| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4008398 | 53 (0.230) | 56 (0.250) +AAGA |
25/172 | 13.2 | 52.2% | coding (481/516 nt) | b4555 | hypothetical protein |
| ? | NC_000913 | 4008399 = | 53 (0.230) | coding (482/516 nt) | b4555 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
GCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑C‑AA‑AGGCCATGCGCTGG‑AA‑G‑GCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4008309‑4008398‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACT‑GGCTACAG‑CTGAAGGATT > NC_000913/4008399‑4008420 |||| GCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGA < 2:1055363/93‑1 GATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAG > 2:5666223/1‑93 GATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAG > 1:2245207/1‑93 GATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AAGCCATGCGCTGG‑AA‑GCGGTGGCGAAG > 1:383212/1‑93 ATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTTCC‑AA‑AGGCCATGCGCTGG‑GA‑GCGGTGGCGAAGA > 2:5218446/1‑93 ATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGA < 1:4210164/93‑1 ATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑GTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGA > 2:3437448/1‑93 ATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGA‑G‑ATT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGA > 2:5286486/1‑93 TCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAA < 1:2952901/93‑1 TCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAA < 2:1335952/93‑1 TCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAA > 1:6051407/1‑93 GCGTGAACGTCAGTTTCTCTACCTTAGCCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAAC < 1:2062312/93‑1 CGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCCTGCGCTGG‑AA‑GCGGTGGCGAAGAAACT > 2:438226/1‑93 CGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACT < 2:2388436/93‑1 CGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACT < 1:3143163/93‑1 CGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGA‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑CA‑GCGGTGGCGAAGAAACT > 2:438228/1‑93 GTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑GA‑GCGGGGGCGAAGAAACT‑G > 1:2017621/1‑93 GTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGGGAAGAAAgcg > 2:1898803/1‑90 GTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACT‑G < 1:462204/93‑1 GTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACT‑G < 1:4663259/93‑1 GTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACT‑G > 1:5668303/1‑93 GTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑GTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGGGGCGAAGAAACT‑G > 2:3182119/1‑93 TCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGG‑TTC‑C‑AA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGGAGAAACT‑GG > 1:3137003/1‑93 TCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑ATGCCATGTGCTGG‑AATC‑GGTGGCGAAGAAACTag > 1:2323454/1‑91 TCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑GTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGGGGCGAAGAAACT‑GG > 2:5695134/1‑93 TCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑GTT‑CAAA‑AAGCCATGCGCTGG‑GA‑GCGGTGGCGGAGAAACT‑GG > 2:2035288/1‑93 CAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACT‑GGg > 1:3960239/1‑92 AACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑GTTTT‑A‑AA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACC‑GGgc > 1:5458783/1‑91 AACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGGGAAGAAACT‑GGgt > 1:2272214/1‑91 AACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACT‑GGgc < 1:605028/93‑3 AACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACT‑GGgc > 1:4992451/1‑91 AACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AAGCCATGGGCTGGAAA‑G‑GGGGGGGAAGAAACT‑GGCT > 1:4992450/1‑93 ACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAACAT‑GGCgt > 2:2196420/1‑91 ACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACT‑GGgct < 1:3654700/93‑4 CGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACT‑GGgcta < 1:3452795/93‑5 CGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACT‑GGgcta > 2:4555384/1‑89 TCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACTGGGCTACA > 2:3991879/1‑93 TCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACTGGGCTACA < 1:2494064/93‑1 CAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACTGGGCTACAG < 2:585775/93‑1 CAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACTGGGCTACAG > 2:3772198/1‑93 AGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACTGGGCTACAG‑C < 2:1813556/93‑1 GTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACTGGGCTACAG‑Cc < 2:2165889/93‑2 GTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACTGGGCTACAG‑Cc < 2:3075079/93‑2 GTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACTGGGCTACAG‑Cc > 1:675925/1‑92 TTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACTGGGCTACAG‑Cctg > 1:2730702/1‑90 TTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACTGGGCTACAG‑Cctg > 1:4951605/1‑90 TCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACTGGGCTACAG‑Cctga < 2:5759295/93‑5 TCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACTGGGCTACAG‑Cctga > 2:599143/1‑89 TCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACTGGGCTACAG‑Cctga < 2:1407371/93‑5 TCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACTGGGCTACAG‑Cctga < 1:433325/93‑5 TCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACTGGGCTACAGCCTGAAG > 2:5232739/1‑93 CTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGG < 1:2348776/93‑1 CTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGG < 2:5702479/93‑1 TACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGA < 1:1440534/93‑1 TACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGA > 1:4940918/1‑93 TACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑C‑AAGAGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGA < 1:2601550/93‑1 CCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑CAAA‑AGGCCATGCGCTGG‑AA‑GCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATT < 2:5655588/93‑1 |||| GCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGC‑G‑TTT‑C‑AA‑AGGCCATGCGCTGG‑AA‑G‑GCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4008309‑4008398‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACT‑GGCTACAG‑CTGAAGGATT > NC_000913/4008399‑4008420 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |