BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	693,605	C→T	G192S (GGC→AGC)	yleA ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	693,605	0	C	T	99.5%	723.5 / ‑4.7	194	G192S (GGC→AGC)	yleA	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (82/111); total (82/112)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.97e-01

Only 100 of 203 total aligned reads displayed.

GCAGATCGGCAAACGATCCGGTGGTGCCGTCGTAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCCCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGGTGTAAGGCACCACGCAGTAGG  >  NC_000913/693515‑693694

gcagATCGGCAAACGATCCGGTGGTGCCGTCGTAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCCCGCACGctct                                                                                         >  1:2300919/1‑93 (MQ=255)

gcagATCGGCAAACGATCCGGTGGTGCCGTCGTAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGctct                                                                                         >  2:1062598/1‑93 (MQ=255)

gcagATCGGCAAACGATCCGGTGGTGCCGTCGTAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGctct                                                                                         <  1:5310454/93‑1 (MQ=255)

gcagATCGGCAAACGATCCGGTGGTGCCGTCGTAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGctct                                                                                         >  2:202049/1‑93 (MQ=255)

   gATCGGCAAACGATCCGGTGGTGCCGTCGTAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAg                                                                                      <  2:3302619/93‑1 (MQ=255)

   gATCGGCAAACGATCCGGTGGTGCCGTCGTAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAg                                                                                      >  2:4581991/1‑93 (MQ=255)

         cAAACGATCCGGTGGTGCCGTCGTAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCaa                                                                                <  1:592429/93‑1 (MQ=255)

         cAAACGATCCGGTGGTGCCGTCGTAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCaa                                                                                <  1:3626128/93‑1 (MQ=255)

          aaaCGATCCGGTGGTGCCGTCGTAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAg                                                                               >  2:5758754/1‑93 (MQ=255)

           aaCGATCCGGTGGTGCCGTCGTAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGc                                                                              >  1:4411097/1‑93 (MQ=255)

           aaCGATCCGGTGGTGCCGTCGTAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGc                                                                              <  1:3847724/93‑1 (MQ=255)

            aCGATCCGGTGGTGCCGTCGTAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGTAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCt                                                                             >  2:3789577/1‑93 (MQ=255)

             cGATCCGGTGGTGCCGTCGTAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTg                                                                            <  1:3878729/93‑1 (MQ=255)

               aTCCGGTGGTGCCGTCGTAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTggg                                                                          <  2:4268363/93‑1 (MQ=255)

                tCCGGTGGTGCCGTCGTAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGc                                                                         >  2:5266154/1‑93 (MQ=255)

                 ccGGTGGTGCCGTCGTAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCa                                                                        >  2:1274647/1‑93 (MQ=255)

                  cGGTGGTGCCGTCGTAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCaa                                                                       >  2:4327048/1‑93 (MQ=255)

                     tggtgCCGTCGTAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAAtct                                                                    >  2:5006702/1‑93 (MQ=255)

                     tggtgCCGTCGTAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAAtct                                                                    >  1:3466294/1‑93 (MQ=255)

                       gtgCCGTCGTAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCa                                                                  >  1:5831262/1‑93 (MQ=255)

                       gtgCCGTCGTAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCa                                                                  <  2:1937459/93‑1 (MQ=255)

                         gCCGTCGTAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCaaa                                                                >  2:4051799/1‑93 (MQ=255)

                           cgtcgtAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACa                                                              <  2:4780483/93‑1 (MQ=255)

                            gtcgtAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAg                                                             >  2:5528680/1‑93 (MQ=255)

                            gtcgtAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAg                                                             >  2:3363879/1‑93 (MQ=255)

                             tcgtAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGa                                                            >  2:2707889/1‑93 (MQ=255)

                             tcgtAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGa                                                            <  1:3648945/93‑1 (MQ=255)

                             tcgtAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGa                                                            <  1:3913800/93‑1 (MQ=255)

                              cgtAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGaa                                                           <  2:4485072/93‑1 (MQ=255)

                              cgtAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGaa                                                           >  1:1215860/1‑93 (MQ=255)

                               ttAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAat                                                          <  1:2180052/92‑1 (MQ=255)

                               gtAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAat                                                          >  1:4501870/1‑93 (MQ=255)

                               gtAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAat                                                          >  1:1979992/1‑93 (MQ=255)

                                tAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAata                                                         <  2:3062026/93‑1 (MQ=255)

                                tAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAata                                                         >  1:5670575/1‑93 (MQ=255)

                                 aGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAatat                                                        <  2:253678/93‑1 (MQ=255)

                                  gTTTTCACCACGCTAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATAtc                                                       <  2:1558664/93‑1 (MQ=255)

                                  gTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATAtc                                                       <  1:2990772/93‑1 (MQ=255)

                                  gTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATAtc                                                       <  1:5889211/93‑1 (MQ=255)

                                   ttttCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATAtcg                                                      <  1:5805594/93‑1 (MQ=255)

                                     ttCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATAtcgtc                                                    <  1:5341433/93‑1 (MQ=255)

                                       caccacGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTcgg                                                  <  2:751367/93‑1 (MQ=255)

                                         ccacGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTcggac                                                <  1:32323/93‑1 (MQ=255)

                                          cacGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTcggacg                                               >  1:4949052/1‑93 (MQ=255)

                                           acGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTcggacgg                                              <  1:2475977/93‑1 (MQ=255)

                                            cGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTcggacgga                                             <  2:745135/93‑1 (MQ=255)

                                            cGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTcggacgga                                             <  2:1770703/93‑1 (MQ=255)

                                            cGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTcggacgga                                             >  2:5062607/1‑93 (MQ=255)

                                             gCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCggacggac                                            <  2:5595411/93‑1 (MQ=255)

                                             gCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCggacggac                                            <  1:2136863/93‑1 (MQ=255)

                                             gCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCggacggac                                            <  1:259158/93‑1 (MQ=255)

                                              ccAGGCGTTCACGTTCTGACCGAGCAGTTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGgacggacg                                           <  1:3097076/93‑1 (MQ=255)

                                                aGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGc                                         >  1:1119583/1‑93 (MQ=255)

                                                aGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGc                                         <  1:4193398/93‑1 (MQ=255)

                                                 ggCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCt                                        >  2:500197/1‑93 (MQ=255)

                                                 ggCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCt                                        >  2:5422474/1‑93 (MQ=255)

                                                 ggCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCt                                        >  2:2621175/1‑93 (MQ=255)

                                                   cGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTa                                      <  1:798024/93‑1 (MQ=255)

                                                     ttCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTAcc                                    >  2:2095504/1‑93 (MQ=255)

                                                     ttCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTAcc                                    >  1:5187082/1‑93 (MQ=255)

                                                     ttCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTAcc                                    >  1:1054743/1‑93 (MQ=255)

                                                      tCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGGGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACct                                   >  2:587664/1‑93 (MQ=255)

                                                      tCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACct                                   >  2:1650394/1‑93 (MQ=255)

                                                      tCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACct                                   >  2:673910/1‑93 (MQ=255)

                                                       cACGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACctc                                  >  2:359649/1‑93 (MQ=255)

                                                         cGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCtt                                <  2:6027705/93‑1 (MQ=255)

                                                         cGTTCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCtt                                <  1:3493207/93‑1 (MQ=255)

                                                           ttCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTca                              >  2:3824231/1‑93 (MQ=255)

                                                            tCTGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTcac                             >  1:442042/1‑93 (MQ=255)

                                                              tGACCGAGCAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTcacca                           <  1:3161307/93‑1 (MQ=255)

                                                                    aGCAGGTTGACTTCACGCACGCCCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGgtg                     <  1:5557684/93‑1 (MQ=255)

                                                                      cAGGTTGAGTTCACGCACGCTCTGAGCCGCAAGATGGGCAATCTCAAACAGAATATCGTCGGACGGAAGGCTTACCTCCTCACCACGGgtgtg                   >  1:1361864/1‑92 (MQ=255)

