BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,948,087	G→A	intergenic (+44/‑96)	ilvL → / → ilvG	ilvGEDA operon leader peptide/acetolactate synthase II large subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,948,087	0	G	A	100.0%	693.8 / NA	185	intergenic (+44/‑96)	ilvL/ilvG	ilvGEDA operon leader peptide/acetolactate synthase II large subunit
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (107/78); total (107/78)

Only 100 of 198 total aligned reads displayed.

ATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAA  >  NC_000913/3947996‑3948176

 ttattaTCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCagg                                                                                         >  2:5783651/1‑93 (MQ=255)

 ttattaTCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCagg                                                                                         <  2:4329416/93‑1 (MQ=255)

  tattatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCaggg                                                                                        >  1:897594/1‑93 (MQ=255)

   attatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCagggg                                                                                       >  1:5293691/1‑93 (MQ=255)

    ttatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGt                                                                                      <  1:5527277/93‑1 (MQ=255)

     tatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGtt                                                                                     >  2:4913039/1‑93 (MQ=255)

       tCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGtttt                                                                                   >  2:4594705/1‑93 (MQ=255)

       tCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGattt                                                                                   >  2:3557869/1‑93 (MQ=255)

         ccACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGtttttt                                                                                 >  1:4991825/1‑93 (MQ=255)

          cACCGTGCGGGGATGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGttttttt                                                                                <  1:3227279/93‑1 (MQ=255)

            ccGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTg                                                                              <  1:2697943/93‑1 (MQ=255)

             cGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTgc                                                                             >  1:2417975/1‑92 (MQ=255)

              gTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGAc                                                                            >  2:5529143/1‑93 (MQ=255)

               tGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGAcc                                                                           <  1:4199969/93‑1 (MQ=255)

                gCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCt                                                                          >  2:2503898/1‑93 (MQ=255)

                  ggggCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTa                                                                        >  1:192014/1‑93 (MQ=255)

                     gCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTaaaa                                                                     >  1:5348012/1‑93 (MQ=255)

                      cTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTaaaaa                                                                    <  2:3517808/93‑1 (MQ=255)

                       tGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTaaaaaa                                                                   >  1:1386984/1‑92 (MQ=255)

                       tGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAAc                                                                   >  2:128492/1‑93 (MQ=255)

                       tGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAAc                                                                   <  2:5986816/93‑1 (MQ=255)

                       tGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAAc                                                                   <  1:4813610/93‑1 (MQ=255)

                        gCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACa                                                                  >  2:1608700/1‑93 (MQ=255)

                          aCTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATa                                                                <  2:5831540/93‑1 (MQ=255)

                            ttGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACTCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAaaaacaaaac                                                              >  2:4565525/1‑93 (MQ=255)

                            ttGGACGAGAAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAAc                                                              <  2:5352399/93‑1 (MQ=255)

                             tGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAAcc                                                             >  1:2020817/1‑93 (MQ=255)

                                aCGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCgag                                                          <  2:4000229/93‑1 (MQ=255)

                                 cGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCgagg                                                         <  2:2018824/93‑1 (MQ=255)

                                  gAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCgagga                                                        >  2:2739285/1‑93 (MQ=255)

                                  gAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCgagga                                                        <  2:403475/93‑1 (MQ=255)

                                    ggAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGc                                                      >  2:1895828/1‑93 (MQ=255)

                                      aaaGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAg                                                    >  1:3443977/1‑93 (MQ=255)

                                       aaGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGa                                                   <  2:6081520/93‑1 (MQ=255)

                                        aGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGAc                                                  >  1:2220618/1‑93 (MQ=255)

                                           cTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAATAAAATAACCGAGGAGCAGACaaa                                               >  1:1831518/1‑92 (MQ=255)

                                           cTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAAt                                               >  2:713797/1‑93 (MQ=255)

                                            ttAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATg                                              <  1:1445778/93‑1 (MQ=255)

                                             tAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGa                                             >  1:4289807/1‑93 (MQ=255)

                                              agagATCAAGCCTTAACGACCTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGaa                                            >  1:1798569/1‑93 (MQ=255)

                                               gagaTCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAAt                                           <  1:988786/93‑1 (MQ=255)

                                                agaTCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATa                                          >  1:3866670/1‑93 (MQ=255)

                                                agaTCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATa                                          >  1:4716323/1‑93 (MQ=255)

                                                agaTCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATa                                          <  2:2158648/93‑1 (MQ=255)

                                                 gaTCAAGCATTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATaa                                         >  1:4541392/1‑93 (MQ=255)

                                                  aTCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAAc                                        <  2:5711807/93‑1 (MQ=255)

                                                  aTCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAAc                                        <  2:3141843/93‑1 (MQ=255)

                                                   tCAAGCCTTAACGAACTTAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACa                                       >  2:1040659/1‑93 (MQ=255)

                                                   tCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACa                                       >  2:2275178/1‑93 (MQ=255)

                                                   tCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACa                                       >  2:3377253/1‑93 (MQ=255)

