BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	580,747	0	G	A	67.3%	1127.9 / inf	834	Q57Q (CAG→CAA)	ybcX	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (155/118); new base A (239/322); total (394/440)
Fisher's exact test for biased strand distribution p-value = 1.59e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.64e-02
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 858 total aligned reads displayed.

CCACAGACCGCCGTTGAATGGGCGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAATGCTGCTGGG  >  NC_000913/580655‑580839

  acaGACCGCCGTTGAATGGGCGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCg                                                                                            <  1:2273607/93‑1 (MQ=255)

      aCCGCCGTTGAATGGGCGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGcc                                                                                        >  1:4198149/1‑93 (MQ=255)

         gcggTTGAATGGGCAGACGATAATTACTATCTGCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCgatc                                                                                     <  2:1100979/90‑1 (MQ=255)

         gccgTTGAATGGGCGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCcatc                                                                                     >  1:5419102/1‑93 (MQ=255)

          gggTTGAATGGGCAGACGATAATTACTATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCgatca                                                                                    <  2:5319190/91‑1 (MQ=255)

          cggTTGAATGGGCAGACGATAATTACTATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCgatca                                                                                    <  2:2161345/91‑1 (MQ=255)

          cggTTGAATGGGCAGACGATAATTACTATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCgatca                                                                                    >  1:5991119/3‑93 (MQ=255)

             ttGAATGGGCAGACGATAATTACTATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGa                                                                                 <  2:5434357/93‑1 (MQ=255)

             ttGAATGGGCAGACGATAATTACTATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGa                                                                                 >  2:4636886/1‑93 (MQ=255)

             ttGAATGGGCAGACGATAATTACTATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGa                                                                                 <  2:5638939/93‑1 (MQ=255)

              tGAATGGGCGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGaa                                                                                <  2:1226572/93‑1 (MQ=255)

              tGAATGGGCAGACGATAATTACTATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGaa                                                                                <  1:1781061/93‑1 (MQ=255)

              tGAATGGGCAGACGATAATTACTATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGaa                                                                                <  2:478231/93‑1 (MQ=255)

              tGAATGGGCAGACGATAATTACTATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGaa                                                                                <  2:3396945/93‑1 (MQ=255)

               gAATGGGCAGACGATAATTACTATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAAt                                                                               >  2:3759046/1‑93 (MQ=255)

               gAATGGGCAGACGATAATTACTATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTCGCCGTTTCAACGCGCGATCATGAAt                                                                               <  1:5507620/93‑1 (MQ=255)

                   gggCAGACGATAATTACTATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGa                                                                           <  1:5013661/93‑1 (MQ=255)

                   gggCAGACGATAATTACTATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGa                                                                           <  1:2340263/93‑1 (MQ=255)

                   gggCAGACGATAATTACTATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGa                                                                           <  1:737309/93‑1 (MQ=255)

                   gggCAGACGATAATTACTATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGa                                                                           <  1:3842000/93‑1 (MQ=255)

                    ggCGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGCCCATCATGAATGCGAt                                                                          >  1:5116826/1‑93 (MQ=255)

                       ggATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATggg                                                                       <  1:1931702/93‑1 (MQ=255)

                              aaTTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGTCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGAc                                                                >  2:4142117/1‑93 (MQ=255)

                              aaTTACTATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGat                                                                >  2:5065855/1‑92 (MQ=255)

                               aTTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACt                                                               >  1:1598459/1‑93 (MQ=255)

                               aTTACTATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGatt                                                               <  1:2196357/93‑3 (MQ=255)

                                ttACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTa                                                              >  1:353632/1‑93 (MQ=255)

                                ttACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATAATGAATGCGATGGGAAGGGACtc                                                              >  2:45015/1‑92 (MQ=255)

                                ttACTATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTa                                                              >  2:5021505/1‑93 (MQ=255)

                                    tATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACAta                                                          <  2:4038286/93‑2 (MQ=255)

                                    tATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACAta                                                          <  2:5547155/93‑2 (MQ=255)

                                     aTCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATcc                                                         <  2:28603/93‑1 (MQ=255)

                                     aTCGCCCCAAAGAGTCGGCCTACCAGGAAGGGTGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACAtac                                                         <  1:2798434/93‑3 (MQ=255)

                                      tctcCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACg                                                        >  2:3196247/1‑93 (MQ=255)

                                      tctcCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACg                                                        <  2:5972109/93‑1 (MQ=255)

                                       ctcCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACgg                                                       >  2:1901288/1‑92 (MQ=255)

                                       ctcCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGt                                                       >  2:883758/1‑93 (MQ=255)

                                       ctcCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGt                                                       <  2:680499/93‑1 (MQ=255)

                                        tcCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTg                                                      >  1:3238725/1‑93 (MQ=255)

                                        tcCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTg                                                      >  1:5790044/1‑93 (MQ=255)

                                         ccccAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGa                                                     <  2:433446/93‑1 (MQ=255)

                                         ccccAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGa                                                     <  1:4807892/93‑1 (MQ=255)

                                         ccccAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGa                                                     <  2:1460663/93‑1 (MQ=255)

                                         ccccAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGGTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGa                                                     <  2:4446381/93‑1 (MQ=255)

                                          cccaaaGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAg                                                    >  1:5323600/4‑93 (MQ=255)

                                          cccaaaGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAg                                                    >  1:3985018/4‑93 (MQ=255)

                                          cccaaaGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAg                                                    <  1:4113895/90‑1 (MQ=255)

                                          cccaaaGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGGAACGATTACATACGTGAg                                                    >  1:4472990/4‑93 (MQ=255)

                                           ccaaaGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAgg                                                   <  2:3268938/91‑1 (MQ=255)

                                            caaaGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGt                                                  >  1:2958562/2‑93 (MQ=255)

                                             aaaGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGtc                                                 <  1:4936208/93‑2 (MQ=255)

                                             aaaGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTg                                                 >  1:2514694/1‑93 (MQ=255)

                                              aaGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGa                                                <  1:1546652/93‑1 (MQ=255)

                                                gAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAAt                                              >  2:1971142/1‑93 (MQ=255)

                                                    ccGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATgtgg                                          <  2:4860547/93‑1 (MQ=255)

                                                     ggcctACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACgttgt                                         >  1:3931707/5‑93 (MQ=255)

                                                     ggcctACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACgttgt                                         >  1:858724/5‑93 (MQ=255)

                                                     ggcctACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGAAACGATTAAATACGTGAGGTCAACgttgt                                         >  2:5173522/5‑93 (MQ=255)

                                                      gcctACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACgttgtt                                        >  1:2742663/4‑92 (MQ=255)

                                                       cATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGa                                       >  1:1389489/1‑93 (MQ=255)

                                                        ctACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTaa                                      >  2:4691322/2‑93 (MQ=255)

                                                         tACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAg                                     >  2:307677/1‑93 (MQ=255)

                                                         tACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAg                                     >  1:3317046/1‑93 (MQ=255)

                                                         tACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAg                                     <  1:31004/93‑1 (MQ=255)

                                                          aCCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGt                                    >  2:262400/1‑93 (MQ=255)

                                                           ccAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTc                                   <  2:1356246/93‑1 (MQ=255)

                                                            cAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATTGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCt                                  <  2:2276532/93‑1 (MQ=255)

                                                             aGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTg                                 >  1:5683718/1‑93 (MQ=255)

                                                              ggAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGc                                <  2:3024449/93‑1 (MQ=255)

                                                              ggAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGc                                >  1:616920/1‑93 (MQ=255)

                                                              ggAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGc                                >  1:1204904/1‑93 (MQ=255)

                                                              ggAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGc                                >  1:3755142/1‑93 (MQ=255)

                                                               gAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGcc                               >  1:4574502/1‑93 (MQ=255)

                                                               gAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGcc                               >  2:5853570/1‑93 (MQ=255)

                                                               gAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGcc                               >  2:2510959/1‑93 (MQ=255)

                                                                  gggCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCgt                            <  2:3914320/93‑1 (MQ=255)

                                                                   ggCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCgtg                           <  1:2049669/93‑1 (MQ=255)

                                                                    gcgcTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCgtgt                          <  1:2613127/93‑1 (MQ=255)

                                                                    gcgcTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCgtgt                          >  2:1688276/1‑93 (MQ=255)

                                                                      gcTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCgtgttg                        >  2:2724433/1‑91 (MQ=255)

                                                                      gcTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCgtgttg                        <  2:763461/93‑3 (MQ=255)

                                                                      gcTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCg                        >  1:4374254/1‑93 (MQ=255)

                                                                       cTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTgg                       <  1:289571/93‑1 (MQ=255)

                                                                       cTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCgg                       <  1:4705273/93‑1 (MQ=255)

                                                                        tGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTggc                      <  1:1081075/93‑2 (MQ=255)

                                                                                 ttGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCaaaa             <  2:5796970/92‑1 (MQ=255)

                                                                                  tGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAaaaa            >  2:5239678/1‑93 (MQ=255)

                                                                                  tGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAaaaa            <  2:1844500/93‑1 (MQ=255)

                                                                                   gCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAAt           <  1:5221541/93‑1 (MQ=255)

                                                                                     cgtttCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAAtgt         <  2:1771281/91‑2 (MQ=255)

                                                                                     ccTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGGCCGTGTCGGTTATTCCAAAAtgc         >  2:2430490/1‑93 (MQ=255)

                                                                                     ccTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGAGGTGAAGTCTGCCCGTGACGGTTATTCCAAAAtgc         >  2:1558442/1‑93 (MQ=255)

                                                                                      gtttCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAAtgtt        >  2:3828195/2‑91 (MQ=255)

                                                                                      gtttCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAAtgtt        >  1:698594/2‑91 (MQ=255)

                                                                                       tttCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAAtgttg       >  1:942106/1‑93 (MQ=255)

                                                                                        ttCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAAtgttgc      <  2:3530879/93‑1 (MQ=255)

                                                                                         tCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTATGCCCGTGTTGGCTATTCAAAAATgttgct     >  1:5893127/1‑93 (MQ=255)

                                                                                           aGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAATGCTGCTgg   >  2:3671271/1‑93 (MQ=255)

                                                                                           aGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAATGCTGCTgg   <  2:6027642/93‑1 (MQ=255)

                                                                                            gCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAATGCTGCTggg  <  1:4246725/93‑1 (MQ=255)

CCACAGACCGCCGTTGAATGGGCGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAATGCTGCTGGG  >  NC_000913/580655‑580839

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`