Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,663,106 A→G L112P (CTA→CCA)  yhiX ← putative ARAC‑type regulatory protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,663,1060AG99.4% 1245.0 / ‑3.4 340L112P (CTA→CCA) yhiXputative ARAC‑type regulatory protein
Reads supporting (aligned to +/- strand):  ref base A (1/1);  new base G (171/167);  total (172/168)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01

Only 100 of 341 total aligned reads displayed.

TTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGT  >  NC_000913/3663016‑3663195
                                                                                          |                                                                                         
ttCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGc                                                                                         <  1:2401369/93‑1 (MQ=255)
 tCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCa                                                                                        >  2:5336685/1‑93 (MQ=255)
  cGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCAt                                                                                       <  1:2770376/93‑1 (MQ=255)
    gTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCAttt                                                                                     <  1:4938474/93‑1 (MQ=255)
    gTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCAttt                                                                                     >  2:6046937/1‑93 (MQ=255)
     ttGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTc                                                                                    <  1:4641234/93‑1 (MQ=255)
     ttGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTc                                                                                    <  1:572329/93‑1 (MQ=255)
      tGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCt                                                                                   <  1:886256/93‑1 (MQ=255)
       gTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTg                                                                                  >  1:1183894/1‑93 (MQ=255)
       gTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTg                                                                                  >  1:721946/1‑93 (MQ=255)
        tAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGc                                                                                 >  2:3605966/1‑93 (MQ=255)
        tAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGc                                                                                 >  2:3070899/1‑93 (MQ=255)
        tAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGc                                                                                 >  2:2841116/1‑93 (MQ=255)
         aaaaCGTTCAGAAGCAGCGTTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCa                                                                                <  1:2454573/93‑1 (MQ=255)
          aaaCGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCAt                                                                               >  2:3811429/1‑93 (MQ=255)
           aaCGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATa                                                                              >  1:1851293/1‑93 (MQ=255)
           aaCGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATa                                                                              <  1:2237878/93‑1 (MQ=255)
            aCGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAg                                                                             <  2:1836222/93‑1 (MQ=255)
               ttCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGa                                                                          <  2:3037300/93‑1 (MQ=255)
                  aGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGa                                                                       <  1:3840193/93‑1 (MQ=255)
                   gAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGAt                                                                      >  2:1430441/1‑93 (MQ=255)
                      gcagcGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCt                                                                   <  1:3042078/93‑1 (MQ=255)
                      gcagcGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCt                                                                   >  2:5655577/1‑93 (MQ=255)
                        agcGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTa                                                                 <  1:3537268/93‑1 (MQ=255)
                         gcGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTAt                                                                >  1:4248345/1‑93 (MQ=255)
                          cGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTAtt                                                               <  2:765974/93‑1 (MQ=255)
                           ggTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTc                                                              <  2:130908/93‑1 (MQ=255)
                           ggTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTc                                                              <  2:5413212/93‑1 (MQ=255)
                            gTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCt                                                             <  2:2045204/93‑1 (MQ=255)
                            gTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCt                                                             >  1:4880036/1‑93 (MQ=255)
                            gTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCt                                                             >  2:1142408/1‑93 (MQ=255)
                            gTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCt                                                             >  1:140555/1‑93 (MQ=255)
                            gTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGACTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCt                                                             >  1:370682/1‑93 (MQ=255)
                              ataAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGc                                                           <  2:2674231/93‑1 (MQ=255)
                                aaaGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGa                                                         <  2:4666074/93‑1 (MQ=255)
                                 aaGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGAt                                                        >  1:2565581/1‑93 (MQ=255)
                                 aaGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGAt                                                        >  1:1033252/1‑93 (MQ=255)
                                  aGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATa                                                       <  1:5663806/93‑1 (MQ=255)
                                   gTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAg                                                      <  2:631305/93‑1 (MQ=255)
                                    tGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGt                                                     <  1:3347232/93‑1 (MQ=255)
                                    tGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGt                                                     <  2:5532512/93‑1 (MQ=255)
                                    tGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGt                                                     >  1:4482194/1‑93 (MQ=255)
                                     gCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGtt                                                    <  1:3868207/93‑1 (MQ=255)
                                     gCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGtt                                                    >  2:1087736/1‑93 (MQ=255)
                                      gtCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTg                                                   <  2:2766758/92‑1 (MQ=255)
                                      cTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTg                                                   >  2:3147678/1‑93 (MQ=255)
                                      cTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTg                                                   >  2:4948140/1‑93 (MQ=255)
                                       tCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTgc                                                  >  2:5266975/1‑93 (MQ=255)
                                       tCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTgc                                                  >  2:2312763/1‑93 (MQ=255)
                                       tCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTgc                                                  <  1:4352363/93‑1 (MQ=255)
                                       tCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTgc                                                  <  1:1816987/93‑1 (MQ=255)
                                       tCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTgc                                                  <  1:6065919/93‑1 (MQ=255)
                                           ccTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCaa                                              <  1:4125956/93‑1 (MQ=255)
                                            cTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCGGCGATAGTTGCGCAAc                                             >  2:5455726/1‑93 (MQ=255)
                                             tCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAGGATTCTTATTCTGCGATAGTTGCGCAACt                                            >  2:190193/1‑93 (MQ=255)
                                             tCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACt                                            <  2:2164279/93‑1 (MQ=255)
                                                 gAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCt                                        <  2:249301/93‑1 (MQ=255)
                                                 aaaaaaCAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCt                                        <  1:4979405/92‑1 (MQ=255)
                                                      aCAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGaaaa                                   >  2:1612382/1‑93 (MQ=255)
                                                       cAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGaaaaa                                  >  1:3451962/1‑93 (MQ=255)
                                                        aGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAAc                                 >  2:5792676/1‑93 (MQ=255)
                                                         gATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACa                                >  1:5824213/1‑93 (MQ=255)
                                                          aTAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAg                               <  1:2728612/93‑1 (MQ=255)
                                                            aacaacGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGa                             <  2:1507432/93‑1 (MQ=255)
                                                            aacaacGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGa                             >  1:2134911/1‑93 (MQ=255)
                                                              caacGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAat                           >  2:4237932/1‑93 (MQ=255)
                                                               aacGCAAAGATTAATGCTCTTTTACGAGGCATTACTGCTTAGCGAAGATTCTTATACTGCGATAGTTGCGCTACTTCCTGCAAAACAGGAata                          <  1:5486603/93‑1 (MQ=255)
                                                                   cAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAtctc                      >  2:2367526/1‑93 (MQ=255)
                                                                   cAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAtctc                      >  1:1265558/1‑93 (MQ=255)
                                                                   cAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAtctc                      <  2:2554804/93‑1 (MQ=255)
                                                                    aaaGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATctct                     >  1:6034955/1‑93 (MQ=255)
                                                                     aaGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTcta                    >  1:3641435/1‑93 (MQ=255)
                                                                     aaGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCCGAAAAACAGGAATATCTcta                    <  2:899061/93‑1 (MQ=255)
                                                                      aGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTctac                   <  1:398496/93‑1 (MQ=255)
                                                                        aTTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTctacta                 >  2:3982193/1‑93 (MQ=255)
                                                                         ttAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCtactac                <  1:4729186/93‑1 (MQ=255)
                                                                         ttAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCtactac                <  2:4542913/93‑1 (MQ=255)
                                                                           aaTGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACATGAATATCTCTACTACAg              >  1:1768703/1‑93 (MQ=255)
                                                                            aTGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGt             <  2:2438822/93‑1 (MQ=255)
                                                                              gCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtga           >  2:5235139/1‑93 (MQ=255)
                                                                              gCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtga           >  1:5917274/1‑93 (MQ=255)
                                                                              gCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtga           <  2:4276605/93‑1 (MQ=255)
                                                                               ctctTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtgat          <  2:26248/93‑1 (MQ=255)
                                                                               ctctTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtgat          <  1:1553422/93‑1 (MQ=255)
                                                                               ctctTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtgat          <  2:5090666/93‑1 (MQ=255)
                                                                                tctTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtgatg         <  1:5089185/93‑1 (MQ=255)
                                                                                tctTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtgatg         >  1:5251061/1‑93 (MQ=255)
                                                                                tctTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAGCTCTACTACAGtgatg         >  1:5160389/1‑93 (MQ=255)
                                                                                 ctTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtgatga        <  2:4408494/93‑1 (MQ=255)
                                                                                 ctTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtgatga        >  2:2216769/1‑93 (MQ=255)
                                                                                 ctTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtgatga        >  2:4085859/1‑93 (MQ=255)
                                                                                  ttttATGTGGCATTTCTGCATATTGAAGATTCTTATTCTGCTATAGTTGCGCAATTTCTTGTTATTTAGGAATATTTCTACTACATttatgtt       >  1:5646798/1‑91 (MQ=255)
                                                                                  ttttACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGaa       >  1:4062433/1‑93 (MQ=255)
                                                                                   tttACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGCAAAACAGGAATATCTCTACTACAGTGATGAAc      >  2:3332457/1‑93 (MQ=255)
                                                                                   tttACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAAc      >  1:5366497/1‑93 (MQ=255)
                                                                                    ttACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACg     <  2:5906915/93‑1 (MQ=255)
                                                                                     tACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGa    <  2:5873555/93‑1 (MQ=255)
                                                                                     tACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGa    <  2:4830436/93‑1 (MQ=255)
                                                                                      aCGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAg   >  2:342552/1‑93 (MQ=255)
                                                                                       cGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGt  <  1:3235163/93‑1 (MQ=255)
                                                                                          |                                                                                         
TTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGT  >  NC_000913/3663016‑3663195

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: