BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	580,777	0	C	T	68.1%	1309.7 / inf	878	D67D (GAC→GAT)	ybcX	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (152/128); new base T (267/330); total (419/459)
Fisher's exact test for biased strand distribution p-value = 9.05e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.35e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 904 total aligned reads displayed.

AATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAATGCTGCTGGGTGTTTATGCCTACTTTATAGAGCATAAGCA  >  NC_000913/580685‑580869

 aTTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACt                                                                                             <  1:3262100/93‑1 (MQ=255)

  ttACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATAATGAATGCGATGGGAAGGGACtc                                                                                            >  2:45015/1‑92 (MQ=255)

   tACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTAc                                                                                           <  1:3957313/93‑1 (MQ=255)

      tATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTAAATc                                                                                        >  1:1204035/1‑93 (MQ=255)

      tATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACAta                                                                                        <  2:3953757/93‑2 (MQ=255)

      tATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACAta                                                                                        >  1:4931602/1‑92 (MQ=255)

      tATCTCCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACAta                                                                                        <  1:1500911/93‑2 (MQ=255)

        tctcCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACg                                                                                      <  2:5840806/93‑1 (MQ=255)

         ctcCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGt                                                                                     <  1:5834339/93‑1 (MQ=255)

          tcCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTg                                                                                    >  1:4202947/1‑93 (MQ=255)

          tcCCCAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTg                                                                                    >  1:3994923/1‑93 (MQ=255)

           ccccAAAGAGTCGGCCTACTAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGa                                                                                   <  2:1344615/93‑1 (MQ=255)

           ccccAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGa                                                                                   <  2:1460663/93‑1 (MQ=255)

           ccccAAAGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGa                                                                                   <  2:1857471/93‑1 (MQ=255)

            cccaaaGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAg                                                                                  <  1:4113895/90‑1 (MQ=255)

              caaaGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGt                                                                                <  1:2767738/92‑1 (MQ=255)

               aaaGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGtc                                                                               <  2:5027812/93‑2 (MQ=255)

               aaaGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGtc                                                                               <  2:2202532/93‑2 (MQ=255)

                aaGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGtca                                                                              <  2:3756206/93‑3 (MQ=255)

                aaGAGTCGGCCTACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGGAAAGATTACATACGTGAggcca                                                                              >  1:1566345/1‑90 (MQ=255)

                aaGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGa                                                                              >  2:1785780/1‑93 (MQ=255)

                aaGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGa                                                                              >  1:2218181/1‑93 (MQ=255)

                      ccGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATgtgg                                                                        <  1:30611/93‑1 (MQ=255)

                         cATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGa                                                                     >  2:4669552/1‑93 (MQ=255)

                          aTACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGaa                                                                    <  2:4380265/93‑1 (MQ=255)

                           tACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAg                                                                   <  1:2418539/93‑1 (MQ=255)

                           tACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAg                                                                   >  2:2712256/1‑93 (MQ=255)

                           tACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAg                                                                   >  1:4498431/1‑93 (MQ=255)

                           tACCAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAg                                                                   >  2:307677/1‑93 (MQ=255)

                            aCCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGt                                                                  <  2:265058/93‑1 (MQ=255)

                            aCCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGt                                                                  >  1:5015367/1‑93 (MQ=255)

                             ccAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTc                                                                 <  1:2870047/93‑1 (MQ=255)

                              cAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCt                                                                >  1:5925440/1‑93 (MQ=255)

                              cAGGAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCt                                                                >  1:2051276/1‑93 (MQ=255)

                                ggAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGCTGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGc                                                              >  2:1187837/1‑93 (MQ=255)

                                ggAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGc                                                              >  1:616920/1‑93 (MQ=255)

                                 gAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGcc                                                             >  2:6131997/1‑93 (MQ=255)

                                 gAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGcc                                                             >  2:2349817/1‑93 (MQ=255)

                                 gAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGcc                                                             >  1:5624642/1‑93 (MQ=255)

                                 gAAGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGcc                                                             >  2:2014533/1‑93 (MQ=255)

                                 gAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGcc                                                             >  2:2510959/1‑93 (MQ=255)

                                  aaGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGGGGTGAAGTCGGccc                                                            >  2:4769323/1‑93 (MQ=255)

                                   aGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCg                                                           <  2:3222390/93‑1 (MQ=255)

                                   aGGGCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCg                                                           >  1:5309343/1‑93 (MQ=255)

                                    gggCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCgt                                                          >  2:5736370/1‑93 (MQ=255)

                                    gggCGCTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCgt                                                          <  2:5199253/93‑1 (MQ=255)

                                    gggCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCgt                                                          >  2:4891833/1‑93 (MQ=255)

                                      gcgcTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCgtgt                                                        >  2:190924/1‑93 (MQ=255)

                                      gcgcTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCgtgt                                                        >  2:1688276/1‑93 (MQ=255)

                                       ggcTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTc                                                       <  1:2719441/92‑1 (MQ=255)

                                       cgcTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCgtgtt                                                       >  2:5616424/1‑92 (MQ=255)

                                       cgcTGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCgtgtt                                                       <  2:5267187/93‑2 (MQ=255)

                                       cgcTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTc                                                       <  1:4258949/93‑1 (MQ=255)

                                         cTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCgg                                                     <  1:4705273/93‑1 (MQ=255)

                                          tGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTggc                                                    >  1:4423866/1‑92 (MQ=255)

                                          tGGGAAACGTTGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTggc                                                    <  1:1081075/93‑2 (MQ=255)

                                            ggAAACACTGCCCTTGCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTa                                                  <  2:535109/93‑1 (MQ=255)

                                                acacTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTcc                                              <  1:3190365/93‑1 (MQ=255)

                                                  gttGCCGTTTCAACGCGCGATCTTGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCaaa                                            <  1:2309651/91‑1 (MQ=255)

                                                   ttGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCaaaa                                           <  2:2808242/92‑1 (MQ=255)

                                                    tGCCGTTTCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAaaaa                                          <  2:1046537/93‑1 (MQ=255)

                                                    tGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCaaaa                                          <  2:5434929/93‑1 (MQ=255)

                                                    tGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCaaaa                                          >  1:1994607/1‑93 (MQ=255)

                                                     gCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAAt                                         >  1:722875/1‑93 (MQ=255)

                                                       cgtttCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAAtgt                                       <  1:3564029/91‑2 (MQ=255)

                                                        gtttCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAAtgtt                                      <  2:781710/92‑3 (MQ=255)

                                                         tttCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTGAAGTCTGCCCGTGTTGGCTATTCAAAAAtgttg                                     >  2:5935055/1‑93 (MQ=255)

                                                         tttCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGCCAACGTTGTTAAGCCTGCCCGTGTTGGCTATTCAAAAAtgttg                                     >  1:5225574/1‑93 (MQ=255)

                                                          ttCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAAtgttgc                                    <  1:3855858/93‑1 (MQ=255)

                                                          ttCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAAtgttgc                                    <  2:744819/93‑1 (MQ=255)

                                                          ttCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAAtgttgc                                    <  2:1619890/93‑1 (MQ=255)

                                                           tCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATgttgct                                   <  1:918292/93‑1 (MQ=255)

                                                           tCAACGCGCGATCATGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATgttgct                                   <  1:1710890/93‑1 (MQ=255)

                                                             aGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAATGCTGCTgg                                 >  2:3671271/1‑93 (MQ=255)

                                                                  gcgatcatGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGtt                            >  1:4855506/4‑93 (MQ=255)

                                                                    gatcatGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGTTTa                          <  1:5142237/92‑1 (MQ=255)

                                                                    gatcatGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGTTTa                          <  2:4071916/92‑1 (MQ=255)

                                                                    gatcatGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGTTTa                          >  1:5751832/2‑93 (MQ=255)

                                                                    gatcatGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTAGTCAAACATGTTGCTGGGTGTTTa                          >  1:3355847/2‑93 (MQ=255)

                                                                     atcatGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAATAATGTTGCTGGGTGTTTAt                         >  2:5985516/1‑93 (MQ=255)

                                                                     atcatGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGTTTAt                         >  1:5429285/1‑93 (MQ=255)

                                                                     atcatGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGTTTAt                         <  1:791520/93‑1 (MQ=255)

                                                                     atcatGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAATGCTGCTGGGTGTTTAt                         <  2:3490584/93‑1 (MQ=255)

                                                                        atGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAATGCTGCTGGGTGTTTATGcc                      <  1:4594017/93‑1 (MQ=255)

                                                                         tGAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGTTTATGcgt                     >  2:4151598/1‑91 (MQ=255)

                                                                          gAATGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGTTTATGCGTa                    <  1:1845718/93‑1 (MQ=255)

                                                                           aaTGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGTTTATGCGTat                   <  2:3580960/93‑2 (MQ=255)

                                                                             tGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGTTTATGCGTAttt                 >  2:3334772/1‑93 (MQ=255)

                                                                             tGCGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGTTTATGCGTAttt                 >  2:899533/1‑93 (MQ=255)

                                                                               cGATGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGTTTATGCGTATTTta               >  1:2636891/1‑93 (MQ=255)

                                                                                 aTGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGTTTATGCGTCTTTtatt             >  2:3854735/1‑92 (MQ=255)

                                                                                 aTGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGTTTATGCGTATTTtatt             >  2:4276658/1‑92 (MQ=255)

                                                                                 aTGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGTTTATGCGTATTTtatt             <  2:5537890/93‑2 (MQ=255)

                                                                                 aTGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGTTTATGCGTATTTtatt             >  2:2981832/1‑92 (MQ=255)

                                                                                 aTGGGTAACGATTACATACGTGAGCTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATCCAAAAATGTTGCTGGGTGTTTATGCGTATTTtatt             <  1:6010989/93‑2 (MQ=255)

                                                                                  tGGGTAACGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGTTTATGCGTATTTtattc            <  1:3737322/93‑3 (MQ=255)

                                                                                    ggCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAATGCTGCTGGGTGTTTATGCCTACTTTATagag          <  1:2951307/93‑1 (MQ=255)

                                                                                        gCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAATGCTGCTGGGTGTTTATGCCTACTTTATAGAGCATa      >  1:2545486/1‑93 (MQ=255)

                                                                                         cGATTACATACGTGAGGTCAACGTTGTTAAGTCTGCCCGTGTTGGCTATTCAAAAATGTTGCTGGGTGTTTATGCGTATTTTATTCAGCacca     >  2:5114471/1‑90 (MQ=255)

                                                                                          gACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAATGCTGCTGGGTGTTTATGCCTACTTTATAGAGCATAag    <  1:1375658/93‑1 (MQ=255)

AATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAATGCTGCTGGGTGTTTATGCCTACTTTATAGAGCATAAGCA  >  NC_000913/580685‑580869

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`