Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 515,579 T→C I146T (ATC→ACC)  ybbL → putative ATP‑binding component of a transport system

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913515,5790TC99.1% 751.1 / ‑2.7 212I146T (ATC→ACC) ybbLputative ATP‑binding component of a transport system
Reads supporting (aligned to +/- strand):  ref base T (1/1);  new base C (104/106);  total (105/107)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.11e-01

Only 100 of 224 total aligned reads displayed.

TTTTTCTCGATTTTCTCGAACGCTTCGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCATCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGTAATAAACATAACG  >  NC_000913/515489‑515668
                                                                                           |                                                                                         
tttttCTCGATTTTCTCGAACGCTTCGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCAcct                                                                                         >  1:3662007/1‑93 (MQ=255)
tttttCTCGATTTTCTCGAACGCTTCGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCAcct                                                                                         >  2:4876554/1‑93 (MQ=255)
 ttttctcgattttctcgaACGCTTCGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGGGAAAAACAACGCAcctc                                                                                        >  2:5487923/1‑93 (MQ=255)
  tttctcgattttctcgaACGCTTCGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCa                                                                                       >  1:3960330/1‑93 (MQ=255)
   ttctcgattttctcgaACGCTTCGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCAt                                                                                      <  1:4703615/93‑1 (MQ=255)
    tctcgattttctcgaACGCTTCGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCAtt                                                                                     <  1:4553981/93‑1 (MQ=255)
    tctcgattttctcgaACGCTTCGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCAtt                                                                                     <  2:3519723/93‑1 (MQ=255)
    tctcgattttctcgaACGCTTCGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCAtt                                                                                     <  2:3277773/93‑1 (MQ=255)
    tctcgattttctcgaACGCTTCGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCAtt                                                                                     >  1:2661545/1‑93 (MQ=255)
      tcgattttctcgaACGCTTCGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGa                                                                                   >  1:4160423/1‑93 (MQ=255)
      tcgattttctcgaACGCTTCGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGa                                                                                   <  2:2911396/93‑1 (MQ=255)
        gattttctcgaACGCTTCGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGAtt                                                                                 <  1:2758068/93‑1 (MQ=255)
        gattttctcgaACGCTTCGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGAtt                                                                                 >  2:149965/1‑93 (MQ=255)
         attttctcgaACGCTTCGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTc                                                                                >  2:4790367/1‑93 (MQ=255)
          ttttctcgaACGCTTCGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGGTATCTGGTGGCGTAAAACAACGCACCTCAGTGATTct                                                                               >  2:5426457/1‑92 (MQ=255)
             tctcgaACGCTTCGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTaa                                                                            <  1:4160993/93‑1 (MQ=255)
                  aaCGCTTCGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGc                                                                       >  1:5037873/1‑93 (MQ=255)
                  aaCGCTTCGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGc                                                                       >  1:135754/1‑93 (MQ=255)
                    cGCTTCGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCaa                                                                     >  2:3591545/1‑93 (MQ=255)
                      cTTCGCCTTGCCGGACAGCATTTTGACGAAGCATATCGCCGAGCTCTCTGGTGGTGACCACAAACGCACCTCATTGATTCTTAAACTGCACtt                                                                   >  2:282620/1‑93 (MQ=255)
                      cTTCGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAAtt                                                                   <  1:2897988/93‑1 (MQ=255)
                      cTTCGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAAtt                                                                   <  2:1608880/93‑1 (MQ=255)
                       ttCGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAAttt                                                                  >  2:4990533/1‑93 (MQ=255)
                        tCGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTa                                                                 <  1:1132689/93‑1 (MQ=255)
                         cGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTAt                                                                <  1:5671032/93‑1 (MQ=255)
                          gCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATg                                                               >  1:3876071/1‑93 (MQ=255)
                          gCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATg                                                               >  2:469914/1‑93 (MQ=255)
                           ccTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGc                                                              >  2:3777032/1‑93 (MQ=255)
                           ccTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGc                                                              <  1:3506365/93‑1 (MQ=255)
                             ttGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCg                                                            >  2:4699623/1‑93 (MQ=255)
                               gCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGaa                                                          >  1:4686399/1‑93 (MQ=255)
                                ccGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAg                                                         <  1:2780655/93‑1 (MQ=255)
                                 cGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAgg                                                        <  1:1226758/93‑1 (MQ=255)
                                 cGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAgg                                                        >  2:4825739/1‑93 (MQ=255)
                                    aCAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGttt                                                     >  2:5820983/1‑93 (MQ=255)
                                    aCAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGttt                                                     <  2:623872/93‑1 (MQ=255)
                                    aCAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGttt                                                     <  2:4267041/93‑1 (MQ=255)
                                     cAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGtttt                                                    >  1:3182954/1‑93 (MQ=255)
                                     cAGCATTGTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGtttt                                                    >  1:6030385/1‑93 (MQ=255)
                                       gCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGtttttt                                                  <  1:5237764/93‑3 (MQ=255)
                                       gCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTAt                                                  <  2:341063/93‑1 (MQ=255)
                                       gCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTAt                                                  >  1:5877362/1‑93 (MQ=255)
                                         aTTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTg                                                >  2:2595073/1‑93 (MQ=255)
                                         aTTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTg                                                >  2:2359318/1‑93 (MQ=255)
                                          ttttGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGc                                               >  2:4480962/1‑93 (MQ=255)
                                          ttttGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGc                                               >  2:5782150/1‑93 (MQ=255)
                                            ttGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTg                                             >  1:1877910/1‑93 (MQ=255)
                                             tGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCTCCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTgg                                            <  2:888751/93‑1 (MQ=255)
                                             tGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTgg                                            <  1:2559547/93‑1 (MQ=255)
                                              gACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGa                                           <  2:1160176/93‑1 (MQ=255)
                                               aCGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGAt                                          <  1:2303921/93‑1 (MQ=255)
                                                cGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATg                                         <  1:5569211/93‑1 (MQ=255)
                                                cGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATg                                         >  2:3945376/1‑93 (MQ=255)
                                                 gaagaaTATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGa                                        >  1:3766294/1‑93 (MQ=255)
                                                   agaaTATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGaaa                                      <  2:2034120/93‑1 (MQ=255)
                                                    gaaTATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAAt                                     >  2:4129284/1‑93 (MQ=255)
                                                     aaTATCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATa                                    <  1:1468994/93‑1 (MQ=255)
                                                      atatCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGCTGCAATac                                   >  1:3626302/1‑92 (MQ=255)
                                                       tatCGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTTCTGGATGAAATAAc                                  >  1:2977534/1‑93 (MQ=255)
                                                          cGCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAg                               <  1:401558/93‑1 (MQ=255)
                                                           gCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGt                              <  2:5152139/93‑1 (MQ=255)
                                                           gCCGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGt                              >  2:3261928/1‑93 (MQ=255)
                                                            ccGAGCTATCTGGTGGTGAAAAACAACGCATCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTg                             <  1:5344611/93‑1 (MQ=255)
                                                            ccGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTg                             <  1:1314429/93‑1 (MQ=255)
                                                             cGAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTgc                            >  2:5323478/1‑93 (MQ=255)
                                                              gAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTgcg                           >  1:5133150/1‑93 (MQ=255)
                                                              gAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTgcg                           >  1:4904136/1‑93 (MQ=255)
                                                              gAGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTgcg                           >  2:1550399/1‑93 (MQ=255)
                                                               aGCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTgcgc                          >  2:5269283/1‑93 (MQ=255)
                                                                gCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCt                         >  1:2083072/1‑93 (MQ=255)
                                                                gCTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCt                         <  1:6084588/93‑1 (MQ=255)
                                                                 cTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTg                        <  1:1940942/93‑1 (MQ=255)
                                                                 cTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTg                        <  1:4599851/93‑1 (MQ=255)
                                                                 cTATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTg                        <  2:1484364/93‑1 (MQ=255)
                                                                  tATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTgg                       >  2:3004721/1‑93 (MQ=255)
                                                                  tATCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTgg                       >  2:4637850/1‑93 (MQ=255)
                                                                    tCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGAt                     >  2:5691179/1‑93 (MQ=255)
                                                                    tCTGGTGGTGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGAt                     >  2:5900028/1‑93 (MQ=255)
                                                                       ggtggtGAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGaa                  <  2:227599/93‑1 (MQ=255)
                                                                        gtggtgaAAAAACAACCCACCGCATGGTTGCGAAACCGCCATTTTTGCCGGAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGaaa                 <  1:3609884/93‑1 (MQ=255)
                                                                        gtggtgAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGaaa                 <  1:3082017/93‑1 (MQ=255)
                                                                         tggtgAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAg                <  2:5056754/93‑1 (MQ=255)
                                                                          ggtgAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGt               <  1:4755082/93‑1 (MQ=255)
                                                                           gtgAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGta              >  2:6065089/1‑93 (MQ=255)
                                                                             gAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGttat            >  1:4288288/1‑93 (MQ=255)
                                                                             gAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGtaat            <  1:1581383/93‑1 (MQ=255)
                                                                             gAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGtaat            <  2:3678137/93‑1 (MQ=255)
                                                                             gAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGtaat            >  2:5524297/1‑93 (MQ=255)
                                                                             gAAAAACAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGtaaa            >  1:1395957/1‑92 (MQ=255)
                                                                               aaaaaCAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGtaata           >  2:4422502/1‑93 (MQ=255)
                                                                                aaaaCAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGtaataa          <  2:4025177/93‑1 (MQ=255)
                                                                                 aaaCAACGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGTAATaaa         >  1:5430350/1‑93 (MQ=255)
                                                                                   acaacGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGTAATAAACa       <  1:614206/93‑1 (MQ=255)
                                                                                     aacGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGTAATAAACATa     <  2:678781/93‑1 (MQ=255)
                                                                                      acGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGTAATAAACATaa    <  1:5971199/93‑1 (MQ=255)
                                                                                      acGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGTAATAAACATaa    >  2:1943144/1‑93 (MQ=255)
                                                                                       cGCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGTAATAAACATAAc   <  1:5791162/93‑1 (MQ=255)
                                                                                        gCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGTAATAAACATAACg  >  2:4909226/1‑93 (MQ=255)
                                                                                        gCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGTAATAAACATAACg  <  1:795215/93‑1 (MQ=255)
                                                                                        gCACCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGTAATAAACATAACg  >  2:3375258/1‑93 (MQ=255)
                                                                                           |                                                                                         
TTTTTCTCGATTTTCTCGAACGCTTCGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCATCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGTAATAAACATAACG  >  NC_000913/515489‑515668

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: