BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	778,625	T→C	R112R (CGT→CGC)	pal →	peptidoglycan‑associated lipoprotein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	778,625	0	T	C	100.0%	652.3 / NA	185	R112R (CGT→CGC)	pal	peptidoglycan‑associated lipoprotein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (93/92); total (93/92)

Only 100 of 192 total aligned reads displayed.

TGACTTCGCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGTGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTCTGCAGACCA  >  NC_000913/778535‑778714

tGACTTCGCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCgg                                                                                         >  2:413718/1‑93 (MQ=255)

tGACTTCGCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCgg                                                                                         >  1:4550636/1‑93 (MQ=255)

 gACTTCGCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGt                                                                                        >  2:2668498/1‑93 (MQ=255)

 gACTTCGCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGt                                                                                        >  1:4242834/1‑93 (MQ=255)

 gACTTCGCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGt                                                                                        >  1:4206776/1‑93 (MQ=255)

  aCTTCGCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTa                                                                                       <  1:5354697/93‑1 (MQ=255)

  aCTTCGCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTa                                                                                       >  2:4343479/1‑93 (MQ=255)

   cTTCGCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTAc                                                                                      <  2:4230264/93‑1 (MQ=255)

   cTTCGCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTAc                                                                                      <  1:389046/93‑1 (MQ=255)

     tCGCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTc                                                                                    <  2:3124749/93‑1 (MQ=255)

     tCGCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTc                                                                                    <  2:4716584/93‑1 (MQ=255)

      cGCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAAAGCGGTACTcc                                                                                   >  2:6142779/1‑93 (MQ=255)

       gCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCCACCCGTCTTACAAAGTCACCGTAGAAGGGCCCCCGGACGAACGCGGTACTACg                                                                                  >  2:5808255/1‑93 (MQ=255)

        cTCAAATGCTGGATGCACATGCAAACTTACTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCgg                                                                                 >  1:4906755/1‑93 (MQ=255)

         tCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGa                                                                                >  1:630642/1‑93 (MQ=255)

         tCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGa                                                                                >  2:5577255/1‑93 (MQ=255)

         tCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGa                                                                                >  1:5075150/1‑93 (MQ=255)

         tCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGa                                                                                >  1:973963/1‑93 (MQ=255)

         tCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCATAGAAGGTCACGCGGACAAACGCGGTACTCCGGa                                                                                <  1:910675/93‑1 (MQ=255)

          cAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGaa                                                                               >  1:3345836/1‑93 (MQ=255)

          cAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGaa                                                                               <  2:848179/93‑1 (MQ=255)

           aaaTGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAAt                                                                              >  1:5733283/1‑93 (MQ=255)

           aaaTGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAAt                                                                              >  1:567150/1‑93 (MQ=255)

           aaaTGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAAt                                                                              >  1:908034/1‑93 (MQ=255)

            aaTGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATa                                                                             >  1:2945469/1‑93 (MQ=255)

                cTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATacaac                                                                         >  1:3765032/1‑93 (MQ=255)

                cTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATacaac                                                                         <  2:3072399/93‑1 (MQ=255)

                 tGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGACGGTCACGCGGACGAAAGCGGTACTCCGGAATacaaat                                                                        >  2:1960241/1‑91 (MQ=255)

                 tGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATacaaca                                                                        >  2:4435559/1‑93 (MQ=255)

                    aTGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACAtct                                                                     <  1:5836057/93‑1 (MQ=255)

                    aTGCACATGCAAACTTCCTGCGTAGCAAACCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATacaacaacc                                                                     >  2:1386948/1‑90 (MQ=255)

                      gCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTcc                                                                   <  2:1048277/93‑1 (MQ=255)

                      gCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTcc                                                                   >  2:5614997/1‑93 (MQ=255)

                       cacaTGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTccc                                                                  <  2:2414720/93‑1 (MQ=255)

                          aTGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTgg                                                               >  2:5171549/1‑93 (MQ=255)

                           tGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTggg                                                              >  1:4728469/1‑93 (MQ=255)

                           tGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTggg                                                              >  1:815595/1‑93 (MQ=255)

                             cAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTg                                                            >  1:5313120/1‑93 (MQ=255)

                             cAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTg                                                            <  1:2396346/93‑1 (MQ=255)

                              aaaCTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGa                                                           >  2:1825330/1‑93 (MQ=255)

                                aCTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAAc                                                         >  2:2237344/1‑93 (MQ=255)

                                  ttCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAAcgt                                                       <  1:1845428/93‑1 (MQ=255)

                                  ttCCTGCCTAGCAACCCGTCTTACAAAATCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAAcgt                                                       <  1:1593638/93‑1 (MQ=255)

                                     cTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAAcgtcgt                                                    >  1:3175088/1‑93 (MQ=255)

                                     cTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAAcgtcgt                                                    <  1:2275615/93‑1 (MQ=255)

                                      tGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTg                                                   >  2:3780145/1‑93 (MQ=255)

                                       gCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGc                                                  <  2:718678/93‑1 (MQ=255)