                                                                      cAGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGGTGTa                   >  1:1658165/1‑93 (MQ=255)

                                                                       aGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGGTGTaa                  <  2:5231126/93‑1 (MQ=255)

                                                                       aGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGGTGTaa                  <  1:3341740/93‑1 (MQ=255)

                                                                       aGGTTGACTTCACGCACGCTCTGAGCCGCAAGCTAGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGGTGTaa                  <  1:6130413/93‑1 (MQ=255)

                                                                        ggTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGGTGTAAg                 <  2:2936649/93‑1 (MQ=255)

                                                                        ggTTGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGGTGTAAg                 <  1:4078525/93‑1 (MQ=255)

                                                                         gTTGACTTCACGCACGCTCTGAGCCGCACGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCTCCACGGGTGTAAgg                >  1:946868/1‑93 (MQ=255)

                                                                          ttGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGGTGTAAGGc               >  2:5856729/1‑93 (MQ=255)

                                                                          ttGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGGTGTAAGGc               <  1:3621933/93‑1 (MQ=255)

                                                                           tGACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGGTGTAAGGca              <  1:4562405/93‑1 (MQ=255)

                                                                           tGACTTCACGCACGCTCGGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGGTGTAAGGca              <  1:5036821/93‑1 (MQ=255)

                                                                            gACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGGTGTAAGGcac             <  2:5662594/93‑1 (MQ=255)

                                                                            gACTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGGTGTAAGGcac             >  2:1010838/1‑93 (MQ=255)

                                                                             aCTTCACGCACGCTCTGAGCCGCAAGCTGGGCGATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGGTGTAAGGcacc            >  1:5157113/1‑93 (MQ=255)

                                                                              cTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGGTGTAAGGcacca           <  1:2354703/93‑1 (MQ=255)

                                                                              cTTCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGGTGTAAGGcacca           >  1:1855636/1‑93 (MQ=255)

                                                                               ttCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGGTGTAAGGcaccac          >  1:3782830/1‑93 (MQ=255)

                                                                               ttCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGGTGTAAGGcaccac          <  2:2831162/93‑1 (MQ=255)

                                                                               ttCACGCACGCTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGGTGTAAGGcaccac          <  2:2130934/93‑1 (MQ=255)

                                                                                  acgcacgcTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGGTGTAAGGCACCACGCa       <  1:2770119/93‑1 (MQ=255)

                                                                                    gcacgcTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGGTGTAAGGCACCACGCAGt     <  1:1894795/93‑1 (MQ=255)

                                                                                    gcacgcTCTGAGCCGCAAGCTGGGCAATCTAAAACAGAATATCGTCGGACGGACGGC‑TACCTCTTCACCACGGGTGTAAGGCACCACGCAGTa    <  1:4177460/93‑1 (MQ=255)

                                                                                     cacgcTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGGTGTAAGGCACCACGCAGTa    <  1:4872614/93‑1 (MQ=255)

                                                                                      acgcTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGGTGTAAGGCACCACGCAGTAg   >  2:3120583/1‑93 (MQ=255)

                                                                                       cgcTCTGATCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGTCGGCTTACCTCTTCACCACGGGTGTAAGGCACCACGCAGTAgg  <  1:634448/93‑1 (MQ=255)

                                                                                       cgcTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGGTGTAAGGCACCACGCAGTAgg  <  1:2025895/93‑1 (MQ=255)

                                                                                       cgcTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGGTGTAAGGCACCACGCAGTAgg  <  2:2805433/93‑1 (MQ=255)

                                                                                       cgcTCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGGTGTAAGGCACCACGCAGTAgg  <  2:1364024/93‑1 (MQ=255)

GCAGATCGGCAAACGATCCGGTGGTGCCGTCGTAGTTTTCACCACGCCAGGCGTTCACGTTCTGACCGAGCAGGTTGACTTCACGCACGCCCTGAGCCGCAAGCTGGGCAATCTCAAACAGAATATCGTCGGACGGACGGCTTACCTCTTCACCACGGGTGTAAGGCACCACGCAGTAGG  >  NC_000913/693515‑693694

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`