BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	78,217	A→G	E199E (GAA→GAG)	yabM →	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	78,217	0	A	G	100.0%	802.5 / NA	220	E199E (GAA→GAG)	yabM	putative transport protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (101/119); total (101/119)

Only 100 of 233 total aligned reads displayed.

TTTACGGTGATGTTTTCGATTGCCGCCGGGATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAACTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCGCCTCGACGTTAATGTGGAC  >  NC_000913/78128‑78306

tttACGGTGATGTTTTCGATTGCCGCCGGGATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTg                                                                                        >  2:6021069/1‑93 (MQ=255)

tttACGGTGATGTTTTCGATTGCCGCCGGGATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTg                                                                                        >  2:1104839/1‑93 (MQ=255)

  tACGGTGATGTTTTCGATTGCCGCCGGGATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGcc                                                                                      <  1:2033594/93‑1 (MQ=255)

   aCGGTGATGTTTTCGATTGCCGCCGGGATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCg                                                                                     <  1:1020747/93‑1 (MQ=255)

    cGGTGATGTTTTCGATTGCCGCCGGGATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGt                                                                                    <  1:5959363/93‑1 (MQ=255)

       tGATGTTTTCGATTGCCGCCGGGATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCgg                                                                                 <  2:2922905/93‑1 (MQ=255)

        gATGTTTTCGATTGCCGCCGGGATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGa                                                                                >  2:794552/1‑93 (MQ=255)

          tGTTTTCGATTGCCGCCGGGATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGaaa                                                                              >  2:4380953/1‑93 (MQ=255)

            ttttCGATTGCCGCCGGGATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAAt                                                                            >  2:5625042/1‑93 (MQ=255)

             tttCGATTGCCGCCGGGATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATg                                                                           >  1:4821275/1‑93 (MQ=255)

               tCGATTGCCGCCGGGATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCt                                                                         <  2:4215894/93‑1 (MQ=255)

               tCGATTGCCGCCGGGATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGGCGGAAAATGCt                                                                         >  1:5473714/1‑93 (MQ=255)

                  gttGCCGCCGGGATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTa                                                                      <  2:4276804/92‑1 (MQ=255)

                  aTTGCCGCCGGGATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTa                                                                      >  2:2475841/1‑93 (MQ=255)

                  aTTGCCGCCGGGATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTa                                                                      >  1:3851249/1‑93 (MQ=255)

                   ttGCCGCCGGGATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTAt                                                                     <  1:2089250/93‑1 (MQ=255)

                   ttGCCGCCGGGATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTAt                                                                     >  2:5007158/1‑93 (MQ=255)

                    tGCCGCCGGGATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATc                                                                    >  2:4456634/1‑93 (MQ=255)

                    tGCCGCCGGGATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATc                                                                    <  1:3304797/93‑1 (MQ=255)

                      ccgccgGGATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCaa                                                                  <  1:3751893/93‑1 (MQ=255)

                        gccgGGATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATg                                                                >  1:5061026/1‑93 (MQ=255)

                        cccgGGATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATg                                                                <  1:5904553/92‑1 (MQ=255)

                        cccgGGATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATg                                                                <  2:910300/92‑1 (MQ=255)

                           gggATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTATAGCTGCCGTCGGAAAATGCTTTATCAATGCaa                                                             <  1:1240511/93‑1 (MQ=255)

                           gggATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCaa                                                             >  1:4406578/1‑93 (MQ=255)

                           gggATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCaa                                                             <  2:1636396/93‑1 (MQ=255)

                            ggATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAg                                                            <  1:5762462/93‑1 (MQ=255)

                            ggATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAg                                                            <  2:2799060/93‑1 (MQ=255)

                            ggATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAATTGTCGTCGGAAAAGGCTTTATCAATGCacg                                                            >  1:5567927/1‑91 (MQ=255)

