BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	910,552	A→G	R274R (CGT→CGC)	b0872 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	910,552	0	A	G	99.4%	554.4 / ‑4.6	157	R274R (CGT→CGC)	b0872	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (77/79); total (78/79)
Fisher's exact test for biased strand distribution p-value = 4.97e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.79e-01

Only 100 of 168 total aligned reads displayed.

AGCGATTTCGGCGTCGGTCAGCGTCATTGTGCTGCTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCACGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCAACCGGGGCGTAAAATTCTCGTGCCGGTTG  >  NC_000913/910462‑910641

aGCGATTTCGGCGTCGGTCAGCGTCATTGTGCTGCTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCcgcgcg                                                                                         >  1:443970/1‑93 (MQ=255)

  cGATTTCGGCGTCGGTCAGCGTCATTGTGCTGCTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCggc                                                                                       <  1:1119425/93‑1 (MQ=255)

  cGATTTCGGCGTCGGTCAGCGTCATTGTGCTGCTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCggc                                                                                       >  1:1548938/1‑93 (MQ=255)

     tttCGGCGTCGGTCAGCGTCATTGTGCTGCTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCggcagg                                                                                    <  1:3063289/93‑1 (MQ=255)

       tCGGCGTCGGTCAGCGTCATTGTGCTGCTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCggcaggca                                                                                  <  2:1254766/93‑1 (MQ=255)

        cGGCGTCGGTCAGCGTCATTGTGCTGCTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGgcaggcag                                                                                 <  2:4173165/93‑1 (MQ=255)

         ggCGTCGGTCAGCGTCATTGTGCTGCTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGc                                                                                <  1:2282605/93‑1 (MQ=255)

            gTCGGTCAGCGTCATTGTGCTGCTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGAc                                                                             >  1:5767910/1‑93 (MQ=255)

             tCGGTCAGCGTCATTGTGCTGCTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACa                                                                            >  2:2426960/1‑93 (MQ=255)

             tCGGTCAGCGTCATTGTGCTGCTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACa                                                                            <  1:449696/93‑1 (MQ=255)

              cGGTCAGCGTCATTGTGCTGCTCACCCTATATTCACCGGAAACCACTGTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACaa                                                                           <  2:5246391/93‑1 (MQ=255)

               ggTCAGCGTCATTGTGCTGCTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAAc                                                                          <  1:3400504/93‑1 (MQ=255)

                 tCAGCGTCATTGTGCTGCTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCg                                                                        <  2:1013437/93‑1 (MQ=255)

                 tCAGCGTCATTGTGCTGCTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCg                                                                        >  1:1589085/1‑93 (MQ=255)

                    gCGTCATTGTGCTGCTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCCGGCAGCGACAACCGGaa                                                                     >  2:3297518/1‑93 (MQ=255)

                    gCGTCATTGTGCTGCTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGaa                                                                     <  2:4186730/93‑1 (MQ=255)

                     cGTCATTGTGCTGCTCCCCGTATATTCACCGGAAACAGCTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAAc                                                                    <  2:3935957/93‑1 (MQ=255)

                     cGTCATTGTGCTGCTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAAc                                                                    <  1:1222749/93‑1 (MQ=255)

                      gTCATTGTGCTGCTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACCACCGGAACg                                                                   >  2:4396196/1‑93 (MQ=255)

                      gTCATTGTGCTGCTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACg                                                                   >  2:2563428/1‑93 (MQ=255)

                       tCATTGTGCTGCTCACCGTATATTTACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGt                                                                  >  2:1569559/1‑93 (MQ=255)

                       tCATTGTGCTGCTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGt                                                                  >  2:5788173/1‑93 (MQ=255)

                       tCATTGTGCTGCTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGt                                                                  >  2:1312256/1‑93 (MQ=255)

                         aTTGTGCTGCTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTa                                                                <  2:3401267/93‑1 (MQ=255)

                         aTTGTGCTGCTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTa                                                                <  2:5276373/93‑1 (MQ=255)

                           tgtgCTGCTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTAtt                                                              <  1:4912566/93‑1 (MQ=255)

                            gtgCTGCTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTg                                                             <  2:3471476/93‑1 (MQ=255)

                             tgctgcTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGc                                                            <  2:5584035/93‑1 (MQ=255)

                             tgctgcTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGc                                                            <  1:4021334/93‑1 (MQ=255)

                               ctgctCGCCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCtt                                                          <  2:2378649/93‑1 (MQ=255)

                               ctgctCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCtt                                                          <  1:2990475/93‑1 (MQ=255)

                               ctgctCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCACGCAGCGACAACCGGAACGTTATTGCtt                                                          >  2:2720870/1‑93 (MQ=255)

                                tgctCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCttt                                                         <  1:2197457/93‑1 (MQ=255)

                                tgctCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCttt                                                         >  1:1374942/1‑93 (MQ=255)

                                 gctCACCGTATTTTCACCGGAAACCACTTTTGTCTTGCAGCAGCCGCAAACACCCGCGCGGCCGGCATCGACAACCGGAACGTTATTGCTTTc                                                        >  1:2104140/1‑93 (MQ=255)

                                 gctCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTc                                                        <  1:243216/93‑1 (MQ=255)

                                  ctCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTcc                                                       <  2:547805/93‑1 (MQ=255)

                                  ctCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTcc                                                       <  2:2978305/93‑1 (MQ=255)

                                   tCACCGTATATTCACCGGAACCCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCa                                                      <  1:719058/93‑1 (MQ=255)

                                   tCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCa                                                      <  2:1850388/93‑1 (MQ=255)

                                   tCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCa                                                      <  2:3450080/93‑1 (MQ=255)

                                    cACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGGAGCGACAACCGGAACGTTATTGCTTTCCAg                                                     >  1:5227158/1‑93 (MQ=255)

                                     aCCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCCAACACCCGCGCGGCAGGCCGCGACAACCGGAACGTTATTGCTTTCCAgc                                                    >  1:2016227/1‑93 (MQ=255)

                                      ccGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGACCGTTATTGCTTTCCAgcg                                                   >  1:2049932/1‑93 (MQ=255)

                                        gTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGcc                                                 >  2:5966003/1‑93 (MQ=255)

                                         tataTTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGTTTTCCAGCGCCt                                                >  2:1212736/1‑93 (MQ=255)

                                           tatTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTcc                                              >  2:3493822/1‑93 (MQ=255)

                                           tatTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTcc                                              <  1:3642125/93‑1 (MQ=255)

                                           tatTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTcc                                              >  1:5966374/1‑93 (MQ=255)

                                           tatTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTAATGCTTTCCAGCGCCTcc                                              >  1:3159993/1‑93 (MQ=255)

                                             ttCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAg                                            >  2:4014263/1‑93 (MQ=255)

                                             ttCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAg                                            >  1:5398020/1‑93 (MQ=255)

                                             ttCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAg                                            >  1:2192101/1‑93 (MQ=255)

                                             ttCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAg                                            >  2:3435548/1‑93 (MQ=255)

                                              tCACCGGAAACCCCTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGt                                           <  2:4796880/93‑1 (MQ=255)

                                              tCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGt                                           >  2:5883880/1‑93 (MQ=255)

                                               cACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTa                                          <  1:165475/93‑1 (MQ=255)

                                               cACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTa                                          <  1:1420149/93‑1 (MQ=255)

                                               cACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTa                                          <  2:3249963/93‑1 (MQ=255)

                                                aCCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAg                                         >  1:401789/1‑93 (MQ=255)

                                                 ccGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGc                                        >  2:4907864/1‑93 (MQ=255)

                                                   ggAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCgt                                      >  1:1087663/1‑93 (MQ=255)

                                                    gAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCgtg                                     <  1:420524/93‑1 (MQ=255)

                                                    gAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCgtg                                     <  2:5417786/93‑1 (MQ=255)

                                                     aaaCCACTTTTGTCTTACAGCAGCCGCAAACACCCGCACGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCgtgg                                    >  2:6018403/1‑93 (MQ=255)

                                                      aaCCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCgtggt                                   <  1:899301/93‑1 (MQ=255)

                                                      aaCCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCgtggt                                   <  2:3212581/93‑1 (MQ=255)

                                                      aaCCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCgtggt                                   <  2:1842901/93‑1 (MQ=255)

                                                       aCCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCgtggtg                                  <  1:2962997/93‑1 (MQ=255)

