BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,156,159	A→G	T31A (ACG→GCG)	oxyR →	OxyR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,156,159	0	A	G	100.0%	763.7 / NA	213	T31A (ACG→GCG)	oxyR	OxyR
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (104/109); total (104/109)

Only 100 of 228 total aligned reads displayed.

TAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCG  >  NC_000913/4156067‑4156248

tAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGa                                                                                           >  2:3956080/1‑93 (MQ=255)

  aTGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCg                                                                                         >  1:5802609/1‑93 (MQ=255)

   tGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGgcgc                                                                                        <  2:434237/93‑1 (MQ=255)

   tGAATATTCGTGATCTTGAGTACCTGGGGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGgcgc                                                                                        >  1:556420/1‑93 (MQ=255)

    gAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGCACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCt                                                                                       <  2:3399422/93‑1 (MQ=255)

     aaTATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCtt                                                                                      >  2:158983/1‑93 (MQ=255)

      atatTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTa                                                                                     <  1:5208529/93‑1 (MQ=255)

       tatTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAg                                                                                    >  1:2962794/1‑93 (MQ=255)

       tatTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAg                                                                                    <  2:19595/93‑1 (MQ=255)

        atTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGc                                                                                   <  1:4880973/93‑1 (MQ=255)

         ttCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCg                                                                                  >  1:6133072/1‑93 (MQ=255)

         ttCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCg                                                                                  <  2:5232403/93‑1 (MQ=255)

         ttCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTACCg                                                                                  >  2:2005235/1‑93 (MQ=255)

           cGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCggg                                                                                <  2:4127510/93‑1 (MQ=255)

            gTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGc                                                                               <  2:5156043/93‑1 (MQ=255)

              gATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCaa                                                                             >  1:1910093/1‑93 (MQ=255)

               aTCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCaaa                                                                            >  1:2556362/1‑93 (MQ=255)

               aTCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCaaa                                                                            <  1:1022771/93‑1 (MQ=255)

                tCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAAt                                                                           >  2:3126990/1‑93 (MQ=255)

                 cTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAAtt                                                                          >  1:2834013/1‑93 (MQ=255)

                 cTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAAtt                                                                          <  1:2482066/93‑1 (MQ=255)

                 cTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAAtt                                                                          >  1:5642651/1‑93 (MQ=255)

                 cTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAAtt                                                                          >  1:4362471/1‑93 (MQ=255)

                   tGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCg                                                                        >  1:2427323/1‑93 (MQ=255)

                      gTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTaa                                                                     <  1:3019653/93‑1 (MQ=255)

                      gTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTaa                                                                     <  1:1666842/93‑1 (MQ=255)

                      gTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTaa                                                                     <  1:3269731/93‑1 (MQ=255)

                      gTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTaa                                                                     >  1:5978030/1‑93 (MQ=255)

                        gccTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGc                                                                   <  2:6017201/92‑1 (MQ=255)

                        aCCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGc                                                                   >  2:3619195/1‑93 (MQ=255)

                        aCCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGc                                                                   >  1:2036526/1‑93 (MQ=255)

                         ccTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCt                                                                  >  2:1125197/1‑93 (MQ=255)

                         ccTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCt                                                                  >  2:4140640/1‑93 (MQ=255)

                          cTGGTGGCATTGGCTGCACACCGCCGTTTGCGGCGGGCGGCACATTCCGGCCACGTGAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTg                                                                 <  2:362966/93‑1 (MQ=255)

                          cTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTg                                                                 <  2:1849444/93‑1 (MQ=255)

                           tggtggCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTgg                                                                >  1:576941/1‑93 (MQ=255)

                           tggtggCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTgg                                                                <  1:5394111/93‑1 (MQ=255)

                            ggtggCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGa                                                               >  2:4480446/1‑93 (MQ=255)

                             gtggCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGaa                                                              <  1:1742396/93‑1 (MQ=255)

                              tggCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAg                                                             <  2:4712694/93‑1 (MQ=255)

                                 cATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATg                                                          <  2:5875681/93‑1 (MQ=255)

                                 cATTGGCTGAACACCGCCATTTTCGGCCTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAAGTCGTGATCTGGAAGATg                                                          >  1:2599048/1‑93 (MQ=255)

                                  aTTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGa                                                         <  2:1288666/93‑1 (MQ=255)

                                  aTTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGa                                                         <  1:3202978/93‑1 (MQ=255)

                                  aTTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGa                                                         >  2:2006388/1‑93 (MQ=255)

                                    tGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGc                                                       <  2:133253/93‑1 (MQ=255)

                                    tGGCGGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGc                                                       <  2:4555894/93‑1 (MQ=255)

                                      gCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTg                                                     <  2:738399/93‑1 (MQ=255)

                                       cTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTgg                                                    <  2:1466399/93‑1 (MQ=255)

                                         gAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGc                                                  >  2:5947265/1‑93 (MQ=255)

                                            cacCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTg                                               <  2:5578826/93‑1 (MQ=255)

                                            cacCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTg                                               <  2:2664885/93‑1 (MQ=255)

                                             acCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGa                                              >  1:1092372/1‑93 (MQ=255)

                                             acCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGa                                              >  1:1776434/1‑93 (MQ=255)

                                               cGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATg                                            >  1:745276/1‑93 (MQ=255)

                                               cGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATg                                            >  1:5204489/1‑93 (MQ=255)

                                                 ccATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGtt                                          >  1:4924676/1‑93 (MQ=255)

                                                   aTTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGc                                        >  1:920668/1‑93 (MQ=255)

                                                     tttCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTg                                      <  2:8372/93‑1 (MQ=255)

                                                      ttCGGCGTGCGGCAGATTCCTGCCACGTTATCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTgg                                     <  1:943384/93‑1 (MQ=255)

                                                      ttCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTgg                                     <  2:1386925/93‑1 (MQ=255)

                                                      ttCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTgg                                     <  2:3710156/93‑1 (MQ=255)

                                                       tCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGa                                    <  1:3787409/93‑1 (MQ=255)

                                                       tCGGCGGCCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGa                                    <  1:1485130/93‑1 (MQ=255)

                                                        cGGCGTGCGCCAGTTTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAg                                   <  1:5861481/93‑1 (MQ=255)

                                                           cGTGCGGCAGATTCCTGCCACGTTAGCCCGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGCGCTGGGCGTGATGTTGCTGGAGCgg                                >  2:2370233/1‑93 (MQ=255)

                                                           cGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCgg                                <  2:638615/93‑1 (MQ=255)

                                                            gTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGa                               <  1:1587460/93‑1 (MQ=255)

                                                            gTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGa                               >  1:4227079/1‑93 (MQ=255)

                                                                ggCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAg                           >  1:3483163/1‑93 (MQ=255)

                                                                ggCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAg                           >  1:2347548/1‑93 (MQ=255)

                                                                 gCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGc                          >  1:111073/1‑93 (MQ=255)

                                                                  cAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGcc                         <  1:3227444/93‑1 (MQ=255)

                                                                  cAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGcc                         <  2:3294789/93‑1 (MQ=255)

                                                                   aGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCg                        >  1:447214/1‑93 (MQ=255)

                                                                   aGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCg                        >  1:5236256/1‑93 (MQ=255)

                                                                     aTTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTa                      >  1:1476921/1‑93 (MQ=255)

                                                                         cTGCCACGTTGGCCAGCCGGCGCTTAGCGGGCAAGTTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAgt                  <  2:2500622/93‑1 (MQ=255)

                                                                          tGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAGATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAgtg                 <  1:4698361/93‑1 (MQ=255)

                                                                            ccgcGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGtgtt               <  2:2174228/90‑1 (MQ=255)

                                                                            ccACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGtgtt               <  1:3700053/93‑1 (MQ=255)

                                                                            ccACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGtgtt               <  2:4617711/93‑1 (MQ=255)

                                                                             cACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGtgttg              <  2:376794/93‑1 (MQ=255)

                                                                              aCGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGtgttgt             >  1:2940528/1‑93 (MQ=255)

                                                                              aCGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGtgttgt             >  1:840744/1‑93 (MQ=255)

                                                                               cGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTgttgtt            <  1:11593/93‑1 (MQ=255)

                                                                                gTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTc           >  2:5334010/1‑93 (MQ=255)

                                                                                gTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTc           <  2:891507/93‑1 (MQ=255)

                                                                                gTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTc           >  1:5521093/1‑93 (MQ=255)

                                                                                gTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTc           <  1:389986/93‑1 (MQ=255)

                                                                                 gtAGCCCGCTGACGCTTAGAGGGCAAATTCGTAAGGTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCa          <  1:2768042/92‑1 (MQ=255)

                                                                                    gccagccGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCAccc       >  1:658466/1‑93 (MQ=255)

                                                                                    gccagccGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCAccc       >  2:4782115/1‑93 (MQ=255)

                                                                                     ccagccGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCa      <  2:4218290/93‑1 (MQ=255)

                                                                                      cagccGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAg     <  2:5195119/93‑1 (MQ=255)

                                                                                      cagccGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAg     <  1:5137039/93‑1 (MQ=255)

                                                                                       agccGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAgg    <  2:4600409/93‑1 (MQ=255)

                                                                                       agccGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAgg    >  1:3384990/1‑93 (MQ=255)

                                                                                        gccGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGc   <  2:5291760/93‑1 (MQ=255)

                                                                                        gccGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGc   >  2:5058974/1‑93 (MQ=255)

TAATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCG  >  NC_000913/4156067‑4156248

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`