                                                   tCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACa                                       <  1:4766116/93‑1 (MQ=255)

                                                    cAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAg                                      >  1:3462912/1‑93 (MQ=255)

                                                    cAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAg                                      <  2:4829059/93‑1 (MQ=255)

                                                     aaGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGc                                     <  2:5974388/93‑1 (MQ=255)

                                                      aGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGca                                    >  2:1306010/1‑93 (MQ=255)

                                                      aGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGca                                    >  1:5796496/1‑93 (MQ=255)

                                                         cTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAGCCGAGGAGCAGACAATGAATAACAGCACaa                                 >  1:6010850/1‑93 (MQ=255)

                                                          ttAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACaaa                                >  2:3634300/1‑93 (MQ=255)

                                                           tAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACaaaa                               >  2:1716823/1‑93 (MQ=255)

                                                            aaCGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAAt                              <  2:2401333/93‑1 (MQ=255)

                                                               gAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCt                           >  1:4124226/1‑93 (MQ=255)

                                                                 aCTAAGACCCCCGCCCCGAAAGGCCCAGGGGTTTTTTTTGACCTTAAAAACAAAACCAAGGGGCAGCCAAGGAATAACAGCACAAAATTCTGt                         >  1:5876913/1‑93 (MQ=255)

                                                                 aCTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGt                         <  1:723481/93‑1 (MQ=255)

                                                                 aCTAAGACCCCCGCACCGAAAGGTCCAGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGt                         >  2:4497228/1‑93 (MQ=255)

                                                                  cTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGtt                        >  2:1527175/1‑93 (MQ=255)

                                                                  cTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGtt                        >  2:134341/1‑93 (MQ=255)

                                                                  cTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGtt                        >  1:1073186/1‑93 (MQ=255)

                                                                    aaGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtc                      >  2:1560389/1‑93 (MQ=255)

                                                                    aaGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtc                      <  2:4223716/93‑1 (MQ=255)

                                                                    aaGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtc                      >  1:3907210/1‑93 (MQ=255)

                                                                      gACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtctc                    <  2:5659735/93‑1 (MQ=255)

                                                                       aCCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCa                   <  2:5116453/93‑1 (MQ=255)

                                                                       aCCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCa                   <  1:5620712/93‑1 (MQ=255)

                                                                        cccccGCACGGAAAGGTCCAGGAGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCaa                  <  2:3217831/93‑1 (MQ=255)

                                                                         ccccGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCCCAAg                 >  2:4772640/1‑93 (MQ=255)

                                                                         ccccGCACCGAAAGGTCCAGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAg                 >  1:1052166/1‑93 (MQ=255)

                                                                          cccGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGa                <  2:2683255/93‑1 (MQ=255)

                                                                          cccGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGa                <  1:1112691/93‑1 (MQ=255)

                                                                          cccGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAACACAAAATTCTGTTTCTCAAGa                >  2:801866/1‑93 (MQ=255)

                                                                           ccGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGAt               >  2:1496247/1‑93 (MQ=255)

                                                                           ccGCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTATTAAGAt               >  2:3799622/1‑93 (MQ=255)

                                                                             gCACCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCTCAAAATTCTGTTTCTCAAGATTc             >  1:3530164/1‑93 (MQ=255)

                                                                               cacGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAg           <  2:5340478/91‑1 (MQ=255)

                                                                               aCCGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAg           >  2:2596912/1‑93 (MQ=255)

                                                                                ccGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAgg          <  2:4185586/93‑1 (MQ=255)

                                                                                ccGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAgg          >  1:361627/1‑93 (MQ=255)

                                                                                ccGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAgg          <  1:2177518/93‑1 (MQ=255)

                                                                                 cGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGGGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAgta         >  1:5078270/1‑91 (MQ=255)

                                                                                 cGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGa         <  1:1556897/93‑1 (MQ=255)

                                                                                 cGAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGa         <  2:3707345/93‑1 (MQ=255)

                                                                                  gAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGAc        <  2:4133655/93‑1 (MQ=255)

                                                                                  gAAAGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGAc        <  2:3058632/93‑1 (MQ=255)

                                                                                    aaGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACgg      <  2:31945/93‑1 (MQ=255)

                                                                                    aaGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACgg      <  2:5673959/93‑1 (MQ=255)

                                                                                     aGGTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATACCAGCACAAAATTCTGTTTCTCAAGATTCAGGACggg     >  1:5542153/1‑93 (MQ=255)

                                                                                       gTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGa   >  2:5185795/1‑93 (MQ=255)

                                                                                       gTCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGa   <  2:1806862/93‑1 (MQ=255)

                                                                                        tCCAGGGGTTTTTTTTGACCTTAAAACCATAACCGGGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaa  <  1:4759975/93‑1 (MQ=255)

                                                                                        tCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACGGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaa  >  1:96938/1‑93 (MQ=255)

                                                                                        tCCAGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGGCGGGGaa  <  1:2844959/93‑1 (MQ=255)

ATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAA  >  NC_000913/3947996‑3948176

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`