                                         gTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGGACGTCGTGCGa                                                >  1:5180299/1‑93 (MQ=255)

                                          tAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGaa                                               >  2:1884278/1‑93 (MQ=255)

                                          tAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGaa                                               <  1:1181607/93‑1 (MQ=255)

                                          tAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGaa                                               <  2:2542101/93‑1 (MQ=255)

                                          tAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGaa                                               <  1:2020998/93‑1 (MQ=255)

                                            gCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACg                                             >  2:2905306/1‑93 (MQ=255)

                                              caCCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGcc                                           <  1:1472723/92‑1 (MQ=255)

                                              aaCCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGcc                                           >  2:1483770/1‑93 (MQ=255)

                                              aaCCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGCGCGAACGcc                                           >  2:239523/1‑93 (MQ=255)

                                               aCCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCg                                          >  1:3282101/1‑93 (MQ=255)

                                                cccGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGt                                         <  2:5445997/93‑1 (MQ=255)

                                                cccGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGt                                         <  2:2578239/93‑1 (MQ=255)

                                                cccGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGt                                         >  2:5978122/1‑93 (MQ=255)

                                                cccGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGt                                         >  2:3788985/1‑93 (MQ=255)

                                                 ccGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGtt                                        >  1:4986927/1‑93 (MQ=255)

                                                  cGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGNGNAACGTCGTGCGAACGCCGTTa                                       >  2:2350684/1‑93 (MQ=255)

                                                  cGTCTAACAAAGTCACAGTAAAAGGTCACGCAGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTa                                       <  2:4770684/93‑1 (MQ=255)

                                                   gTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTaa                                      >  2:5374253/1‑93 (MQ=255)

                                                     cTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGa                                    <  1:1104416/93‑1 (MQ=255)

                                                     cTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGa                                    <  2:2527542/93‑1 (MQ=255)

                                                      ttACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGAt                                   <  2:325706/93‑1 (MQ=255)

                                                        tcAAAGTCCCCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGt                                 <  1:4692773/92‑1 (MQ=255)

                                                        aCAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGt                                 >  1:4654854/1‑93 (MQ=255)

                                                         cAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTa                                >  2:1325198/1‑93 (MQ=255)

                                                          aaaGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTAc                               >  2:5076141/1‑93 (MQ=255)

                                                          aaaGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCACTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTAc                               <  1:52258/93‑1 (MQ=255)

                                                           aaGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTAcc                              >  2:3349385/1‑93 (MQ=255)

                                                           aaGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTAcc                              >  1:1377863/1‑93 (MQ=255)

                                                              tCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGc                           <  2:5737633/93‑1 (MQ=255)

                                                              tCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGc                           <  1:1547525/93‑1 (MQ=255)

                                                                 ccGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAgg                        <  2:5667460/93‑1 (MQ=255)

                                                                 ccGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAgg                        <  2:458272/93‑1 (MQ=255)

                                                                 ccGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAgg                        <  1:3508632/93‑1 (MQ=255)

                                                                  cGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAggg                       <  2:3538723/93‑1 (MQ=255)

                                                                  cGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAggg                       <  1:2217763/93‑1 (MQ=255)

                                                                    tAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTa                     >  1:2339161/1‑93 (MQ=255)

                                                                       aaGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAg                  <  1:5441300/93‑1 (MQ=255)

                                                                        aGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAgg                 <  2:1219499/93‑1 (MQ=255)

                                                                        aGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAgg                 <  2:884695/93‑1 (MQ=255)

                                                                         ggTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCTAACGCCGTTAAGATGTACCTGCAGGGTAAAGGc                >  2:2021443/1‑93 (MQ=255)

                                                                          gTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCg               <  1:5626992/93‑1 (MQ=255)

                                                                             aCGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGttt            >  1:4507239/1‑93 (MQ=255)

                                                                              cgcgGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTc           <  1:5260974/93‑1 (MQ=255)

                                                                              cgcgGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTc           <  1:5334660/93‑1 (MQ=255)

                                                                              cgcgGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTc           <  2:1695932/93‑1 (MQ=255)

                                                                                 ggACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTCTGc        <  1:4130675/93‑1 (MQ=255)

                                                                                 ggACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTCTGc        >  2:5822003/1‑93 (MQ=255)

                                                                                     gAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTCTGCAGAc    <  2:1121714/93‑1 (MQ=255)

                                                                                     gAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTCTGCAGAc    <  1:2691500/93‑1 (MQ=255)

                                                                                      aaCGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTCTGCAGAcc   <  2:3601725/93‑1 (MQ=255)

                                                                                      aaCGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTCTGCAGAcc   <  1:3675009/93‑1 (MQ=255)

                                                                                      aaCGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTCTGCAGAcc   >  2:84102/1‑93 (MQ=255)

                                                                                       aCGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTCTGCAGACCa  >  1:1106031/1‑93 (MQ=255)

TGACTTCGCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGTGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTCTGCAGACCA  >  NC_000913/778535‑778714

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`