BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,184,644	A→G	T573A (ACT→GCT)	rpoC →	RNA polymerase beta prime subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,184,644	0	A	G	100.0%	860.8 / NA	238	T573A (ACT→GCT)	rpoC	RNA polymerase beta prime subunit
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (124/114); total (124/114)

Only 100 of 247 total aligned reads displayed.

TCTCTGCATGCGCGCGTTAAAGTGCGTATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGACTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAGGCGCTGGGTAAAAAAGCAATCTC  >  NC_000913/4184554‑4184732

   ctGCATGCGCGCGTTAAAGTGCGTATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGtt                                                                                     <  2:1309032/93‑1 (MQ=255)

    tGCATGCGCGCGTTAAAGTGCGTATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTg                                                                                    >  2:3720356/1‑93 (MQ=255)

     gCATGCGCGCGTTAAAGTGCGTATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTgg                                                                                   <  1:5869951/93‑1 (MQ=255)

     gCATGCGCGCGTTAAAGTGCGTATCACCGAGTATGAAAAAGATGCTAACGGGGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTgg                                                                                   >  2:2189052/1‑93 (MQ=255)

      cATGCGCGCGTTAAAGTGCGTATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGc                                                                                  >  2:4063042/1‑93 (MQ=255)

       aTGCGCGCGTTAAAGTGCGTATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGcc                                                                                 <  1:363620/93‑1 (MQ=255)

        tGCGCGCGTTAAAGTGCGTATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCg                                                                                >  1:732931/1‑93 (MQ=255)

        tGCGCGCGTTAAAGTGCGTATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCg                                                                                >  1:3835226/1‑93 (MQ=255)

        tGCGCGCGTTAAAGTGCGTATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCg                                                                                >  2:236878/1‑93 (MQ=255)

           gcgcgTTAAAGTGCGTATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGc                                                                             >  1:5533588/1‑93 (MQ=255)

                ttAAAGTGCGTATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTc                                                                        >  1:2434753/1‑93 (MQ=255)

                ttAAAGTGCGTATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTc                                                                        >  1:5902766/1‑93 (MQ=255)

                 tAAAGTGCGTATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCt                                                                       <  1:1741253/93‑1 (MQ=255)

                  aaaGTGCGTATCACCGAGTATGAAAAAGATGCTAACGGTGAAGTAGTAGCGAAAACCAGACTGAAAGACACGGCTGTTGGCCGTGGCCTTCtg                                                                      >  2:4578142/1‑93 (MQ=255)

                   aaGTGCGTATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCtgt                                                                     >  1:1078988/1‑93 (MQ=255)

                    aGTGCGTATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCtgtg                                                                    <  1:6019056/93‑1 (MQ=255)

                    aGTGCGTATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCtgtg                                                                    <  1:3105996/93‑1 (MQ=255)

                    aGTGCGTATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCtgtg                                                                    <  2:1408941/93‑1 (MQ=255)

                     gtccGTATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTgg                                                                   <  1:4204603/90‑1 (MQ=255)

                      tGCGTATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGga                                                                  <  2:2676702/93‑1 (MQ=255)

                      tGCGTATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGga                                                                  >  2:2685118/1‑93 (MQ=255)

                        ctaaTCACCGAGTATGAAAAAGATGCTAACGGTGAATCAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCGGTGCCATTCTGTGgatg                                                                <  1:3421205/90‑1 (MQ=255)

                         gTATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGgatga                                                               >  1:3774606/1‑93 (MQ=255)

                         gTATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGgatga                                                               >  2:1284397/1‑93 (MQ=255)

                         gTATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGgatga                                                               >  2:5242205/1‑93 (MQ=255)

                          tATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGgatgat                                                              <  1:843321/93‑1 (MQ=255)

                          tATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGgatgat                                                              <  1:4284988/93‑1 (MQ=255)

                           aTCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGAtt                                                             <  1:3460806/93‑1 (MQ=255)

                             cACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGt                                                           >  2:5365076/1‑93 (MQ=255)

                             cACCGAGGATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGt                                                           <  2:1467061/93‑1 (MQ=255)

                              aCCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTa                                                          <  2:4898596/93‑1 (MQ=255)

                              aCCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTa                                                          >  1:4424330/1‑93 (MQ=255)

                               ccGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTAc                                                         >  1:2968678/1‑93 (MQ=255)

                               ccGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTAc                                                         <  1:3135172/93‑1 (MQ=255)

                                cGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTAcc                                                        <  2:451329/93‑1 (MQ=255)

                                cGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTAcc                                                        >  1:2907665/1‑93 (MQ=255)

                                 gAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCg                                                       >  2:3513842/1‑93 (MQ=255)

                                    tATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGaaa                                                    >  2:679730/1‑93 (MQ=255)

                                    tATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGaaa                                                    <  1:1842495/93‑1 (MQ=255)

                                    tATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGaaa                                                    <  1:5977002/93‑1 (MQ=255)

                                    tATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGaaa                                                    >  2:3299100/1‑93 (MQ=255)

                                    tATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGaaa                                                    >  2:3155647/1‑93 (MQ=255)

                                     aTGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGGTGATGGTACCGAAAg                                                   >  2:1893804/1‑93 (MQ=255)

                                      tGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAgg                                                  >  2:4221439/1‑93 (MQ=255)

                                      tGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAgg                                                  >  1:2068796/1‑93 (MQ=255)

                                       gAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGt                                                 >  1:4055718/1‑93 (MQ=255)

                                       gAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGt                                                 <  1:3613823/93‑1 (MQ=255)

                                        aaaaaGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTc                                                <  1:1192160/93‑1 (MQ=255)

                                        aaaaaGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTc                                                <  1:3968859/93‑1 (MQ=255)

                                        aaaaaGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTc                                                >  1:1688464/1‑93 (MQ=255)

                                         aacaGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCt                                               <  1:5475691/90‑1 (MQ=255)

                                          aaaGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGAGGATGATTGTACCGAAAGGTCTg                                              >  1:3502366/1‑93 (MQ=255)

                                            aGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGcc                                            <  2:5686186/93‑1 (MQ=255)

                                              aTGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCtt                                          >  2:1681755/1‑93 (MQ=255)

                                                  tAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTc                                      <  2:3547052/93‑1 (MQ=255)

                                                  tAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTc                                      <  2:4516635/93‑1 (MQ=255)

                                                   aaCGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTcc                                     <  1:3344063/93‑1 (MQ=255)

                                                   aaCGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTcc                                     >  1:2836817/1‑93 (MQ=255)

                                                    aCGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCa                                    <  2:4208679/93‑1 (MQ=255)

                                                    aCGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCa                                    >  2:562434/1‑93 (MQ=255)

                                                     cGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCAt                                   >  1:5109842/1‑93 (MQ=255)

                                                      ggTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATc                                  <  2:4874597/93‑1 (MQ=255)

                                                      ggTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATc                                  >  2:99374/1‑93 (MQ=255)

                                                      ggTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATc                                  <  2:1067461/93‑1 (MQ=255)

                                                         gAATTAGTAGCGAAAACCAGCCGGAAAGACACGGCGGTTGGCCGTGCCAGCCTGAGGATGATGGGACCGAAAGGGCTGCCTCACTCCATCgcc                               >  2:4761635/1‑91 (MQ=255)

                                                          aaTTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCa                              >  2:3515334/1‑93 (MQ=255)

                                                           aTTAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCaa                             >  1:3014593/1‑93 (MQ=255)

                                                            ttAGTAGCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAAc                            <  1:4927509/93‑1 (MQ=255)

                                                             tagtagCGAAAACCAGCCTGAAAGACTCGGCTGTTGGCCTTGCCATTCTGTGTTTGTTTGTACCGAAAGGTCTGCCTTACTTTTTCGTCaatc                           >  1:4757556/1‑91 (MQ=255)

                                                             tagtagCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAAcc                           >  1:4855714/1‑93 (MQ=255)

                                                               gtagCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAg                         <  1:1221720/93‑1 (MQ=255)

                                                               gtagCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAg                         <  2:791315/93‑1 (MQ=255)

                                                               gtagCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAg                         >  1:669073/1‑93 (MQ=255)

                                                               gtagCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAg                         <  1:771762/93‑1 (MQ=255)

                                                                tagCGAAACCCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAgg                        <  2:3440124/93‑1 (MQ=255)

                                                                tagCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAgg                        >  2:3825096/1‑93 (MQ=255)

                                                                tagCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAAACAgg                        >  1:979651/1‑93 (MQ=255)

                                                                 agCGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAGgc                       <  1:877398/93‑1 (MQ=255)

                                                                   cGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAGgcgc                     <  2:5905214/93‑1 (MQ=255)

                                                                   cGAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAGgcgc                     <  1:261255/93‑1 (MQ=255)

                                                                    gAAAACCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAGGCGCt                    <  2:6064222/93‑1 (MQ=255)

                                                                     aaaaCCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAGGCGCTg                   <  1:5979957/93‑1 (MQ=255)

                                                                     aaaaCCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGGCTGCCTTACTCCATCGTCAACAAGGCGCTg                   >  1:533350/1‑93 (MQ=255)

                                                                      aaaCCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAGGCGCTgg                  <  2:1635028/93‑1 (MQ=255)

                                                                      aaaCCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAGGCGCTgg                  >  1:1445044/1‑93 (MQ=255)

                                                                       aaCCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTATGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAGGCGCTggg                 <  1:2287264/93‑1 (MQ=255)

                                                                        aCCAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAGGCGCTGGGt                <  1:5188416/93‑1 (MQ=255)

                                                                        aCCAGCCTGAAAGACACGGCTGTCGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAGGCGCTGGGt                >  2:2590910/1‑93 (MQ=255)

                                                                         ccAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAGGCGCTGGGTa               <  2:3641762/93‑1 (MQ=255)

                                                                          cAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCCGGCGCTGGGGaa              >  1:90343/1‑93 (MQ=255)

                                                                          cAGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAGGCGCTGGGTaa              <  1:5329050/93‑1 (MQ=255)

                                                                           aGCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAGGCGCTGGGTaaa             >  2:2851840/1‑93 (MQ=255)

                                                                            gCCTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAGGCGCTGGGTaaaa            >  1:4127875/1‑93 (MQ=255)

                                                                             ccTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAGGCGCTGGGTaaaaa           >  2:2996931/1‑93 (MQ=255)

                                                                              cTGAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAGGCGCTGGGTaaaaaa          <  1:3182767/93‑1 (MQ=255)

                                                                                gAAAGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAGGCGCTGGGTAAAAAAGc        >  2:5173500/1‑93 (MQ=255)

                                                                                 aaaGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAGGCGCTGGGTAAAAAAGCa       >  2:2499586/1‑93 (MQ=255)

                                                                                  aaGACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAGGCGCTGGGTAAAAAAGCaa      >  1:4419362/1‑93 (MQ=255)

                                                                                    gACACGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAGGCGCTGGGTAAAAAAGCAAtc    <  1:3781806/93‑1 (MQ=255)

                                                                                     acacGGCTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAGGCGCTGGGTAAAAAAGCAAtct   >  2:5649388/1‑93 (MQ=255)

TCTCTGCATGCGCGCGTTAAAGTGCGTATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGACTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAGGCGCTGGGTAAAAAAGCAATCTC  >  NC_000913/4184554‑4184732

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`