Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,764,178 G→A L80L (CTG→CTA yfjN → putative cell division protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,764,1780GA99.0% 739.4 / ‑3.3 198L80L (CTG→CTAyfjNputative cell division protein
Reads supporting (aligned to +/- strand):  ref base G (1/1);  new base A (96/100);  total (97/101)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01

Only 100 of 201 total aligned reads displayed.

CAGGGGTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAGAGAC  >  NC_000913/2764090‑2764267
                                                                                        |                                                                                         
cagGGGTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGcc                                                                                       >  2:3674451/1‑93 (MQ=255)
   gggTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAag                                                                                    >  1:5256987/1‑93 (MQ=255)
   gggTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAag                                                                                    >  1:1496966/1‑93 (MQ=255)
   gggTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAag                                                                                    >  2:3493088/1‑93 (MQ=255)
    ggTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAaga                                                                                   <  1:3497731/93‑1 (MQ=255)
     gTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAagag                                                                                  <  1:1529056/93‑1 (MQ=255)
      ttAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGt                                                                                 >  2:2879724/1‑93 (MQ=255)
      ttAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGt                                                                                 <  2:2009394/93‑1 (MQ=255)
      ttAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGt                                                                                 >  2:1414087/1‑93 (MQ=255)
       tAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGtt                                                                                <  1:4154761/93‑1 (MQ=255)
        aaCTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTa                                                                               <  2:897245/93‑1 (MQ=255)
         aCTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAg                                                                              <  1:5640158/93‑1 (MQ=255)
         aCTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAg                                                                              <  2:5047972/93‑1 (MQ=255)
          cTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGc                                                                             <  2:2691060/93‑1 (MQ=255)
          cTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGc                                                                             <  1:1624970/93‑1 (MQ=255)
           ttGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCg                                                                            <  1:1856785/93‑1 (MQ=255)
            tGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCgg                                                                           <  1:3143147/93‑1 (MQ=255)
            tGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCgg                                                                           >  2:3754270/1‑93 (MQ=255)
            tGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCgg                                                                           >  1:2915760/1‑93 (MQ=255)
             ggCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGa                                                                          >  2:1986864/1‑93 (MQ=255)
               cAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGatc                                                                        >  2:4454339/1‑93 (MQ=255)
                aaCTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGatca                                                                       >  1:5920730/1‑93 (MQ=255)
                 aCTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGatcat                                                                      >  1:4045026/1‑93 (MQ=255)
                 aCTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGatcat                                                                      <  1:2259645/93‑1 (MQ=255)
                 aCTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGatcat                                                                      >  2:3354991/1‑93 (MQ=255)
                  cTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGatcatc                                                                     <  2:5843950/93‑1 (MQ=255)
                   tgtgGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCt                                                                    <  1:1040471/93‑1 (MQ=255)
                    gtgGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCtt                                                                   >  2:469196/1‑93 (MQ=255)
                    gtgGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCtt                                                                   >  1:1170190/1‑93 (MQ=255)
                    gtgGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCtt                                                                   <  1:2209355/93‑1 (MQ=255)
                     tgGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCttt                                                                  >  1:231889/1‑93 (MQ=255)
                      ggACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGGCAAGAGTTAGCGGATCATCtttt                                                                 <  2:1802802/93‑1 (MQ=255)
                      ggACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCtttt                                                                 <  2:4842041/93‑1 (MQ=255)
                      ggACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCtttt                                                                 >  2:5642905/1‑93 (MQ=255)
                         cATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGa                                                              <  2:1046553/93‑1 (MQ=255)
                         cATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGa                                                              >  2:5248842/1‑93 (MQ=255)
                           ttttttATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGaaa                                                            <  2:1913687/93‑1 (MQ=255)
                            ttttgATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAAc                                                           <  2:588402/93‑1 (MQ=255)
                              tttATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCa                                                         <  1:3842256/93‑1 (MQ=255)
                              tttATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCa                                                         <  1:171407/93‑1 (MQ=255)
                               ttATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCAt                                                        >  2:4093801/1‑93 (MQ=255)
                                 ataACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCa                                                      >  2:1473945/1‑93 (MQ=255)
                                 ataACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCa                                                      >  2:6042992/1‑93 (MQ=255)
                                  taACGGGGACGGTTCGACTGCAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCaa                                                     <  2:2674763/93‑1 (MQ=255)
                                  taACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCaa                                                     <  1:3391455/93‑1 (MQ=255)
                                   aaCGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAAt                                                    <  1:4873323/93‑1 (MQ=255)
                                       gggACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCctg                                                >  1:908604/1‑93 (MQ=255)
                                       gggACGGTGCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCGATCctg                                                <  1:207803/93‑1 (MQ=255)
                                         gACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCctgct                                              <  1:4669321/93‑1 (MQ=255)