                             gATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAgg                                                           >  1:1874734/1‑93 (MQ=255)

                               tatTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGtg                                                         >  1:647527/1‑93 (MQ=255)

                               tatTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGtg                                                         >  2:2449002/1‑93 (MQ=255)

                                  tCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGtggct                                                      <  2:4866414/93‑1 (MQ=255)

                                  tCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGtggct                                                      <  1:5537212/93‑1 (MQ=255)

                                   cacaCTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGttgctg                                                     >  1:2426283/1‑93 (MQ=255)

                                   cacaCTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGtggctg                                                     <  2:2280264/93‑1 (MQ=255)

                                   cacaCTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGtggctg                                                     <  1:2293326/93‑1 (MQ=255)

                                   cacaCTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTAGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGtggctg                                                     <  1:5955175/93‑1 (MQ=255)

                                    acacTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGtggctgg                                                    <  2:2571917/93‑1 (MQ=255)

                                    acacTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGtggctgg                                                    <  2:3232042/93‑1 (MQ=255)

                                     cacTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGtggctggc                                                   <  1:394593/93‑1 (MQ=255)

                                      acTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCa                                                  >  2:5168960/1‑93 (MQ=255)

                                      acTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCa                                                  <  2:1270680/93‑1 (MQ=255)

                                       cTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAg                                                 <  2:5931867/93‑1 (MQ=255)

                                        tCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAgg                                                >  1:3226182/1‑93 (MQ=255)

                                         cAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGa                                               <  1:4273650/93‑1 (MQ=255)

                                          aGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGAt                                              <  1:5256530/93‑1 (MQ=255)

                                          aGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGAt                                              <  2:2101543/93‑1 (MQ=255)

                                          aGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGAt                                              <  2:559368/93‑1 (MQ=255)

                                           gTCTGTTATTGATTGCATTTATGCTTCCGTCTGTGGCGGGGGTAGAGCTGCCGTCGGAAAATCCTTTATCAATGCAAGGTGGCTGGCAGGaga                                             <  1:5297263/93‑3 (MQ=255)

                                           gTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATa                                             <  2:5398066/93‑1 (MQ=255)

                                           gTCTGGTATTGATTGCATTGATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATa                                             <  2:1090318/93‑1 (MQ=255)

                                            tCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAg                                            >  2:1886562/1‑93 (MQ=255)

                                             cTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGt                                           <  1:3844136/93‑1 (MQ=255)

                                              tGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTa                                          <  2:5104790/93‑1 (MQ=255)

                                               ggTATTGAGTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATGAATGCAAGGTGGCTGGCAGGATAGTaa                                         <  1:3682628/93‑1 (MQ=255)

                                                gTATTGATTTCTTTTATGCTTGCGTCTGCGGCGCGGGTAGAGCTGCTTGCGTAAAATGCTTTAGCAATGCAAGGTGGCTGGCAGGATAGTAAc                                        <  1:911722/93‑1 (MQ=255)

                                                 tATTGATTGCATTTATGCTTCCGTCTGTGGCTCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACg                                       <  1:4903876/93‑1 (MQ=255)

                                                  attgattgCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGt                                      >  1:1793127/1‑93 (MQ=255)

                                                     gattgCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACg                                   <  2:583716/93‑1 (MQ=255)

                                                       ttgCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGa                                 >  2:6133996/1‑93 (MQ=255)

                                                       ttgCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGa                                 <  1:3562417/93‑1 (MQ=255)

                                                       ttgCATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGa                                 >  1:1579165/1‑93 (MQ=255)

                                                         tcATTTATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATg                               <  2:4301872/92‑1 (MQ=255)

                                                            tttATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAACTGCTTTATCAATGCAAGGGGGCTGGCAGGATAGTACAGTACGCATGttt                            >  2:1498128/1‑92 (MQ=255)

                                                            tttATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTa                            <  2:3880610/93‑1 (MQ=255)

                                                            tttATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTa                            <  2:52674/93‑1 (MQ=255)

                                                             ttATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTAt                           >  2:2159079/1‑93 (MQ=255)

                                                             ttATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTAt                           >  1:4209381/1‑93 (MQ=255)

                                                              tATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTAtt                          >  2:2767065/1‑93 (MQ=255)

                                                              tATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTAtt                          <  1:4069018/93‑1 (MQ=255)

                                                              tATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTAtt                          >  1:4603440/1‑93 (MQ=255)

                                                              tATGCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTAtt                          <  2:2401176/93‑1 (MQ=255)

                                                                 tcTTCCGTCTGTGGCGCGGGTAGAGCTGCTGTCGGAAAATGCTTTATAAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGt                       <  2:370979/92‑1 (MQ=255)

                                                                 gCTTCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGt                       <  2:3157654/93‑1 (MQ=255)

                                                                   ttCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGttg                     >  1:1636387/1‑91 (MQ=255)

                                                                   ttCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCg                     >  2:841940/1‑93 (MQ=255)

                                                                   ttCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCg                     >  1:802693/1‑93 (MQ=255)

                                                                    tCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCGc                    >  2:1953726/1‑93 (MQ=255)

                                                                    tCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCGc                    >  1:4826133/1‑93 (MQ=255)

                                                                    tCCGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCGc                    <  1:5799718/93‑1 (MQ=255)

                                                                     ccGTCTGTGGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCGcc                   <  1:2928673/93‑1 (MQ=255)

                                                                          tgtgGCGCGGGTAGAGCTTCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCGCCTCGAc              <  1:4726206/93‑1 (MQ=255)

                                                                          tgtgGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCGCCTCGAc              <  1:1037175/93‑1 (MQ=255)

                                                                          tgtgGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCGCCTCGAc              <  1:1145909/93‑1 (MQ=255)

                                                                          tgtgGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCGCCTCGAc              >  1:2794032/1‑93 (MQ=255)

                                                                          tgtgGCGCGGGTAGAGCTGCCGTCGGAAAATACTTTATCAAGGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCGCCTCGAc              <  2:4050265/93‑1 (MQ=255)

                                                                           gtgGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCGCCTCGACg             >  2:377468/1‑93 (MQ=255)

                                                                           gtgGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCGCCTCGACg             >  1:2654860/1‑93 (MQ=255)

                                                                            tgGCGCGGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCGCCTCGACGt            <  1:4106563/93‑1 (MQ=255)

                                                                               cgcgGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCGCCTCGACGTTaa         <  1:141170/93‑1 (MQ=255)

                                                                               cgcgGGTAGAGCTGCCGCCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCGCCTCGACGTTaa         >  1:3419053/1‑93 (MQ=255)

                                                                                 cgGGTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCGCCTCGACGTTAAtg       <  1:2975052/93‑1 (MQ=255)

                                                                                  gggTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCGCCTCGACGTTAAtgt      <  1:4564081/93‑1 (MQ=255)

                                                                                  gggTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCGCCTCGACGTTAAtgt      <  2:4111141/93‑1 (MQ=255)

                                                                                   ggTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCGCCTCGACGTTAAtgtg     >  2:4144099/1‑93 (MQ=255)

                                                                                    gTAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCGCCTCGACGTTAATGTgg    >  2:4571076/1‑93 (MQ=255)

                                                                                     tAGAGCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCGCCTCGACGTTAATGTGGa   <  1:5394310/93‑1 (MQ=255)

                                                                                      agagCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCGCCTCGACGTTAATGTGGAc  <  2:1155466/93‑1 (MQ=255)

                                                                                      agagCTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCGCCTCGACGTTAATGTGGAc  <  2:3609559/93‑1 (MQ=255)

TTTACGGTGATGTTTTCGATTGCCGCCGGGATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAACTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCGCCTCGACGTTAATGTGGAC  >  NC_000913/78128‑78306

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`