Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,889,728 C→T A162V (GCG→GTG)  yidY → putative transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,889,7280CT91.3% 691.5 / 37.7 229A162V (GCG→GTG) yidYputative transport protein
Reads supporting (aligned to +/- strand):  ref base C (8/12);  new base T (114/95);  total (122/107)
Fisher's exact test for biased strand distribution p-value = 2.46e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.40e-01

Only 100 of 233 total aligned reads displayed.

TCAACGGTATTACCTGCATCATTCCGGTGTTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGCGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGCCCAGCGGCCCCCGCAGCTTCGGATAAAC  >  NC_000913/3889638‑3889817
                                                                                          |                                                                                         
tCAACGGTATTACCTGCATCATTCCGGTGTTAGCGCCAGAGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGa                                                                                         >  1:5824028/1‑93 (MQ=255)
 cAACGGTATTACCTGCATCATTCCGGTGTTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGAt                                                                                        >  1:2059806/1‑93 (MQ=255)
   aCGGTATTACCTGCATCATTCCGGTGTTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGCGATgg                                                                                      >  2:2028747/1‑93 (MQ=255)
      gTATTACCTGCATCATTCCGGTGTTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCaa                                                                                   <  1:3471835/93‑1 (MQ=255)
       tATTACCTGCATCATTCCGGTGTTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAat                                                                                  >  1:4487751/1‑93 (MQ=255)
       tATTACCTGCATCATTCCGGTGTTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAat                                                                                  <  1:3376972/93‑1 (MQ=255)
       tATTACCTGCATCATTCCGGTGTTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGCGATGGCAat                                                                                  <  1:4629491/93‑1 (MQ=255)
        aTTACCTGCATCATTCCGGTGTTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAatg                                                                                 >  2:662555/1‑93 (MQ=255)
        aTTACCTGCATCATTCCGGTGTTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAatg                                                                                 >  1:1495155/1‑93 (MQ=255)
         ttcccTGCATCATTCCGGTGTTAGCGTGAGTGCTCCGACATCTGATTATGCTTAAATTCCCGTGGCACCGTCTGTTCTGTGCGATGGCAatga                                                                                <  1:2586199/90‑1 (MQ=255)
         ttACCTGCATCATTCCGGTGTTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAatga                                                                                <  1:1817308/93‑1 (MQ=255)
         ttACCTGCATCATTCCGGTGTTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAatga                                                                                <  2:5644038/93‑1 (MQ=255)
         ttACCTGCATCATTCCGGTGTTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAatga                                                                                <  2:2841822/93‑1 (MQ=255)
         ttACCTGCATCATTCCGGTGTTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAatga                                                                                >  2:1682529/1‑93 (MQ=255)
           aCCTGCATCATTCCGGTGTTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAatgatg                                                                              >  2:5240893/1‑93 (MQ=255)
             cTGCATCATTCCGGTGTTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATggg                                                                            <  1:4756070/93‑1 (MQ=255)
              tGCATCATTCCGGTGTTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGc                                                                           <  1:4441904/93‑1 (MQ=255)
              tGCATCATTCCGGTGTTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGc                                                                           >  2:458770/1‑93 (MQ=255)
                 atcatTCCGGTGTTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATc                                                                        <  2:2501017/93‑1 (MQ=255)
                  tcatTCCGGTGTTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATcg                                                                       >  1:3104018/1‑93 (MQ=255)
                    atTCCGGTGTTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATcgcg                                                                     >  1:4858862/1‑93 (MQ=255)
                      tCCGGTGTTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGt                                                                   <  1:5412251/93‑1 (MQ=255)
                       ccGGTGTTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTa                                                                  >  1:3818674/1‑93 (MQ=255)
                        cGGTGTTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTAc                                                                 >  2:2189932/1‑93 (MQ=255)
                          gtgtTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTg                                                               >  2:4429792/1‑93 (MQ=255)
                          gtgtTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGCGATGGCAATGATGGGCATCGCGGTACTg                                                               <  1:5209711/93‑1 (MQ=255)
                            gtTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGAt                                                             <  1:3582294/93‑1 (MQ=255)
                             ttAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGAtg                                                            <  2:5071415/93‑1 (MQ=255)
                             ttAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGCGATGGCAATGATGGGCATCGCGGTACTGAtg                                                            >  2:6022285/1‑93 (MQ=255)
                               aGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGAtgtt                                                          >  2:3467667/1‑93 (MQ=255)
                                 cgcCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGAtgttgt                                                        >  2:2447320/1‑93 (MQ=255)
                                  gcCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGAtgttgtt                                                       >  2:5800498/1‑92 (MQ=255)
                                  gcCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTc                                                       >  1:6087654/1‑93 (MQ=255)
                                   ccAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGCGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCt                                                      >  2:3545711/1‑93 (MQ=255)
                                     aGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCttt                                                    <  2:1307808/93‑1 (MQ=255)
                                        gCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGtt                                                 <  2:1384366/93‑1 (MQ=255)
                                         cTCGGACATCTGGTTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGttt                                                >  1:2468771/1‑93 (MQ=255)
                                          tCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTa                                               <  1:3920649/93‑1 (MQ=255)
                                          tCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTa                                               <  2:1640900/93‑1 (MQ=255)
                                          tCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGCGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTa                                               <  2:2120929/93‑1 (MQ=255)
                                           cGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGCGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTAt                                              <  2:4111138/93‑1 (MQ=255)
                                            ggACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTAtt                                             <  2:4841682/93‑1 (MQ=255)
                                            ggACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTAtt                                             >  1:3880721/1‑93 (MQ=255)
                                            ggACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTAtt                                             >  1:1147708/1‑93 (MQ=255)
                                             gACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTAttt                                            >  1:2480811/1‑93 (MQ=255)
                                              aCATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTAtttt                                           <  2:193409/93‑1 (MQ=255)
                                               cATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTa                                          >  1:2135901/1‑93 (MQ=255)
                                                aTCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTaa                                         >  1:125214/1‑93 (MQ=255)
                                                aTCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTaa                                         >  1:1393423/1‑93 (MQ=255)
                                                aTCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTaa                                         <  1:3705089/93‑1 (MQ=255)
                                                aTCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTaa                                         >  2:3634175/1‑93 (MQ=255)
                                                aTCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGCGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTaa                                         >  1:2719476/1‑93 (MQ=255)
                                                aTCTGAGTATGCTTAAATTCCCGGGGCATAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTaa                                         <  1:498981/93‑1 (MQ=255)
                                                 tCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTaaa                                        <  2:587647/93‑1 (MQ=255)
                                                 tCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTaaa                                        >  2:1782665/1‑93 (MQ=255)
                                                 tCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTaaa                                        <  2:5563200/93‑1 (MQ=255)
                                                  cTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTaaaa                                       <  1:5320136/93‑1 (MQ=255)
                                                  cTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGCGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTaaaa                                       <  1:5718807/93‑1 (MQ=255)
                                                   tGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTaaaaa                                      >  2:1984418/1‑92 (MQ=255)
                                                   tGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGCGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAg                                      <  2:1125482/93‑1 (MQ=255)
                                                    gATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGa                                     <  2:5430885/93‑1 (MQ=255)
                                                    gATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGa                                     <  2:783245/93‑1 (MQ=255)
                                                    gATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGa                                     <  1:577456/93‑1 (MQ=255)
                                                     aTTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGaa                                    <  1:1247017/93‑1 (MQ=255)
                                                     aTTATGCTTAAATTCCCGTGGCAGAGACTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGaa                                    >  2:3115424/1‑93 (MQ=255)
                                                      ttATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGaaa                                   <  1:1927862/93‑1 (MQ=255)
                                                       tATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAAc                                  <  2:2621422/93‑1 (MQ=255)
                                                       tATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAAc                                  <  2:3751390/93‑1 (MQ=255)
                                                        aTGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGGTGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGaaaag                                 >  1:119192/1‑91 (MQ=255)
                                                        aTGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAAcg                                 <  1:4093148/93‑1 (MQ=255)
                                                         tGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGGTGTTGTCTTTGTTTATTTTAAAAGAAAcgc                                >  2:3344376/1‑93 (MQ=255)
                                                         tGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAAcgc                                <  1:1388757/93‑1 (MQ=255)
                                                         tGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAAcgc                                <  2:5785761/93‑1 (MQ=255)
                                                         tGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAAcgc                                <  1:5583133/93‑1 (MQ=255)
                                                           cTTAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACgcgc                              >  2:5325612/1‑93 (MQ=255)
                                                            ttAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGcc                             >  1:2917452/1‑93 (MQ=255)
                                                            ttAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGcc                             >  2:3894349/1‑93 (MQ=255)
                                                             tAAATTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGccc                            >  1:3211574/1‑93 (MQ=255)
                                                              aaaTTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGCCCa                           <  2:2760074/93‑1 (MQ=255)
                                                              aaaTTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGCCCa                           >  2:4685531/1‑93 (MQ=255)
                                                              aaaTTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGCCCa                           <  2:4512651/93‑1 (MQ=255)
                                                               aaTTCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGCCCAg                          <  2:4543557/93‑1 (MQ=255)
                                                                  tCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGCCCAGCgg                       >  2:1848178/1‑93 (MQ=255)
                                                                  tCCCGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGCCCAGCgg                       >  1:887569/1‑93 (MQ=255)
                                                                   cccGTGGCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGCCCAGCGGc                      <  2:3331146/93‑1 (MQ=255)
                                                                        ggCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGCCCAGCGGCCCCCg                 >  1:954954/1‑93 (MQ=255)
                                                                         gCAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGCCCAGCGGCCCCCGc                <  1:6136753/93‑1 (MQ=255)
                                                                          cAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGCCCAGCGGCCCCCGCa               <  1:4146980/93‑1 (MQ=255)
                                                                          cAGAGTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGCCCAGCGGCCCCCGCa               >  2:1430030/1‑93 (MQ=255)
                                                                            gagTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGCCCAGCGGCCCCCGCAGc             <  1:1741899/93‑1 (MQ=255)
                                                                              gTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGCCCAGCGGCCCCCGCAGCtt           >  2:3210844/1‑93 (MQ=255)
                                                                              gTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGCCCAGCGGCCCCCGCAGCtt           >  2:5143191/1‑93 (MQ=255)
                                                                              gTCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGCCCAGCGGCCCCCGCAGCtt           >  1:2238606/1‑93 (MQ=255)
                                                                               tCTGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGCCCAGCGGCCCCCGCAGCTTc          <  2:5364265/93‑1 (MQ=255)
                                                                                 tGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGCCCAGCGGCCCCCGCAGCTTCgg        <  2:3578720/93‑1 (MQ=255)
                                                                                 tGTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGCCCAGCGGCCCCCGCAGCTTCgg        >  1:284022/1‑93 (MQ=255)
                                                                                  gTTCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGCCCAGCGGCCCCCGCAGCTTCGGa       >  1:633875/1‑93 (MQ=255)
                                                                                    tCTGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGCCCAGCGGCCCCCGCAGCTTCGGATa     >  2:2965059/1‑93 (MQ=255)
                                                                                      tGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGCCCAGCGGCCCCCGCAGCTTCGGATaa  >  2:3071862/1‑92 (MQ=255)
                                                                                      tGGGTGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGCCCAGCGGCCCCCGCAGCTTCGGATaaa   >  2:4356439/1‑93 (MQ=255)
                                                                                          |                                                                                         
TCAACGGTATTACCTGCATCATTCCGGTGTTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGCGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGCCCAGCGGCCCCCGCAGCTTCGGATAAAC  >  NC_000913/3889638‑3889817

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: