5	195	coding (633/654 nt)	yedK	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (3/1); new base A (84/107); total (87/108)
Fisher's exact test for biased strand distribution p-value = 3.26e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 213 total aligned reads displayed.

AGCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑AA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTA  >  NC_000913/2008384‑2008563

 gCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑a                                                                                          >  1:1284935/1‑93 (MQ=255)

 gCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGGAAT‑GTT‑a                                                                                          >  2:229372/1‑93 (MQ=255)

     tAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑aa‑aaa                                                                                     <  1:5307996/93‑2 (MQ=255)

     tAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑aa‑aaa                                                                                     >  1:4331428/1‑92 (MQ=255)

        agaagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑aa‑aaacca                                                                                  >  2:438505/1‑89 (MQ=255)

        agaagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑aa‑aaacca                                                                                  <  2:2446036/93‑5 (MQ=255)

        agaagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑aa‑aaacca                                                                                  <  1:5686371/93‑5 (MQ=255)

        agaagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑aa‑aaacca                                                                                  <  1:4975522/93‑5 (MQ=255)

          aagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAgg                                                                                <  2:5406616/93‑1 (MQ=255)

          aagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAgg                                                                                <  2:2565506/93‑1 (MQ=255)

          aagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAgg                                                                                <  1:3117072/93‑1 (MQ=255)

           agCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAggg                                                                               <  2:3981935/93‑1 (MQ=255)

            gCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGgc                                                                              <  2:426743/93‑1 (MQ=255)

            gCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGgc                                                                              <  1:576461/93‑1 (MQ=255)

             ccTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGgcg                                                                             >  2:4565065/1‑93 (MQ=255)

              cTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGTACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGgcgc                                                                            >  1:2661338/1‑93 (MQ=255)

              cTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGgcgc                                                                            >  1:1367704/1‑93 (MQ=255)

               tCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGcgcg                                                                           <  2:5729393/93‑1 (MQ=255)

               tCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGcgcg                                                                           <  1:3354844/93‑1 (MQ=255)

               tCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGcgcg                                                                           <  1:775044/93‑1 (MQ=255)

               tCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGGATCGCGCGCGGAGGGTAAT‑GTTAAA‑AA‑CCAGGGcgcg                                                                           >  2:2267155/1‑93 (MQ=255)

                cAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCgg                                                                          <  2:2737355/93‑1 (MQ=255)

                 aGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGa                                                                         <  1:354522/93‑1 (MQ=255)

                  gAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAg                                                                        >  1:2336889/1‑93 (MQ=255)

                  gAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAg                                                                        <  1:5190405/93‑1 (MQ=255)

                  gAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAg                                                                        >  1:2182577/1‑93 (MQ=255)

                  gAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAg                                                                        >  1:916445/1‑93 (MQ=255)

                   aaaTCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGt                                                                       <  1:4324790/93‑1 (MQ=255)

                   aaaTCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGt                                                                       <  1:4714136/93‑1 (MQ=255)

                   aaaTCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGt                                                                       <  2:3095323/93‑1 (MQ=255)

                     aTCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTa                                                                     <  1:4948776/93‑1 (MQ=255)

                      tCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTat                                                                    >  2:1265296/1‑92 (MQ=255)

                         cgGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTc                                                                 <  2:4322003/93‑1 (MQ=255)

                          ggCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCa                                                                >  2:1701318/1‑93 (MQ=255)

                            ccAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAAc                                                              <  2:4528567/93‑1 (MQ=255)

                              aGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCt                                                            <  1:5816579/93‑1 (MQ=255)

                              aGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCt                                                            >  1:3514467/1‑93 (MQ=255)

                               gTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTg                                                           >  2:631466/1‑93 (MQ=255)

                                tGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGt                                                          >  1:338373/1‑93 (MQ=255)

                                 ggCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGtt                                                         <  2:5624992/93‑1 (MQ=255)

                                  gCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGttt                                                        >  2:739548/1‑93 (MQ=255)

                                   cTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTg                                                       <  1:5425025/93‑1 (MQ=255)

                                    tgtgTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGa                                                      >  1:4669113/1‑93 (MQ=255)

                                    tgtgTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGa                                                      >  1:163128/1‑93 (MQ=255)

                                     gtgtTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGAt                                                     <  1:3282680/93‑1 (MQ=255)

                                      tgtTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATa                                                    <  1:2785176/93‑1 (MQ=255)

                                      tgtTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑AACAA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATa                                                    >  1:2367764/1‑93 (MQ=255)

                                       gtTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATaa                                                   <  2:5657367/93‑1 (MQ=255)

                                       gtTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATaa                                                   <  2:4959278/93‑1 (MQ=255)

                                        ttCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGGTA‑AA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGCTTGATAAg                                                  >  2:5475687/1‑93 (MQ=255)

                                        ttCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAg                                                  <  1:424355/93‑1 (MQ=255)

                                        ttCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAg                                                  >  1:1867138/1‑93 (MQ=255)

                                         tCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGc                                                 <  1:4265770/93‑1 (MQ=255)

                                         tCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGc                                                 <  2:873883/93‑1 (MQ=255)

                                           cAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCt                                               <  1:6034573/93‑1 (MQ=255)

                                            aGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTg                                              <  1:3187585/93‑1 (MQ=255)

                                            aGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCACGGCGCGGAGTTAATTCAACCTGTTTGATAAGccgg                                              >  2:3286243/1‑91 (MQ=255)

                                              cAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGga                                            >  2:3760031/1‑93 (MQ=255)

                                                aaCCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGgaga                                          <  1:4509370/93‑1 (MQ=255)

                                                aaCCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGgaga                                          >  1:5254414/1‑93 (MQ=255)

                                                 aCCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGat                                         >  1:5232607/1‑93 (MQ=255)

                                                  ccAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGatt                                        >  2:3512115/1‑93 (MQ=255)

                                                   cAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGatta                                       >  2:2017442/1‑93 (MQ=255)

                                                   cAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGatta                                       <  2:5595124/93‑1 (MQ=255)

                                                    aGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGattat                                      >  1:191442/1‑93 (MQ=255)

                                                     gTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGattatt                                     <  2:5405703/93‑1 (MQ=255)

                                                     gTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGattatt                                     <  1:5931110/93‑1 (MQ=255)

                                                      ttCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTg                                    <  2:1583640/93‑1 (MQ=255)

                                                      ttCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTg                                    <  1:2252721/93‑1 (MQ=255)

                                                      ttCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTg                                    <  1:1004666/93‑1 (MQ=255)

                                                       tctcCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGa                                   <  2:772051/93‑1 (MQ=255)

                                                            tGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATcaaa                              >  2:4728618/1‑92 (MQ=255)

                                                             ggCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATcaaca                             <  2:616052/93‑1 (MQ=255)

                                                             ggCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATcaaca                             <  2:2071264/93‑1 (MQ=255)

                                                              gCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATcaacaa                            <  1:1593464/93‑1 (MQ=255)

                                                              gCACCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATcaacaa                            <  2:767047/93‑1 (MQ=255)

                                                                aCCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATa                          >  1:1436419/1‑93 (MQ=255)

                                                                aCCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATa                          <  2:5275430/93‑1 (MQ=255)

                                                                aCCCGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATa                          <  1:3738304/93‑1 (MQ=255)

                                                                 cccGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATAc                         <  2:4141307/93‑1 (MQ=255)

                                                                  ccGGTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACt                        <  1:6109751/93‑1 (MQ=255)

                                                                     gTATCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCg                     >  1:5597073/1‑93 (MQ=255)

                                                                       aTCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTc                   >  1:213318/1‑93 (MQ=255)

                                                                       aTCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTc                   <  2:2258688/93‑1 (MQ=255)

                                                                        tCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCa                  >  1:5148107/1‑93 (MQ=255)

                                                                        tCGCGCGCGGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCa                  >  1:5975445/1‑93 (MQ=255)

                                                                         cgcgcgcgGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCAt                 <  1:997840/93‑1 (MQ=255)

                                                                          gcgcgcgGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATa                >  2:3696126/1‑93 (MQ=255)

                                                                               cgGTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGaaa           <  1:4428961/93‑1 (MQ=255)

                                                                                ggTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAt          >  2:4774999/1‑93 (MQ=255)

                                                                                 gTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtc         <  2:3235101/93‑1 (MQ=255)

                                                                                 gTGGGTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtc         <  2:951245/93‑1 (MQ=255)

                                                                                   gggTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtctc       <  1:4137184/93‑1 (MQ=255)

                                                                                   gggTAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtctc       >  1:3627455/1‑93 (MQ=255)

                                                                                   gggTAAT‑GTT‑AA‑AAGCCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtctc       <  2:5903911/93‑1 (MQ=255)

                                                                                      tAAT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTAt    >  2:3933158/1‑93 (MQ=255)

                                                                                       aaT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTAtt   <  1:3801534/93‑1 (MQ=255)

                                                                                        aT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTa  >  2:3433348/1‑93 (MQ=255)

                                                                                        aT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTa  >  2:3856118/1‑93 (MQ=255)

                                                                                        aT‑GTTAAA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTa  >  1:2575964/1‑93 (MQ=255)

AGCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAAT‑GTT‑AA‑AA‑CCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTA  >  NC_000913/2008384‑2008563

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`