Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,142,022 A→G V53A (GTG→GCG)  hybB ← putative cytochrome Ni/Fe component of hydrogenase‑2

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,142,0220AG95.5% 558.7 / 9.8 179V53A (GTG→GCG) hybBputative cytochrome Ni/Fe component of hydrogenase‑2
Reads supporting (aligned to +/- strand):  ref base A (5/3);  new base G (74/97);  total (79/100)
Fisher's exact test for biased strand distribution p-value = 3.04e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.18e-01

Only 100 of 203 total aligned reads displayed.

TGCCCACGGTTAAAGACGTATACCGCCCACGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACACGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAGCATACAGATGACGATT  >  NC_000913/3141932‑3142111
                                                                                           |                                                                                         
tGCCCACGGTTAAAGCCGTATCCCGCCCACGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCAcgcg                                                                                         <  1:2044933/93‑1 (MQ=255)
tGCCCACGGTTAAAGACGTATACCGCCCACGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCAcgcg                                                                                         >  1:5684806/1‑93 (MQ=255)
  cccACGGTTAAAGACGTATACCGCCCACGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGcc                                                                                       >  2:2100740/1‑93 (MQ=255)
   ccACGGTTAAAGACGTATACCGCCCACGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGccc                                                                                      >  1:1207898/1‑93 (MQ=255)
   ccACGGTTAAAGACGTATACCGCCCACGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGccc                                                                                      >  2:3239996/1‑93 (MQ=255)
    cACGGTTAAAGACGTATACCGCCCACGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGcccc                                                                                     <  1:992954/93‑1 (MQ=255)
     ccGGTTAAAGACGTATACCGCCCCCGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCa                                                                                    <  2:2161886/92‑1 (MQ=255)
      cGGTTAAAGACGTATACCGCCCCCGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCAc                                                                                   <  2:397932/93‑1 (MQ=255)
      cGGTTAAAGACGTATACCGCCCACGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCAc                                                                                   >  1:1670361/1‑93 (MQ=255)
      cGGTTAAAGACGTATACCGCCCACGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCAc                                                                                   >  1:2460531/1‑93 (MQ=255)
        gTTAAAGACGTATCCCCCCCACGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACgg                                                                                 <  1:10673/93‑1 (MQ=255)
        gTTAAAGACGTATACCGCCCACGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACgg                                                                                 <  1:700670/93‑1 (MQ=255)
        gTTAAAGACGTATACCGCCCACGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACgg                                                                                 >  2:4795466/1‑93 (MQ=255)
        gTTAAAGACGTATACCGCCCACGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACgg                                                                                 <  2:5775260/93‑1 (MQ=255)
           aaaGACGTATACCGCCCACGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGaa                                                                              <  2:1299288/93‑1 (MQ=255)
           aaaGACGTATACCGCCCACGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGaa                                                                              <  1:2893432/93‑1 (MQ=255)
             aGACGTATCCCGCCCACGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAgc                                                                            <  1:223568/93‑1 (MQ=255)
                cGTATACCGCCCACGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAGACGCGATCCACGCGCCCCACGTGAAgccgc                                                                         >  1:5207543/1‑93 (MQ=255)
                cGTATACCGCCCACGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAgccgc                                                                         <  1:256197/93‑1 (MQ=255)
                 gTATACCGCCCACGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACACGCCCCACGGGAAgccgcc                                                                        >  1:5624314/1‑93 (MQ=255)
                  tataCCGCCCACGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGccgccg                                                                       >  1:6085894/1‑93 (MQ=255)
                  tataCCGCCCACGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGccgccg                                                                       >  1:2675198/1‑93 (MQ=255)
                    taCCGCCCACGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGtt                                                                     >  1:3467979/1‑93 (MQ=255)
                       cGCCCACGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAg                                                                  >  1:3044286/1‑93 (MQ=255)
                       cGCCCACGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAg                                                                  >  1:851789/1‑93 (MQ=255)
                        gCCCACGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAgg                                                                 >  1:3743739/1‑93 (MQ=255)
                        cccccCGCCGGCCCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAgg                                                                 <  1:5422334/92‑1 (MQ=255)
                          ccccGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTc                                                               <  2:4345274/90‑1 (MQ=255)
                          ccACGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTc                                                               <  2:3872639/93‑1 (MQ=255)
                            ccGCCAGCCCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCag                                                             <  2:2981420/92‑1 (MQ=255)
                            aCGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCag                                                             >  1:4735420/1‑93 (MQ=255)
                            aCGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACACGCCCCACGGGAAGCCGCCGTTCAGGTCag                                                             >  1:5998420/1‑93 (MQ=255)
                             cGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCaga                                                            >  1:2947657/1‑93 (MQ=255)
                             cGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCaga                                                            <  1:4540610/93‑1 (MQ=255)
                               ccAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAgaga                                                          <  2:753661/93‑1 (MQ=255)
                                cAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGAc                                                         <  2:2133289/93‑1 (MQ=255)
                                cAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGCTCAGAGAc                                                         >  2:790022/1‑93 (MQ=255)
                                    gcCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACagag                                                     <  2:3894031/93‑1 (MQ=255)
                                    gcCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACagag                                                     >  2:4582366/1‑93 (MQ=255)
                                    ccccAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACagag                                                     <  2:5663319/92‑1 (MQ=255)
                                     cccAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGc                                                    >  2:377647/1‑93 (MQ=255)
                                      ccAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGcc                                                   <  1:2603409/93‑1 (MQ=255)
                                      ccAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGcc                                                   <  1:3131774/93‑1 (MQ=255)
                                        aGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGccga                                                 >  2:1538122/1‑91 (MQ=255)
                                         gccgccACAGGCAAAGCCGGGGCCAATCAGCAGGTCAAACGCGATCCACGCCCCCCACGGGAGGCCGCCGTTAGGGTCAGAGACAGGCCCCAg                                                >  2:3709367/1‑93 (MQ=255)
                                           cgccACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGCGCCCAGAc                                              >  1:2819102/1‑93 (MQ=255)
                                           cgccACAGGCAAGCCGGCGGCCAACAGGCGGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGAc                                              <  1:100571/93‑1 (MQ=255)
                                            gccACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGAcc                                             >  1:4287113/1‑93 (MQ=255)
                                            cccACGGGCAAACCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGAcc                                             <  2:1379514/92‑1 (MQ=255)
                                                caGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAac                                         <  1:2318597/93‑1 (MQ=255)
                                                caGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAac                                         >  2:5211530/1‑93 (MQ=255)
                                                caGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAac                                         >  2:3035594/1‑93 (MQ=255)
                                                caGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAac                                         <  2:3383020/93‑1 (MQ=255)
                                                 aGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAaca                                        >  2:5441929/1‑93 (MQ=255)
                                                 aGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAaca                                        >  1:938082/1‑93 (MQ=255)
                                                  ggCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAacac                                       >  2:4141399/1‑93 (MQ=255)
                                                  ggCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAacac                                       >  1:4291876/1‑93 (MQ=255)
                                                     aaaGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAg                                    <  1:2718789/93‑1 (MQ=255)
                                                      aaGCCGGTGCCAATCAGCAGGTCAACCGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGa                                   <  1:1311958/93‑1 (MQ=255)
                                                      aaGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGa                                   <  2:1211518/93‑1 (MQ=255)
                                                       aGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGAc                                  <  1:3937934/93‑1 (MQ=255)
                                                       aGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGAc                                  >  1:4840078/1‑93 (MQ=255)
                                                        gCCGTTGCCAAACAGGATGTCAAACGCGGTCCACGCGCCCCACGGGAAGCCTCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACg                                 <  1:2107744/93‑1 (MQ=255)
                                                        gCCGGTGCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACg                                 >  2:5290404/1‑93 (MQ=255)
                                                               gCCAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTcac                           <  2:4330565/93‑1 (MQ=255)
                                                                 cAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACaa                         <  2:5906646/93‑1 (MQ=255)
                                                                 cAATCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACaa                         >  1:5739425/1‑93 (MQ=255)
                                                                  aaTCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAAt                        <  2:4856883/93‑1 (MQ=255)
                                                                  aaTCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAAt                        >  1:1973767/1‑93 (MQ=255)
                                                                   aTCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATc                       <  2:2641113/93‑1 (MQ=255)
                                                                   aTCAGCAGGTCAAACGCGATCCACACGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGCCAGAGCCCAGACCGAACACCAGACGCTTCACACTc                       >  2:3213081/1‑93 (MQ=255)
                                                                    tCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCa                      >  1:983186/1‑93 (MQ=255)
                                                                    tCAGCAGGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCa                      <  2:3808302/93‑1 (MQ=255)
                                                                        cagGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAg                  <  2:1264511/93‑1 (MQ=255)
                                                                        cagGTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAg                  <  2:644076/93‑1 (MQ=255)
                                                                          ggTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAGCa                <  2:2062705/93‑1 (MQ=255)
                                                                           gTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAGCAt               >  1:3977317/1‑93 (MQ=255)
                                                                           gTCAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAGCAt               <  1:5944973/93‑1 (MQ=255)
                                                                             cAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAGCATAc             >  2:2909967/1‑93 (MQ=255)
                                                                             cAAACGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAGCATAc             <  2:1366583/93‑1 (MQ=255)
                                                                              aaaCGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCCCAATCAGGAGCATACa            >  2:7022/1‑93 (MQ=255)
                                                                              aaaCGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAGCATACa            <  2:4542402/93‑1 (MQ=255)
                                                                              aaaCGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCACGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAGCATACa            <  2:1724417/93‑1 (MQ=255)
                                                                                aCGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAGCATACAGa          >  1:1385978/1‑93 (MQ=255)
                                                                                aCGCGATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAGCATACAGa          <  2:5561053/93‑1 (MQ=255)
                                                                                aCGCGATCCACACGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAGCATACAGa          <  1:3111309/93‑1 (MQ=255)
                                                                                 cgcgATCCGCGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAGCATACAGAt         <  1:2749161/93‑1 (MQ=255)
                                                                                 cgcgATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAGCATACAGAt         <  2:2347394/93‑1 (MQ=255)
                                                                                  gcgATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAGCATACAGATg        <  1:606743/93‑1 (MQ=255)
                                                                                   cgATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAGCATACAGATGa       <  2:5606062/93‑1 (MQ=255)
                                                                                    gATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAGCATACAGATGAc      >  1:3088632/1‑93 (MQ=255)
                                                                                    gATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAGCATACAGATGAc      <  1:5035161/93‑1 (MQ=255)
                                                                                    gATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAGCATACAGATGAc      <  2:4029249/93‑1 (MQ=255)
                                                                                    gATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAGCATACAGATGAc      >  1:1841515/1‑93 (MQ=255)
                                                                                    gATCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAGCATACAGATGAc      <  2:152490/93‑1 (MQ=255)
                                                                                      tCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAGCATACAGATGACGa    >  2:1422728/1‑93 (MQ=255)
                                                                                      tCCACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAGCATACAGATGACGa    >  2:845525/1‑93 (MQ=255)
                                                                                      accACGCGCCCCACGGAAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAGCATACAGATGACGa    <  1:3609974/92‑1 (MQ=255)
                                                                                       ccACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAGCATACAGATGACGAt   <  1:4323174/93‑1 (MQ=255)
                                                                                       ccACGCGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAGCATACAGATGACGAt   <  2:2712001/93‑1 (MQ=255)
                                                                                           |                                                                                         
TGCCCACGGTTAAAGACGTATACCGCCCACGCCAGCGCCCAGCCGCCACAGGCAAAGCCGGTGCCAATCAGCAGGTCAAACGCGATCCACACGCCCCACGGGAAGCCGCCGTTCAGGTCAGAGACAGAGCCCAGACCGAACACCAGACGCTTCACAATCAGGAGCATACAGATGACGATT  >  NC_000913/3141932‑3142111

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: