BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	580,771	0	C	T	68.3%	1217.4 / inf	876	G65G (GGC→GGT)	ybcX	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (155/122); new base T (266/331); total (423/453)
Fisher's exact test for biased strand distribution p-value = 1.77e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.78e-11
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 905 total aligned reads displayed.

GATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAATGCTGCTGGGTGTTTATGCCTACTTTATAGAGCA  >  NC_000913/580679‑580863

  tGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTCCAGCGGGCCATCATGAATGCGATGGGCAg                                                                                            >  2:2492699/1‑93 (MQ=255)

     tAATTACTATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGa                                                                                         >  1:2535818/1‑93 (MQ=255)

      aaTTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGAc                                                                                        <  2:3732761/93‑1 (MQ=255)

      aaTTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGAc                                                                                        >  2:2962801/1‑93 (MQ=255)

      aaTTACTATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGat                                                                                        <  1:5848200/93‑2 (MQ=255)

        ttACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTa                                                                                      >  1:353632/1‑93 (MQ=255)

        ttACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATAATGAATGCGATGGGAAGGGACtc                                                                                      >  2:45015/1‑92 (MQ=255)

        ttACTATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTa                                                                                      >  1:4873766/1‑93 (MQ=255)

         tACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTAc                                                                                     <  1:3957313/93‑1 (MQ=255)

          aCTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACa                                                                                    >  2:2336937/1‑93 (MQ=255)

           cTATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACAt                                                                                   <  2:4768786/93‑1 (MQ=255)

            tATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTAAATc                                                                                  >  1:1204035/1‑93 (MQ=255)

            tATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACAta                                                                                  <  2:1963484/93‑2 (MQ=255)

            tATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACAta                                                                                  <  1:1500911/93‑2 (MQ=255)

             aTCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATcc                                                                                 <  2:6124423/93‑1 (MQ=255)

             aTCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACAtac                                                                                 <  1:3261777/93‑3 (MQ=255)

               ctcCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACgg                                                                               >  2:1901288/1‑92 (MQ=255)

               ctcCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGt                                                                               >  2:2803929/1‑93 (MQ=255)

               ctcCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGt                                                                               <  2:3988105/93‑1 (MQ=255)

                tcCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTg                                                                              >  1:1661632/1‑93 (MQ=255)

                tcCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTg                                                                              >  1:4202947/1‑93 (MQ=255)

                tcCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTg                                                                              >  1:3994923/1‑93 (MQ=255)

                 ccccAAAGAGTCGGCCTACTAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGa                                                                             <  2:1344615/93‑1 (MQ=255)

                 ccccAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGa                                                                             <  2:5373486/93‑1 (MQ=255)

                 ccccAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGa                                                                             <  1:725818/93‑1 (MQ=255)

                 ccccAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGa                                                                             <  2:1460663/93‑1 (MQ=255)

                  cccaaaGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAg                                                                            <  1:4113895/90‑1 (MQ=255)

                    caaaGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGt                                                                          >  1:2873804/2‑93 (MQ=255)

                      aaGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGtca                                                                        <  2:5285230/93‑3 (MQ=255)

                      aaGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGtca                                                                        >  2:2173893/1‑91 (MQ=255)

                      aaGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGtca                                                                        >  1:4597695/1‑91 (MQ=255)

                      aaGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGGAAAGATTACATACGTGAggcca                                                                        >  1:1566345/1‑90 (MQ=255)

                      aaGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGa                                                                        >  2:1785780/1‑93 (MQ=255)

                        gAATCCGCATACCAGGAAGGGCGCTGGGAAACATTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAAt                                                                      <  2:2624456/93‑1 (MQ=255)

                         aaTCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAAtg                                                                     <  1:4977268/93‑1 (MQ=255)

                            ccGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATgtgg                                                                  <  1:30611/93‑1 (MQ=255)

                               cATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGa                                                               >  2:4669550/1‑93 (MQ=255)

                                 tACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAg                                                             <  1:2418539/93‑1 (MQ=255)

                                 tACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAg                                                             >  2:5216231/1‑93 (MQ=255)

                                   ccAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTc                                                           >  2:3415412/1‑93 (MQ=255)

                                    cAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCt                                                          >  1:2051276/1‑93 (MQ=255)

                                    cAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCt                                                          >  2:3065013/1‑93 (MQ=255)

                                     aGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTg                                                         >  1:5683718/1‑93 (MQ=255)

                                      ggAAGGGCGCTGGGAAACGTTGCGGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGc                                                        <  2:4195661/93‑1 (MQ=255)

                                      ggAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGCTGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGc                                                        >  2:1187837/1‑93 (MQ=255)

                                      ggAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGc                                                        >  1:3755142/1‑93 (MQ=255)

                                       gAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGcc                                                       >  2:5670098/1‑93 (MQ=255)

                                       gAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGcc                                                       <  1:929888/93‑1 (MQ=255)

                                       gAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGcc                                                       <  2:5913163/93‑1 (MQ=255)

                                        aaGGGCGCTGGGTAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGccc                                                      <  1:5479056/93‑1 (MQ=255)

                                          gggCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCgt                                                    <  2:3914320/93‑1 (MQ=255)

                                          gggCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCgt                                                    >  2:4891833/1‑93 (MQ=255)

                                           ggCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCgtg                                                   >  1:6038480/1‑93 (MQ=255)

                                            gcgcTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCgtgt                                                  <  2:1620366/93‑1 (MQ=255)

                                            gcgcTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCgtgt                                                  <  2:915693/93‑1 (MQ=255)

                                             cgcTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTc                                                 <  1:4258949/93‑1 (MQ=255)

                                              gcTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCgtgttg                                                <  2:597847/93‑3 (MQ=255)

                                              gcTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCg                                                <  2:5031466/93‑1 (MQ=255)

                                               cTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTgg                                               >  1:1384964/1‑93 (MQ=255)

                                                tGGGAACCGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTggc                                              <  2:4323062/93‑2 (MQ=255)

                                                tGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTggc                                              <  1:1081075/93‑2 (MQ=255)

                                                tGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTggc                                              >  1:4423866/1‑92 (MQ=255)

                                                tGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTggc                                              >  1:4500939/1‑92 (MQ=255)

                                                 gggAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTcagct                                             >  1:5187925/1‑89 (MQ=255)

                                                   gAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTAt                                           <  1:5785058/93‑1 (MQ=255)

                                                   gAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTAt                                           >  1:2721648/1‑93 (MQ=255)

                                                        gttGCCGTTTCAACGCGCGATCTTGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCaaa                                      <  1:2309651/91‑1 (MQ=255)

                                                        gttGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCaaa                                      <  2:3127661/91‑1 (MQ=255)

                                                        acTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTTTTccca                                      >  2:4414186/1‑91 (MQ=255)

                                                          tGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAaaaa                                    <  2:1046537/93‑1 (MQ=255)

                                                          tGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCaaaa                                    >  1:1994607/1‑93 (MQ=255)

                                                          tGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCaaaa                                    >  2:3241861/1‑93 (MQ=255)

                                                           gCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCgt                                                    >  1:2202891/1‑76 (MQ=255)

                                                              gtttCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAAtgtt                                >  2:3828195/2‑91 (MQ=255)

                                                              cTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAAtgct                                >  2:5818240/1‑93 (MQ=255)

                                                               tttCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAAtgctg                               >  1:673057/1‑93 (MQ=255)

                                                                ttCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAAtgttgc                              <  2:3530879/93‑1 (MQ=255)

                                                                ttCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAAtgttgc                              <  2:744819/93‑1 (MQ=255)

                                                                  cAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAATGctgctg                            <  1:5937915/93‑1 (MQ=255)

                                                                        gcgatcatGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGtt                      <  1:825418/90‑1 (MQ=255)

                                                                          gatcatGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGTTTa                    <  1:5375347/92‑1 (MQ=255)

                                                                          gatcatGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGTTTa                    <  1:2637157/92‑1 (MQ=255)

                                                                          catcatGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAATGCTGCTGGGTGTTTa                    <  2:786821/93‑1 (MQ=255)

                                                                           atcatGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGTTTAt                   >  1:1842305/1‑93 (MQ=255)

                                                                           atcatGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGTTTAt                   >  2:5120888/1‑93 (MQ=255)

                                                                           atcatGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAATGCTGCTGGGTGTTTAt                   <  1:3860009/93‑1 (MQ=255)

                                                                            tcatGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGTTTATg                  >  1:4730852/1‑93 (MQ=255)

                                                                            tcatGAATGCGATGGGCAGCGACTACATCCGTGAGGGGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAATGCTGCTGGGTGTTTAtc                  >  2:1679769/1‑92 (MQ=255)

                                                                             catGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGTTTATGc                 <  1:3329228/93‑1 (MQ=255)

                                                                             catGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGATGCTGGGTGTTTATGc                 >  2:5493171/1‑93 (MQ=255)

                                                                              atGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGTTTATGcg                <  2:4075621/93‑2 (MQ=255)

                                                                              atGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGTTTATGcg                <  1:276934/93‑2 (MQ=255)

                                                                                 aaTGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGTTTATGCGTat             <  2:2703552/93‑2 (MQ=255)

                                                                                 aaTGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAATGCTGCTGGGTGTTTATGCCTAc             >  1:3170759/1‑93 (MQ=255)

                                                                                  aTGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGTTTATGCGTatt            <  1:5060412/93‑3 (MQ=255)

                                                                                  aTGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAATGCTGCTGGGTGTTTATGCCTACt            <  2:5577478/93‑1 (MQ=255)

                                                                                   tGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAATGCTGCTGGGTGTTTATGCCTACtt           <  2:3617428/93‑1 (MQ=255)

                                                                                      gATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAATGCTGCTGGGTGTTTATGCCTACTTtat        >  2:1839642/1‑93 (MQ=255)

                                                                                         gggCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAATGCTGCTGGGTGTTTATGCCTACTTTATaga     >  1:523772/1‑93 (MQ=255)

                                                                                          ggCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAATGCTGCTGGGTGTTTATGCCTACTTTATagag    <  1:2951307/93‑1 (MQ=255)

GATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAATGCTGCTGGGTGTTTATGCCTACTTTATAGAGCA  >  NC_000913/580679‑580863

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`