                                          gcGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCctgctg                                             <  1:4470384/92‑1 (MQ=255)
                                           cGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGa                                            >  1:3565343/1‑93 (MQ=255)
                                            ggTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGaa                                           <  2:1160318/93‑1 (MQ=255)
                                             gTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAAt                                          >  2:3852542/1‑93 (MQ=255)
                                             gTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAAt                                          >  2:5967748/1‑93 (MQ=255)
                                              ttCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAAtt                                         <  1:5590857/93‑1 (MQ=255)
                                               tCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAAttt                                        >  2:2387962/1‑93 (MQ=255)
                                               tCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGCTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAAttt                                        >  1:3987985/1‑93 (MQ=255)
                                                cGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTg                                       >  1:4677539/1‑93 (MQ=255)
                                                cGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTg                                       <  2:4234458/93‑1 (MQ=255)
                                                cGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTg                                       <  1:2574026/93‑1 (MQ=255)
                                                 gACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGa                                      <  2:3126149/93‑1 (MQ=255)
                                                 gACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGa                                      <  1:2426930/93‑1 (MQ=255)
                                                  aCTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAg                                     >  1:5021650/1‑93 (MQ=255)
                                                  aCTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAg                                     >  1:1898554/1‑93 (MQ=255)
                                                   cTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGc                                    >  2:822398/1‑93 (MQ=255)
                                                    taaaaTTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCa                                   <  1:619759/90‑1 (MQ=255)
                                                    tACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGACACCATCAATCCTGCTGAATTTGAGCa                                   >  1:2768104/1‑93 (MQ=255)
                                                    tACAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCa                                   >  2:1701591/1‑93 (MQ=255)
                                                      cAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAgg                                 <  2:2321990/93‑1 (MQ=255)
                                                      cAATTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAgg                                 >  1:1613964/1‑93 (MQ=255)
                                                        aTTCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTa                               >  1:288009/1‑93 (MQ=255)
                                                         ttCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTaa                              >  2:2200192/1‑93 (MQ=255)
                                                          tCAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTaaa                             <  2:5789061/93‑1 (MQ=255)
                                                           cAATATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAat                            >  2:939019/1‑93 (MQ=255)
                                                            aaTATCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAata                           >  1:2511609/1‑93 (MQ=255)
                                                              tatCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATg                         <  2:4343121/93‑1 (MQ=255)
                                                              tatCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATg                         <  1:4245502/93‑1 (MQ=255)
                                                               atCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATgg                        >  1:205470/1‑93 (MQ=255)
                                                               atCTCACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATgg                        <  1:4180490/93‑1 (MQ=255)
                                                                tctcACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGt                       <  2:1423324/93‑1 (MQ=255)
                                                                tctcACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGt                       <  2:4605417/93‑1 (MQ=255)
                                                                 ctcACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTa                      <  1:5006953/93‑1 (MQ=255)
                                                                  tcACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTAc                     <  2:4171771/93‑1 (MQ=255)
                                                                  tcACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTAc                     <  2:5143558/93‑1 (MQ=255)
                                                                   cACTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACt                    <  1:5739845/93‑1 (MQ=255)
                                                                    aCTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTg                   >  1:5391680/1‑93 (MQ=255)
                                                                    aCTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTg                   >  2:3551337/1‑93 (MQ=255)
                                                                     cTGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGGGGATCATCTTTTTGAAAACATAAATCCTGCTGAATTTGGGCAGGTAAATATGGTACTGc                  >  1:2099655/1‑93 (MQ=255)
                                                                      tGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCa                 >  1:5870705/1‑93 (MQ=255)
                                                                      tGGAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCa                 >  2:625824/1‑93 (MQ=255)
                                                                       ggAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCaa                <  2:5418180/93‑1 (MQ=255)
                                                                       ggAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCaa                <  2:5545137/93‑1 (MQ=255)
                                                                       ggAGCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCaa                <  1:5319541/93‑1 (MQ=255)
                                                                          gCCAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGa             <  1:521927/93‑1 (MQ=255)
                                                                            cattCGTTCTCTAGGCCTAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGAtt           >  1:5474277/4‑93 (MQ=255)
                                                                            cAATCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGAtt           >  1:2544479/1‑93 (MQ=255)
                                                                              aTCGTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTg         >  1:3728065/1‑93 (MQ=255)
                                                                                 gTTCTCTAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGCAAATATGGTACTGCAAGGAATTGTag      >  1:1395170/1‑93 (MQ=255)
                                                                                    ctctAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAgaga   <  2:4023020/93‑1 (MQ=255)
                                                                                     tctAGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAGAGAc  >  2:2689367/1‑93 (MQ=255)
                                                                                        |                                                                                         
CAGGGGTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAGAGAC  >  NC_000913/2764090‑2764267

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: