New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 48355587 (0.400)131 (0.580)
+CCC
80/166 2.0 60.1% coding (73/3150 nt) acrB acridine efflux pump
?NC_000913 483556 = 87 (0.370)coding (72/3150 nt) acrB acridine efflux pump

Only 100 of 151 total aligned reads displayed.

TCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/483465‑483555
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTTA  >  NC_000913/483556‑483647
                                                                                           |||                                                                                            
TCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCC                                                                                               <  1:5758275/93‑1
   CATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCC                                                                                            >  1:155136/1‑93
   CATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCC                                                                                            <  2:5474676/93‑1
    ATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCC                                                                                           >  2:3985138/1‑93
    ATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCC                                                                                           >  2:4927528/1‑93
    ATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCC                                                                                           >  2:3118439/1‑93
    ATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCCGCAGCCCCac                                                                                           >  1:275480/1‑91
     TCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCC                                                                                          >  2:2580324/1‑93
     TCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCC                                                                                          <  1:5927065/93‑1
      CAGCGCCGGGGTAGGAGGCGGAGATCGTTCCTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGTATCTCCAGCCCCCCCt                                                                                         <  1:5614582/93‑2
      CAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCt                                                                                         <  1:5614583/93‑2
      CAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCC                                                                                         <  2:333944/93‑1
       AGCGCGGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCC                                                                                        <  1:2364363/93‑1
       AGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCC                                                                                        <  1:1556289/93‑1
        GCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCT                                                                                       <  1:4587850/93‑1
          GCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCtgcc                                                                                     >  2:2334554/1‑89
              GGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCCAC                                                                                 >  1:5768383/1‑93
                  AGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGA                                                                             <  1:1651438/93‑1
                  AGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGA                                                                             <  1:1394745/93‑1
                   GGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGAT                                                                            >  2:1387596/1‑93
                   GGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGAT                                                                            <  2:4961849/93‑1
                       GCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCCCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATA                                                                        <  2:3400641/93‑1
                          GAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATG                                                                     <  2:4665289/93‑1
                          GAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATG                                                                     >  2:5849885/1‑93
                          GAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATG                                                                     >  2:3400958/1‑93
                           AGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGG                                                                    <  2:5407456/93‑1
                            GATCGTTCCTGCCGGCGGTGCAATCGTGGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGC                                                                   <  2:1854489/93‑1
                            GATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGC                                                                   >  2:4901933/1‑93
                            GATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGC                                                                   <  2:4704894/93‑1
                               CGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGAT                                                                >  1:3153006/1‑93
                               CGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGAT                                                                <  1:6112947/93‑1
                                gtgACTGCCGTGGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATC                                                               <  1:3854888/90‑1
                                GTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATC                                                               >  2:448433/1‑93
                                     TGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCA                                                          <  2:6120152/93‑1
                                     TGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCA                                                          >  2:1080639/1‑93
                                       CCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACG                                                        >  1:579200/1‑93
                                         GGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCA                                                      >  1:3115157/1‑93
                                         GGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACCCA                                                      >  1:4039215/1‑93
                                              TGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAAT                                                 <  1:5461654/93‑1
                                              TGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAAT                                                 <  1:3634803/93‑1
                                               aCAATCTTAGAATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATC                                                <  1:5753528/92‑1
                                               GCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACACACGCAAAAATC                                                >  1:3005080/1‑93
                                                gAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCG                                               <  2:4993737/92‑1
                                                CAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCG                                               <  2:1897994/93‑1
                                                CAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCG                                               <  2:370066/93‑1
                                                 AATCGTAGGATATTGCGCCGCCGGCAGTTTGAGGATCGCCGGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGG                                              <  1:1774372/93‑1
                                                 AATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCCCGCAAAAATCGG                                              >  1:4424572/1‑93
                                                  ATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGG                                             >  2:484960/1‑93
                                                  ATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGG                                             <  1:2453234/93‑1
                                                   TCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGC                                            <  2:389686/93‑1
                                                    tggAGGATATTTCGCCCCCGGGAGTTTGAGGAACGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCG                                           <  1:5956193/90‑1
                                                    CGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAACATCGGGCG                                           >  1:745118/1‑93
                                                     GTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGA                                          >  1:262029/1‑93
                                                      agGGATATTGCGCCACCGGCAGTTTGAGGGTCGCCGGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGAT                                         <  2:5467433/91‑1
                                                      TAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGAT                                         <  2:4403612/93‑1
                                                       AGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATC                                        >  2:2922744/1‑93
                                                       AGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATC                                        >  2:740602/1‑93
                                                        GGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCCACATGATGATAAAGGCGATCACCCACGCAAAAATCCGGCGATCG                                       >  2:4730342/1‑93
                                                        GGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCCAAAATCGGGCGATCG                                       >  2:3127531/1‑93
                                                        GGATATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCG                                       >  1:4321898/1‑93
                                                         GATATTGCGCCACCGGCATTTTGAGGATGGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGA                                      <  2:2498788/93‑1
                                                          ATAGTGCGCCCCCCGCATTTTGAGGACCGGCCGCCCCCCCCCTGCAAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGAT                                     <  1:3825241/93‑1
                                                           TATTGCGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATA                                    <  2:2476793/93‑1
                                                            ATTGCCCCACCGTCATTTTGAGGATCGCCATCCCCCCCCCTGCCAACATGATGATAATGGCGATCCCCCACGCAAAAATCGGGCGATCGATAA                                   <  1:490276/93‑1
                                                            ATTGAGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGACCACCCCCGCAAAAATCGGGCGATCGATAA                                   >  1:1066645/1‑93
                                                               GCGCCCCCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGA                                <  1:1606632/93‑1
                                                                CGCCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAA                               <  1:5389741/93‑1
                                                                  CCACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAAT                             <  2:5886789/93‑1
                                                                  CCACCGGCAGTTTGAGAATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAAT                             <  1:3656575/93‑1
                                                                   CACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATT                            >  1:5552072/1‑93
                                                                    cCCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTA                           <  1:4864894/92‑1
                                                                    ACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGGTCGAGAAAGAAATTt                           >  2:4603990/1‑92
                                                                    ACCGGCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTA                           <  1:2621236/93‑1
                                                                        GCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCA                       >  2:3841508/1‑93
                                                                        GCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCA                       >  2:5673844/1‑93
                                                                        GCAGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCA                       <  1:765077/93‑1
                                                                          AGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATG                     >  1:5168256/1‑93
                                                                          AGTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATG                     >  2:1179058/1‑93
                                                                           GTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGT                    >  2:240080/1‑93
                                                                           GTTTGAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGT                    >  2:290123/1‑93
                                                                               GAGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTA                <  1:3417998/93‑1
                                                                                AGGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAA               >  1:247960/1‑93
                                                                                 GGATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAAGCGGGCGATCGATAAAGAAATTAGGCATGTCTTAAC              <  1:6060112/93‑1
                                                                                 GGATCCCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAAC              <  2:5306739/93‑1
                                                                                  GATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACG             >  1:2386749/1‑93
                                                                                  GATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACG             <  2:3675876/93‑1
                                                                                  GATCGCCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACG             <  1:1239421/93‑1
                                                                                       CCAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCC        <  2:5065838/93‑1
                                                                                        CAGCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCT       <  2:1714098/93‑1
                                                                                         ccagCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTG      <  2:4253264/89‑1
                                                                                          GCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGTTCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGT     <  1:6139860/93‑1
                                                                                          GCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGT     <  1:3395449/93‑1
                                                                                          GCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGT     <  1:6139859/93‑1
                                                                                          GCCCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGT     >  1:1017186/1‑93
                                                                                           agCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTT    >  2:409246/3‑93
                                                                                           agCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTT    <  1:2411159/91‑1
                                                                                            gCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTT   >  2:3949150/2‑93
                                                                                             CCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTTA  >  2:3222697/1‑93
                                                                                             CCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTTA  <  2:1453690/93‑1
                                                                                             CCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTTA  >  2:254870/1‑93
                                                                                           |||                                                                                            
TCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/483465‑483555
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTTA  >  NC_000913/483556‑483647

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.