BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,908,853	T→C	G87G (GGA→GGG)	chpA ←	ChpA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,908,853	0	T	C	99.1%	795.7 / ‑4.9	224	G87G (GGA→GGG)	chpA	ChpA
Reads supporting (aligned to +/- strand): ref base T (2/0); new base C (117/105); total (119/105)
Fisher's exact test for biased strand distribution p-value = 5.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 243 total aligned reads displayed.

AGTGAGTTAGTAACACTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCTCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCGAACGGATA  >  NC_000913/2908763‑2908942

  tGAGTTAGTAACACTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGcccctc                                                                                       >  1:1065120/1‑93 (MQ=255)

  tGAGTTAGTAACACTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGcccctc                                                                                       <  1:1807167/93‑1 (MQ=255)

  tGAGTTAGTAACACTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGcccctc                                                                                       >  2:1983885/1‑93 (MQ=255)

    aGTTAGTAACACTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCtt                                                                                     >  2:3420787/1‑93 (MQ=255)

    aGTTAGTAACACTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCtt                                                                                     <  2:740264/93‑1 (MQ=255)

     gTTAGTAACACTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCttc                                                                                    >  2:4205081/1‑92 (MQ=255)

     gTTAGTAACACTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTg                                                                                    >  1:2073387/1‑93 (MQ=255)

       tAGTAACACTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGcc                                                                                  <  1:2814454/93‑1 (MQ=255)

         gTAACACTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCg                                                                                <  1:4833469/93‑1 (MQ=255)

            acacTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCa                                                                             <  1:6104911/93‑1 (MQ=255)

              acTACCCAATCAGTACGTTAATTTTGGCTTTAGTGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAgg                                                                           >  1:5156744/1‑93 (MQ=255)

                tACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCg                                                                         >  2:2460120/1‑93 (MQ=255)

                 aCCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGa                                                                        >  1:2752910/1‑93 (MQ=255)

                 aCCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGa                                                                        <  2:2973251/93‑1 (MQ=255)

                 aCCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGa                                                                        <  2:788921/93‑1 (MQ=255)

                  cccAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGAt                                                                       >  2:879503/1‑93 (MQ=255)

                  cccAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGAt                                                                       >  2:2405091/1‑93 (MQ=255)

                  cccAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGAt                                                                       <  2:5401165/93‑1 (MQ=255)

                  cccAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGAt                                                                       >  2:3487919/1‑93 (MQ=255)

                   ccAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATa                                                                      <  2:1052975/93‑1 (MQ=255)

                   ccAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATa                                                                      >  1:5840128/1‑93 (MQ=255)

                    cAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATAc                                                                     >  1:2169341/1‑93 (MQ=255)

                     aaTCAGTACGTTAATTTTGGCTTTATTGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACt                                                                    <  1:3081014/93‑1 (MQ=255)

                     aaTCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACt                                                                    <  1:2095038/93‑1 (MQ=255)

                      aTCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACtt                                                                   <  2:4841686/93‑1 (MQ=255)

                       tCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACttt                                                                  <  2:565000/93‑1 (MQ=255)

                        cAGTACGTTCATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACtttt                                                                 <  1:5482404/93‑1 (MQ=255)

                        cAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACtttt                                                                 <  2:185126/93‑1 (MQ=255)

                          gTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTa                                                               <  2:3641312/93‑1 (MQ=255)

                          gTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTa                                                               >  2:1491369/1‑93 (MQ=255)

                          gTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTa                                                               >  2:1777399/1‑93 (MQ=255)

                              gTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTg                                                           >  1:4723330/1‑93 (MQ=255)

                               ttAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGa                                                          >  1:3215567/1‑93 (MQ=255)

                               ttAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGa                                                          <  1:2390117/93‑1 (MQ=255)

                                  aTTTTGTCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCa                                                       >  1:3408509/1‑93 (MQ=255)

                                   ttttGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAg                                                      >  1:4246383/1‑93 (MQ=255)

                                     ttGGCTTTAATGAGTTGTAATTCCTCTGGGGCCACTGTTCCTTTCTTCGTTGCCCCTCTTGCTCGCCAGGCGATACTTTTTACCTGATCAGCt                                                    >  1:2969490/1‑93 (MQ=255)

                                     ttGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTACTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCt                                                    >  1:3140439/1‑93 (MQ=255)

                                        gCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAAc                                                 <  1:4968144/93‑1 (MQ=255)

                                        gCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAAc                                                 >  1:5730056/1‑93 (MQ=255)

                                        gCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAAc                                                 <  2:2558542/93‑1 (MQ=255)

                                         cTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACg                                                >  1:5608279/1‑93 (MQ=255)

                                         cTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACg                                                <  2:2134649/93‑1 (MQ=255)

                                         cTTTAATGAGTTGTAATTCCTCTGGGGCAACTGGTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACg                                                >  1:2796127/1‑93 (MQ=255)

                                          tttAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGc                                               >  2:1317248/1‑93 (MQ=255)

                                           ttAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCTCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCt                                              >  1:6014983/1‑93 (MQ=255)

                                           ttAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCt                                              >  2:4396223/1‑93 (MQ=255)

