BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 279335	NA (NA)	238 (1.020)	121/184	0.2	97.1%	coding (252/339 nt)	b4505	hypothetical protein
*	?	NC_000913	370982 =	7 (0.030)	238 (1.020)	121/184	0.2	97.1%	coding (535/882 nt)	mhpC	2‑hydroxy‑6‑ketonona‑2,4‑dienedioic acid hydrolase

Only 100 of 193 total aligned reads displayed.

CAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTGACTGTTCTTT  >  NC_000913/279245‑279427

cAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAGCACCGAAAGAGATAATTGAAAGGGGTGTGGCATTGACAGATTGAATCTAcagc                                                                                            <  2:3046366/93‑1 (MQ=9)

cAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTAcagc                                                                                            >  1:4047584/1‑93 (MQ=31)

  gCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTAcagcag                                                                                          <  1:5931622/93‑1 (MQ=33)

   cTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACagcagc                                                                                         >  2:580113/1‑93 (MQ=33)

   cTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACagcagc                                                                                         <  2:2216805/93‑1 (MQ=33)

    tAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCt                                                                                        >  2:4710140/1‑93 (MQ=34)

    tAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGGGTTGCATTGACAGATTGAATCTACAGCAGCt                                                                                        >  2:1935698/1‑93 (MQ=21)

     aaaCAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCtt                                                                                       >  1:115773/1‑93 (MQ=35)

      aacaacAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCttt                                                                                      <  2:2579120/93‑1 (MQ=38)

       acaacaGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCtttt                                                                                     >  1:2777486/1‑93 (MQ=37)

       acaacaGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCtttt                                                                                     >  1:527149/1‑93 (MQ=37)

          acaGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCttttttt                                                                                  >  2:6045709/1‑93 (MQ=38)

          acaGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCttttttt                                                                                  >  2:1211374/1‑93 (MQ=38)

           caGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTa                                                                                 >  2:1034249/1‑93 (MQ=39)

           caGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTa                                                                                 <  1:6045542/93‑1 (MQ=39)

           caGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTa                                                                                 <  1:2267487/93‑1 (MQ=39)

            aGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTaa                                                                                >  2:5916924/1‑93 (MQ=40)

            aGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTaa                                                                                <  1:3261833/93‑1 (MQ=255)

            aGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTaa                                                                                >  1:3923363/1‑93 (MQ=40)

             gACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAat                                                                               >  1:138747/1‑93 (MQ=255)

              aCCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAata                                                                              <  1:2128883/93‑1 (MQ=255)

              aCCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAata                                                                              <  1:426491/93‑1 (MQ=255)

               ccGAGAAAGACACTGAAGTTCAAAACTCCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAatat                                                                             <  2:3286136/93‑1 (MQ=255)

               ccGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAatat                                                                             >  2:5195321/1‑93 (MQ=255)

               ccGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAatat                                                                             >  1:2941373/1‑93 (MQ=255)

                cGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATg                                                                            <  2:5064411/93‑1 (MQ=255)

                 gagaAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGt                                                                           <  2:1469329/93‑1 (MQ=255)

                  agaAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTc                                                                          >  2:828217/1‑93 (MQ=255)

                  agaAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTc                                                                          <  2:1178566/93‑1 (MQ=255)

                  agaAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTc                                                                          <  1:4985734/93‑1 (MQ=255)

                  agaAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTc                                                                          <  1:3175109/93‑1 (MQ=255)

                   gaAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTcc                                                                         <  1:4675149/93‑1 (MQ=255)

                   gaAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTcc                                                                         <  2:4168474/93‑1 (MQ=255)

                   gaAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTcc                                                                         >  2:2511245/1‑93 (MQ=255)

                    aaaGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTccc                                                                        <  1:553135/93‑1 (MQ=255)

                       gACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGtt                                                                     <  1:2637839/93‑1 (MQ=255)

                       gACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGtt                                                                     >  1:5504401/1‑93 (MQ=255)

                          acTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTtcgt                                                                  >  2:6111782/1‑93 (MQ=255)

                           cTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTtcgtc                                                                 <  2:2267158/93‑1 (MQ=255)

                             gAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCgg                                                               >  2:1371485/1‑93 (MQ=255)

                             gAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCgg                                                               >  2:125937/1‑93 (MQ=255)

                              aaGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGt                                                              <  2:4340802/93‑1 (MQ=255)

                                 ttCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAAc                                                           >  2:2069746/1‑93 (MQ=255)

                                 ttCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAAc                                                           >  1:3054186/1‑93 (MQ=255)

                                  tCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAAcc                                                          <  2:3754192/93‑1 (MQ=255)

                                  tCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAAcc                                                          <  2:3106616/93‑1 (MQ=255)

                                  tCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAAcc                                                          >  2:2892786/1‑93 (MQ=255)

                                  tCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAAcc                                                          <  2:1337385/93‑1 (MQ=255)

                                   cAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAAccc                                                         <  2:2736250/93‑1 (MQ=255)

                                   cAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAAccc                                                         <  2:2146061/93‑1 (MQ=255)

                                   cAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAAccc                                                         >  1:4715572/1‑93 (MQ=255)

                                     aaaCACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACACGt                                                       >  1:5529446/1‑93 (MQ=255)

                                     aaaCACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACGAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGt                                                       <  2:1398602/93‑1 (MQ=255)

                                           cGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGc                                                 >  2:665167/1‑93 (MQ=255)

                                             aaaGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGctc                                               >  1:5314519/1‑93 (MQ=255)

                                               agagATAATTGAAAGGGGTGTTTCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCtt                                             <  2:4438353/93‑1 (MQ=255)

                                               agagATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCtt                                             <  1:805895/93‑1 (MQ=255)

                                               agagATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCCGTAACCCGTTTCAGCTCtt                                             >  1:168610/1‑93 (MQ=255)

                                                gagaTAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCttt                                            <  1:681896/93‑1 (MQ=255)

                                                  gaTAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCt                                          >  1:4287745/1‑93 (MQ=255)

                                                   aTAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTg                                         >  1:1802347/1‑93 (MQ=255)

                                                   aTAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTg                                         <  2:342952/93‑1 (MQ=255)

                                                   aTAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTg                                         >  1:4319642/1‑93 (MQ=255)

                                                     aaTTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGga                                       <  1:3392646/93‑1 (MQ=255)

                                                     aaTTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGga                                       <  2:393186/93‑1 (MQ=255)

                                                     aaTTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGga                                       <  1:390536/93‑1 (MQ=255)

                                                     aaTTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGga                                       >  1:3464109/1‑93 (MQ=255)

                                                       ttGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGgaga                                     <  2:793972/93‑1 (MQ=255)

                                                       ttGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGgaga                                     <  1:4839298/93‑1 (MQ=255)

                                                         gAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGAcg                                   >  2:5562770/1‑93 (MQ=255)

                                                         gAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGAcg                                   >  1:2501570/1‑93 (MQ=255)

                                                          aaaGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGAcgg                                  <  2:4311328/93‑1 (MQ=255)

                                                           aaGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTGTTTCTCGAGCcggc                                 >  2:2667834/1‑93 (MQ=255)

                                                           aaGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGAcggc                                 >  1:1253510/1‑93 (MQ=255)

                                                             ggggTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGAcggcgg                               >  2:702193/1‑93 (MQ=255)

                                                               ggTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGAt                             >  1:4455246/1‑93 (MQ=255)

                                                               ggTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGAt                             >  1:5835962/1‑93 (MQ=255)

                                                                gtgtTGCATTGACAGATTGAATCTACAGCAGCTTTGTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGAtc                            <  2:3686075/93‑1 (MQ=255)

                                                                 tgtTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGAtct                           >  1:5109163/1‑93 (MQ=255)

                                                                  gtTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGAtctc                          <  2:2618242/93‑1 (MQ=255)

                                                                    tGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCgg                        >  1:3891915/1‑93 (MQ=255)

                                                                      cATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGcc                      <  1:5428993/93‑1 (MQ=255)

                                                                       aTTGACAGATTAAATCTACAGCAGCTTTATTTAATATGACCCGTTCGTCGGTACCCCGTTTCAGCTCTATCTGGAGACGGCGGATCTCGGCCt                     <  1:5643194/93‑1 (MQ=255)

                                                                         tGACAGATTTAATCTACAGCAGCTTTTTTTAATATGGCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGa                   <  2:1516871/93‑1 (MQ=255)

                                                                         tGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGa                   <  1:3630666/93‑1 (MQ=255)

                                                                         tGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGa                   <  1:229759/93‑1 (MQ=255)

                                                                          gACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAg                  >  1:1052947/1‑93 (MQ=255)

                                                                           aCAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGc                 >  2:1553663/1‑93 (MQ=255)

                                                                              gATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATc              >  2:578351/1‑93 (MQ=255)

                                                                              gATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATc              >  1:5410225/1‑93 (MQ=255)

                                                                              gATTGAATCTACAGCAGATTTTTTTAATATGTCCCGTTAGTCGGTAACCCGTTTCAGCTCATTCTGGAGACGGCGGATCTCGGACTGAGAATc              >  2:534727/1‑93 (MQ=255)

                                                                               aTTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCt             <  1:1556365/93‑1 (MQ=255)

                                                                               aTTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCt             <  2:2491297/93‑1 (MQ=255)

                                                                                ttGAATCTACAGCAGCTTTTTTTAATATGTGCCGTTCGTCGGTTACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTg            >  1:3355594/1‑93 (MQ=255)

                                                                                ttGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGCGCATCTg            >  2:5445479/1‑93 (MQ=255)

                                                                                ttGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTg            >  2:4672123/1‑93 (MQ=255)

                                                                                    aTCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTGACTg        <  1:3404163/93‑1 (MQ=255)

                                                                                       tACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTGACTGTTc     >  2:5299014/1‑93 (MQ=255)

                                                                                        aCAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTGACTGTTCt    <  1:3032661/93‑1 (MQ=255)

                                                                                         cagcagCTTTTTTTAGTATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTGACTGTTCtt   <  1:3724876/93‑1 (MQ=255)

CAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTGACTGTTCTTT  >  NC_000913/279245‑279427

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.