                                                       aCCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCgtggtg                                  <  1:2365685/93‑1 (MQ=255)

                                                       aCCACTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCgtggtg                                  >  2:773873/1‑93 (MQ=255)

                                                           cTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCaa                              >  2:5722495/1‑93 (MQ=255)

                                                           cTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCaa                              <  1:2660794/93‑1 (MQ=255)

                                                           cTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCaa                              <  1:1753648/93‑1 (MQ=255)

                                                           cTTTTGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGCGCCaa                              >  1:692040/1‑93 (MQ=255)

                                                             tttGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCAAcc                            >  2:4838856/1‑93 (MQ=255)

                                                               tGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCAACCgg                          >  1:1876612/1‑93 (MQ=255)

                                                               tGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCAACCgg                          <  2:3609287/93‑1 (MQ=255)

                                                               tGTCTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCAACCgg                          >  1:1821331/1‑93 (MQ=255)

                                                                 tCTTACANCAGCCGCAAACACNCGCGCGGCAGGCAGCTACAACCGGAACGTTATTTCTTTCCAGCGCCTCCAGTAGCGTGGTGCCAACCgggg                        <  2:3608102/93‑1 (MQ=255)

                                                                  cTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCAACCGGGGc                       >  2:2491981/1‑93 (MQ=255)

                                                                  cTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCAACCGGGGc                       <  2:1285837/93‑1 (MQ=255)

                                                                  cTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCAACCGGGGc                       >  1:680864/1‑93 (MQ=255)

                                                                  cTTACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCAACCGGGGc                       >  1:4051485/1‑93 (MQ=255)

                                                                   ttACAGCAGCCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCAACCGGGGCg                      >  2:3108435/1‑93 (MQ=255)

                                                                        gcagcCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCAACCGGGGCGTaaaa                 <  1:5851824/93‑1 (MQ=255)

                                                                        gcagcCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCAACCGGGGCGTaaaa                 <  1:4589708/93‑1 (MQ=255)

                                                                           gcCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCAACCGGGGCGTAAAATtc              >  1:2141911/1‑93 (MQ=255)

                                                                           gcCGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCAACCGGGGCGTAAAATtc              >  1:415479/1‑93 (MQ=255)

                                                                             cGCAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCAACCGGGGCGTAAAATtctc            >  2:6039468/1‑93 (MQ=255)

                                                                               cAAACACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCAACCGGGGCGTAAAATTCTCGt          <  1:5882770/93‑1 (MQ=255)

                                                                                 aaCACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCAACCGGGGCGTAAAATTCTCGTGc        >  2:5085812/1‑93 (MQ=255)

                                                                                 aaCACCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCAACCGGGGCGTAAAATTCTCGTGc        >  2:4587491/1‑93 (MQ=255)

                                                                                  acgcccGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCAACCGGGGCGTAAAATTCTCGTGcc       <  2:4374121/90‑1 (MQ=255)

                                                                                  acacCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCAACCGGGGCGTAAAATTCTCGTGcc       >  1:3357039/1‑93 (MQ=255)

                                                                                  acacCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCAACCGGGGCGTAAAATTCTCGTGcc       <  1:3348158/93‑1 (MQ=255)

                                                                                   cgcccGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCAACCGGGGCGTAAAATTCTCGTGCCg      <  2:1774272/91‑1 (MQ=255)

                                                                                    acCCGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCAACCGGGGCGTAAAATTCTCGTGCCgg     >  2:3125075/1‑93 (MQ=255)

                                                                                     cccGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCAACCGGGGCGTAAAATTCTCGTGCCGGt    >  1:3872510/1‑93 (MQ=255)

                                                                                     cccGCGCGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCAACCGGGGCGTAAAATTCTCGTGCCGGt    <  1:3707404/93‑1 (MQ=255)

AGCGATTTCGGCGTCGGTCAGCGTCATTGTGCTGCTCACCGTATATTCACCGGAAACCACTTTTGTCTTACAGCAGCCGCAAACACCCGCACGGCAGGCAGCGACAACCGGAACGTTATTGCTTTCCAGCGCCTCCAGTAGCGTGGTGCCAACCGGGGCGTAAAATTCTCGTGCCGGTTG  >  NC_000913/910462‑910641

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`