                                            tAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTa                                             <  1:4648283/93‑1 (MQ=255)

                                             aaTGAGTTGTAATTCCCCTCGGGCAACTGTTCCTTTCTCCGTTGCCCCTCTTGCCCGCCAGCCGATACTTTTTACCTGACCAGCTAACGCttc                                            <  1:270417/93‑3 (MQ=255)

                                               tGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGc                                          >  1:3989439/1‑93 (MQ=255)

                                                gAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGcc                                         >  2:3170548/1‑93 (MQ=255)

                                                 aGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCa                                        <  1:627445/93‑1 (MQ=255)

                                                  gTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCAt                                       >  1:1706831/1‑93 (MQ=255)

                                                  gTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCAt                                       >  2:5052086/1‑93 (MQ=255)

                                                  gTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCAGCCAGGCGATACTTTTTAGCTGATCAGCTAACGCTACGCCAt                                       >  1:4490256/1‑93 (MQ=255)

                                                   ttGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTTCCTGATCAGCTAACGCTACGCCATc                                      <  1:4542791/93‑1 (MQ=255)

                                                    tGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCa                                     >  2:2323708/1‑93 (MQ=255)

                                                     gTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCAc                                    <  2:1040247/93‑1 (MQ=255)

                                                      tAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACg                                   >  1:1439240/1‑93 (MQ=255)

                                                       aaTTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGt                                  <  2:3776097/93‑1 (MQ=255)

                                                        aTTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCCGGCGATACTTTTTACCTGATCGGCTATTGCTACGCCATCACGtt                                 >  1:4128854/1‑93 (MQ=255)

                                                        aTTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGtt                                 >  2:818731/1‑93 (MQ=255)

                                                         ttCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTc                                >  2:5641296/1‑93 (MQ=255)

                                                          tCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTcc                               <  1:2841439/93‑1 (MQ=255)

                                                          tCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTcc                               >  1:2355685/1‑93 (MQ=255)

                                                           ccTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCt                              <  2:4948084/93‑1 (MQ=255)

                                                           ccTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCt                              >  2:3250450/1‑93 (MQ=255)

                                                           ccTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCt                              >  1:2039552/1‑93 (MQ=255)

                                                            ctctGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTg                             >  2:5202370/1‑93 (MQ=255)

                                                              ctGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGAc                           <  2:3038500/93‑1 (MQ=255)

                                                               tGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGAcc                          <  1:4355950/93‑1 (MQ=255)

                                                               tGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGAcc                          >  1:5319083/1‑93 (MQ=255)

                                                                ggggCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCg                         <  2:3364155/93‑1 (MQ=255)

                                                                ggggCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCg                         >  2:5175029/1‑93 (MQ=255)

                                                                  ggCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGa                       <  1:602812/93‑1 (MQ=255)

                                                                  ggCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGa                       <  1:4795657/93‑1 (MQ=255)

                                                                   gCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGAt                      <  1:714945/93‑1 (MQ=255)

                                                                    cAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATa                     >  1:5348855/1‑93 (MQ=255)

                                                                     aaCTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATaa                    >  1:1346001/1‑93 (MQ=255)

                                                                        tGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAaac                 <  2:5689736/93‑1 (MQ=255)

                                                                          ttCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAaacaa               >  2:5881372/1‑93 (MQ=255)

                                                                           tCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAaacaac              >  1:5235003/1‑93 (MQ=255)

                                                                           tCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAaacaac              >  1:4697798/1‑93 (MQ=255)

                                                                            ccTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACt             >  2:2812462/1‑93 (MQ=255)

                                                                             cTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACtt            <  2:4058777/93‑1 (MQ=255)

                                                                             cTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACtt            <  2:2628124/93‑1 (MQ=255)

                                                                             cTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACtt            >  2:3112038/1‑93 (MQ=255)

                                                                              tttCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACttg           >  2:639933/1‑92 (MQ=255)

                                                                              tttCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTc           <  1:3582422/93‑1 (MQ=255)

                                                                               ttcttcGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCg          >  2:5485672/1‑93 (MQ=255)

                                                                                 cttcGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCGaa        <  1:1600727/93‑1 (MQ=255)

                                                                                  ttcGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCGAAc       >  1:38674/1‑93 (MQ=255)

                                                                                  ttcGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCGAAc       >  2:1201569/1‑93 (MQ=255)

                                                                                   tcGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCGAACg      <  2:2087249/93‑1 (MQ=255)

                                                                                     gTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCGAACGGa    >  1:3681222/1‑93 (MQ=255)

                                                                                     gTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCGAACGGa    >  1:2479532/1‑93 (MQ=255)

                                                                                     gTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTCCCTGACCGGATAAAACAACTTCGAACGGa    <  1:1180139/93‑1 (MQ=255)

                                                                                      ttGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCGAACGGat   <  1:2650384/93‑1 (MQ=255)

                                                                                      ttGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCGAACGGat   >  1:3330814/1‑93 (MQ=255)

                                                                                      ttGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCGAACGGat   <  2:2483831/93‑1 (MQ=255)

AGTGAGTTAGTAACACTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCTCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCGAACGGATA  >  NC_000913/2908763‑2908942

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`