BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,019,857	C→T	intergenic (+56/‑28)	b3836 → / → b3838	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,019,857	0	C	T	100.0%	752.5 / NA	200	intergenic (+56/‑28)	b3836/b3838	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (106/94); total (106/94)

Only 100 of 207 total aligned reads displayed.

AGACGCGAAGCGCCACGATAAAGAGCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGCCGCCTTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCGCGTTGCGTTCACTGGCGACAACGG  >  NC_000913/4019768‑4019942

agaCGCGAAGCGCCACGATAAAGAGCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCtcgtcgt                                                                                    <  1:5635150/93‑2 (MQ=255)

 gaCGCGAAGCGCCACGATAAAGAGCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCtcgtcgtt                                                                                   <  1:5927415/93‑3 (MQ=255)

  aCGCGAAGCGCCACGATAAAGAGCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCtcgtcgttc                                                                                  >  2:2069442/1‑90 (MQ=255)

        aGCGCCACGATAAAGAGCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGc                                                                          <  1:3164714/93‑1 (MQ=255)

        aGCGCCACGATAAAGAGCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGc                                                                          <  2:4233776/93‑1 (MQ=255)

        aGCGCCACGATAAAGAGCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGc                                                                          >  1:1775666/1‑93 (MQ=255)

        aGCGCCACGATAAAGAGCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGc                                                                          <  2:1576289/93‑1 (MQ=255)

           gcCACGATAAAGGGCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCAAACTGCTATTGGTGTTCATCATCGGCCACGTCG‑‑TTCTGGGGCCGc                                                                       <  1:5492960/93‑1 (MQ=255)

           gcCACGATAAAGAGCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGc                                                                       >  2:5188167/1‑93 (MQ=255)

           gcCACGATAAAGAGCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGc                                                                       <  2:655967/93‑1 (MQ=255)

           gcCACGATAAAGAGCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGc                                                                       >  2:5844928/1‑93 (MQ=255)

            ccACGATAAAGAGCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCa                                                                      >  2:89468/1‑93 (MQ=255)

             cACGATAAAGAGCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCaa                                                                     <  1:3293982/93‑1 (MQ=255)

             cACGATAAAGAGCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCaa                                                                     <  1:64626/93‑1 (MQ=255)

              aCGATAAAGAGCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAAc                                                                    >  2:1105007/1‑93 (MQ=255)

              aCGATAAAGAGCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAAc                                                                    <  2:310256/93‑1 (MQ=255)

               cGATAAAGAGCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACg                                                                   >  1:3510613/1‑93 (MQ=255)

                gATAAAGAGCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGa                                                                  <  2:902236/93‑1 (MQ=255)

                 aTAAAGAGCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGAc                                                                 <  1:3839613/93‑1 (MQ=255)

                  tAAAGAGCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACt                                                                <  1:3657801/93‑1 (MQ=255)

                  tAAAGAGCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACt                                                                >  1:2667839/1‑93 (MQ=255)

                   aaaGAGCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTg                                                               >  2:3249042/1‑93 (MQ=255)

                    aaGAGCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGc                                                              <  1:274420/93‑1 (MQ=255)

                      gagCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCt                                                            >  1:1287546/1‑93 (MQ=255)

                        gCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGGCGCAACGACTGCCtgt                                                          >  1:3797027/1‑93 (MQ=255)

                        gCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCtgt                                                          <  1:1443488/93‑1 (MQ=255)

                         cAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCtgtg                                                         <  1:3103582/93‑1 (MQ=255)

                         cAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCtgtg                                                         <  2:2565645/93‑1 (MQ=255)

                         cAGGTGTAATCCGTGTTTGATATCGGTTGTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCtgtg                                                         <  2:3120590/93‑1 (MQ=255)

                          aGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTgg                                                        >  1:2787759/1‑93 (MQ=255)

                           ggTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGc                                                       >  2:2201460/1‑93 (MQ=255)

                           ggTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGc                                                       <  2:2382505/93‑1 (MQ=255)

                           ggTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGc                                                       >  1:1395413/1‑93 (MQ=255)

                            gtgtAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCg                                                      >  2:1942399/1‑93 (MQ=255)

                             tgtAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCgg                                                     >  1:5373929/1‑93 (MQ=255)

                               tAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTa                                                   <  1:4661740/93‑1 (MQ=255)

                               tAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCAGTa                                                   >  2:509263/1‑93 (MQ=255)

                                   ccGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTaaaaa                                               <  2:3585877/93‑1 (MQ=255)

                                   ccGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTaaaaa                                               <  1:1910715/93‑1 (MQ=255)

                                   ccGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTaaaaa                                               <  2:6061253/93‑1 (MQ=255)

                                   ccGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTaaaaa                                               <  2:1266409/93‑1 (MQ=255)

                                   ccGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTaaaaa                                               <  1:878034/93‑1 (MQ=255)

                                    cGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAAc                                              >  2:2297213/1‑93 (MQ=255)

                                    cGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAAc                                              >  2:2095648/1‑93 (MQ=255)

                                     gtgtTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACg                                             >  2:1856672/1‑93 (MQ=255)

                                     gtgtTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACg                                             <  2:5420507/93‑1 (MQ=255)

                                       gtTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGt                                           <  2:505943/93‑1 (MQ=255)

                                       gtTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGt                                           <  2:4170272/93‑1 (MQ=255)

                                        tttGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTa                                          >  1:5870307/1‑93 (MQ=255)

                                        tttGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTATGGCGGTAAAAACGGTa                                          <  1:2244973/93‑1 (MQ=255)

                                          tGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGc                                        >  1:5712520/1‑93 (MQ=255)

                                          tGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGc                                        <  1:2798655/93‑1 (MQ=255)

                                            atatCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCgg                                      <  2:4813215/93‑1 (MQ=255)

                                             tatCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCggg                                     >  1:6030696/1‑93 (MQ=255)

                                              atCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGc                                    >  2:2485555/1‑93 (MQ=255)

                                              atCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGc                                    >  1:3376813/1‑93 (MQ=255)

                                                 ggTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTgg                                 >  1:2518925/1‑93 (MQ=255)

                                                  gTTTTAGCGAACTGCTATTGGTTTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGa                                <  1:1882391/93‑1 (MQ=255)

                                                  gTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGa                                <  2:5466202/93‑1 (MQ=255)

                                                  gTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGa                                <  2:2701133/93‑1 (MQ=255)

                                                  gTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGa                                >  1:1554777/1‑93 (MQ=255)

                                                   ttttAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGAt                               >  2:4013576/1‑93 (MQ=255)

                                                   ttttAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGAt                               >  2:2018664/1‑93 (MQ=255)

                                                     ttAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTc                             <  2:1355903/93‑1 (MQ=255)

                                                     ttAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTc                             <  1:5552114/93‑1 (MQ=255)

                                                        gCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTcgcg                          >  2:3849142/1‑93 (MQ=255)

                                                         aaaaCTGCTATGGGTGTTCATCATCGGCCTCTTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTcgcgc                         <  2:907278/91‑1 (MQ=255)

                                                          gAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTcgcgcg                        >  1:4679989/1‑93 (MQ=255)

                                                          gAACTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTcgcgcg                        >  1:4852109/1‑93 (MQ=255)

                                                           aaCTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCgcgt                       <  2:2232468/93‑1 (MQ=255)

                                                           aaCTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCgcgt                       >  1:4965553/1‑93 (MQ=255)

                                                            aCTGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCgcgtt                      >  1:1971083/1‑93 (MQ=255)

                                                              tGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCTGTAAAAACGGCAGCGCGCTGGACTCGAccgttgc                    >  1:1122736/1‑93 (MQ=255)

                                                              tGCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCgcgttgc                    >  1:358312/1‑93 (MQ=255)

                                                               gCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCgcgttgcg                   >  1:3351395/1‑93 (MQ=255)

                                                               gCTATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCgcgttgcg                   >  1:5177850/1‑93 (MQ=255)

                                                                 tATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCgcgttgcgtt                 >  2:5330642/1‑93 (MQ=255)

                                                                 tATTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCgcgttgcgtt                 <  1:4577899/93‑1 (MQ=255)

                                                                  aTTGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCGCGTTGCGTTc                <  1:4055531/93‑1 (MQ=255)

                                                                   ttGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCGCGTTGCGTTCa               <  2:1661765/93‑1 (MQ=255)

                                                                   ttGGTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCGCGTTGCGTTCa               >  2:3337791/1‑93 (MQ=255)

                                                                    tGGTGTGCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCGCGTTGCGTTCAc              <  1:5763099/93‑1 (MQ=255)

                                                                     ggTGTTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCGCGTTGCGTTCACt             <  1:261219/93‑1 (MQ=255)

                                                                      gtgtTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCGCGTTGCGTTCACTg            >  2:3700142/1‑93 (MQ=255)

                                                                      gtgtTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCGCGTTGCGTTCACTg            <  1:3215391/93‑1 (MQ=255)

                                                                      gtgtTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCGCGTTGCGTTCACTg            <  2:5376675/93‑1 (MQ=255)

                                                                      gtgtTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCGCGTTGCGTTCACTg            <  1:3323528/93‑1 (MQ=255)

                                                                        gtTCATCATCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCGCGTTGCGTTCACTGGc          <  1:3284539/93‑1 (MQ=255)

                                                                         ttCATCATCAGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCGCGTTGCGTTCACTGGCg         >  1:903261/1‑93 (MQ=255)

                                                                          tcatcaTCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCGCGTTGCGTTCACTGGCGa        <  2:3041180/93‑1 (MQ=255)

                                                                           catcatCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCGCGTTGCGTTCACTGGCgcc       >  1:2317865/1‑91 (MQ=255)

                                                                           catcatCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCGCGTTGCGTTCACTGGCGAc       >  1:5814233/1‑93 (MQ=255)

                                                                           catcatCGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCGCGTTGCGTTCACTGGCGAc       >  2:2938681/1‑93 (MQ=255)

                                                                             tcatcGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCGCGTTGCGTTCACTGGCGACaa     >  1:1068421/1‑93 (MQ=255)

                                                                             tcatcGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCGCGTTGCGTTCACTGGCGACaa     >  2:3215223/1‑93 (MQ=255)

                                                                             tcatcGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCGCGTTGCGTTCACTGGCGACaa     <  2:3496101/93‑1 (MQ=255)

                                                                             tcatcGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGGAAAAACGGTAGCGGGCTGGATTCGCGCGTTGCGTTCACTGGCGACaa     >  1:5117754/1‑93 (MQ=255)

                                                                              catcGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCGCGTTGCGTTCACTGGCGACAAc    <  1:5412752/93‑1 (MQ=255)

                                                                               atcGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCGCGTTGCGTTCACTGGCGACAACg   >  2:4583457/1‑93 (MQ=255)

                                                                               atcGGCCTCGTCG‑‑TTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCGCGTTGCGTTCACTGGCGACAACg   <  2:1624949/93‑1 (MQ=255)

AGACGCGAAGCGCCACGATAAAGAGCAGGTGTAATCCGTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGCCGCCTTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCGCGTTGCGTTCACTGGCGACAACGG  >  NC_000913/4019768‑4019942

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`