| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 561,644 | A→G | Y27C (TAT→TGT) | sfmH → | involved in fimbrial asembly |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 561,644 | 0 | A | G | 92.4% | 612.8 / 32.2 | 197 | Y27C (TAT→TGT) | sfmH | involved in fimbrial asembly |
| Reads supporting (aligned to +/- strand): ref base A (7/8); new base G (76/106); total (83/114) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.69e-01 | |||||||||||
Only 100 of 202 total aligned reads displayed.
ATTATTATTGGCGATGGCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTATGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAG > NC_000913/561552‑561733 | tattattGGCGATGGCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACtgtg > 1:4763526/1‑93 (MQ=255) ntnattGNCGATGGCATGTTTNTNTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGa < 2:5331066/92‑1 (MQ=255) attattGGCGATGGCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGa < 2:5966372/93‑1 (MQ=255) attattGGCGATGGCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGa < 2:13393/93‑1 (MQ=255) attattGGCGATGGCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGa > 2:1427585/1‑93 (MQ=255) ttattGGCGATGGCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGAt > 2:474864/1‑93 (MQ=255) ttattGGCGATGGCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGAt < 2:1763368/93‑1 (MQ=255) tattGACGATGACATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGAtc < 1:5839335/93‑1 (MQ=255) ttGGCGATGGCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGAtctc < 2:1961138/93‑1 (MQ=255) tGGCGATGGCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGAtctct < 1:5730646/93‑1 (MQ=255) ggCGATGGCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGAtctctc < 1:3802161/93‑1 (MQ=255) ggCGATGGCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGAtctctc > 1:1156688/1‑93 (MQ=255) ggCGATGGCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGAtctctc < 1:1122220/93‑1 (MQ=255) ggCGATGGCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGAtctctc > 2:78269/1‑93 (MQ=255) gATGGCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCaaa < 1:254798/93‑1 (MQ=255) aTGGCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAat > 2:2270229/1‑93 (MQ=255) aTGGCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAat < 2:4398930/93‑1 (MQ=255) aTGGCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAat > 2:5810862/1‑93 (MQ=255) aTGGCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAat < 1:3950816/93‑1 (MQ=255) aTGGCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAat > 2:1068366/1‑93 (MQ=255) tGGCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAata > 1:1715198/1‑93 (MQ=255) tGGCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAata < 1:2705858/93‑1 (MQ=255) tGGCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAata > 2:4096449/1‑93 (MQ=255) gCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATc > 1:455086/1‑93 (MQ=255) gCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATc < 2:3666324/93‑1 (MQ=255) cATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCt > 2:5005457/1‑93 (MQ=255) aTGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCtt < 1:1886930/93‑1 (MQ=255) tGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCttt > 1:242009/1‑93 (MQ=255) tGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCttt < 1:4557925/93‑1 (MQ=255) tGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCttt < 2:4192294/93‑1 (MQ=255) tGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCttt > 1:543655/1‑93 (MQ=255) tGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCttt < 2:1551083/93‑1 (MQ=255) tGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCttt > 1:1963190/1‑93 (MQ=255) tttGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTaa < 1:1380765/93‑1 (MQ=255) tttGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTaa > 2:2040443/1‑93 (MQ=255) tttGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTaa > 2:6038409/1‑93 (MQ=255) tgtgTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATa < 1:918649/93‑1 (MQ=255) tgtCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGc < 1:426145/93‑1 (MQ=255) tgtCTGGCAAACATATCCGGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGc < 1:3038898/93‑1 (MQ=255) gccaaCATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAAt < 1:291738/90‑1 (MQ=255) gaaaCATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATa < 2:2881502/92‑1 (MQ=255) cAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATa > 2:2724718/1‑93 (MQ=255) aaCATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAAc < 1:4901856/93‑1 (MQ=255) aaCATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAAc > 1:2129960/1‑93 (MQ=255) aCATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAAcc < 1:4690687/93‑1 (MQ=255) aCATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAAcc > 1:1621647/1‑93 (MQ=255) cATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAAcca < 1:2871538/93‑1 (MQ=255) atatCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAAccag < 1:1481042/93‑1 (MQ=255) atCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAAccagcc < 2:167793/93‑1 (MQ=255) atCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAAccagcc < 2:3779566/93‑1 (MQ=255) atCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTATGATCTCTCAAATATCTTTAATAGCACCAATAAccagcc < 1:5809053/93‑1 (MQ=255) tCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTATGATCTCTCAAATATCTTTAATAGCACCAATAAccagcca < 1:5134626/93‑1 (MQ=255) ccTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAAccagccag < 1:2320448/93‑1 (MQ=255) ccTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAAccagccag < 1:3263890/93‑1 (MQ=255) cTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAgg < 1:2587889/93‑1 (MQ=255) tGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAggg < 1:376505/93‑1 (MQ=255) gggCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGc < 2:4552740/93‑1 (MQ=255) gggCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGc > 1:3635093/1‑93 (MQ=255) ggCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCa < 1:2819807/93‑1 (MQ=255) gCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAg < 2:5358051/93‑1 (MQ=255) tACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGAt < 1:4140994/93‑1 (MQ=255) tACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGAt > 2:2748068/1‑93 (MQ=255) tACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGAt > 2:3298706/1‑93 (MQ=255) cTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTATGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGAttg > 2:4255975/1‑93 (MQ=255) tGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGAttgt < 2:5440148/93‑1 (MQ=255) tGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGAttgt > 1:917596/1‑93 (MQ=255) gTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGAttgtt < 1:1281420/93‑1 (MQ=255) gTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGAttgtt > 2:4871554/1‑93 (MQ=255) ttGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATtgttgt < 2:1636842/93‑1 (MQ=255) tgtgCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTgttgtt < 1:4834948/93‑1 (MQ=255) tgCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGtttt < 2:1455772/93‑1 (MQ=255) tgCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGtttt < 2:31305/93‑1 (MQ=255) gCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTa < 2:2579076/93‑1 (MQ=255) gCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTa < 2:6128268/93‑1 (MQ=255) gCAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTa > 1:1000409/1‑93 (MQ=255) cAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTAc < 2:511927/93‑1 (MQ=255) cAAATAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTAc < 2:5859494/93‑1 (MQ=255) aaTAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCg < 1:5597589/93‑1 (MQ=255) aTAGTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCgg < 1:3374598/93‑1 (MQ=255) gTACTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGaaa > 1:3721916/1‑93 (MQ=255) aCTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGaaaaa > 1:3176304/1‑93 (MQ=255) cTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAAt > 2:32341/1‑93 (MQ=255) cTGGCGTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAAt > 2:5027873/1‑93 (MQ=255) gTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAGTCCGGc < 1:5107601/93‑1 (MQ=255) gTAGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGc < 1:6117684/93‑1 (MQ=255) aGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTg > 1:1670448/1‑93 (MQ=255) aGCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTg < 2:3066281/93‑1 (MQ=255) gCAGAAGATGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTgg > 1:2270237/1‑93 (MQ=255) agaagaTGAACACTGTGATCTCTCAAGTATCTTTAATATCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGt < 2:746049/93‑1 (MQ=255) agaagaTGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTAGGt < 2:196542/93‑1 (MQ=255) agaagaTGAACACTATGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGt > 2:2931367/1‑93 (MQ=255) gaagaTGAACACTGTGATCTCTCATATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTa > 2:1846857/1‑93 (MQ=255) gaagaTGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTa > 2:548764/1‑93 (MQ=255) gaagaTGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCAGGCTGGGTa > 2:516431/1‑93 (MQ=255) aagaTGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAg < 1:1510434/93‑1 (MQ=255) tGAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGgtgt > 2:5241532/1‑93 (MQ=255) tGAACACTATGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGgtgt > 2:1170880/1‑93 (MQ=255) gAACACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGtc < 2:5593917/93‑1 (MQ=255) gAACACTGTGATCTCTCAAATATCTTTAATAGAACCAATAACCAGCAAGGGCAGTTGGTTGTTTTACCGGAAAAATCCGGCTGGGAGGgtgcc > 1:1063966/1‑91 (MQ=255) aaCACTGTGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGtct > 2:2260132/1‑93 (MQ=255) | ATTATTATTGGCGATGGCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTATGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAG > NC_000913/561552‑561733 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |