Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,237,202 A→G T137A (ACG→GCG)  dadA → D‑amino acid dehydrogenase subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,237,2020AG99.5% 710.6 / ‑4.5 202T137A (ACG→GCG) dadAD‑amino acid dehydrogenase subunit
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base G (97/104);  total (97/105)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.12e-01

Only 100 of 215 total aligned reads displayed.

GGATGGTGCGTCTGGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTACCGTATCAGCTG  >  NC_000913/1237113‑1237291
                                                                                         |                                                                                         
ggATGGTGCGTCTGGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGgcgc                                                                                        <  2:2214031/93‑1 (MQ=255)
ggATGGTGCGTCTGGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGACGc                                                                                        <  2:6099121/93‑1 (MQ=255)
   tGGTGCGTCTGGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGc                                                                                     <  2:2990531/93‑1 (MQ=255)
     gTGCGTCTGGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCaa                                                                                   <  1:4986533/93‑1 (MQ=255)
      tGCGTCTGGCGTAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAAc                                                                                  >  1:5724887/1‑93 (MQ=255)
      tGCGTCTGGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAAc                                                                                  <  2:536898/93‑1 (MQ=255)
           cTGGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTc                                                                             <  2:5154020/93‑1 (MQ=255)
            tGGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATGTTCAGTATGAAGGGCGTCAGGGTGGGGCTCTGCAACTGTTcc                                                                            <  2:3409996/93‑1 (MQ=255)
             ggCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCg                                                                           <  2:1357916/93‑1 (MQ=255)
             ggCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCg                                                                           >  1:1635720/1‑93 (MQ=255)
              gCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGt                                                                          <  1:2153299/93‑1 (MQ=255)
               cGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTa                                                                         <  2:5089674/93‑1 (MQ=255)
                 gAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTAcc                                                                       >  1:2602854/1‑93 (MQ=255)
                 gAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGAGTCAGGGTGGGGCGCTGCAACTGTTCCGTAcc                                                                       >  1:595288/1‑93 (MQ=255)
                  aaTACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCg                                                                      <  2:1901146/93‑1 (MQ=255)
                   aTACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGa                                                                     <  1:5627697/93‑1 (MQ=255)
                    tACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGaa                                                                    >  1:604347/1‑93 (MQ=255)
                     aCAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGaac                                                                   >  2:1626045/1‑93 (MQ=255)
                     aCAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGaac                                                                   <  2:2402462/93‑1 (MQ=255)
                     aCAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGaac                                                                   >  1:2559700/1‑93 (MQ=255)
                        gCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGTCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGaacaac                                                                >  2:4593223/1‑93 (MQ=255)
                        gCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGaacagc                                                                >  1:3037120/1‑91 (MQ=255)
                        gCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGaacaac                                                                >  2:1466063/1‑93 (MQ=255)
                        gCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGaacaac                                                                >  2:1980451/1‑93 (MQ=255)
                        gCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGaacaac                                                                >  1:4198227/1‑93 (MQ=255)
                         ccGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAacaaca                                                               <  1:2248784/93‑1 (MQ=255)
                          cGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAg                                                              >  2:3708394/1‑93 (MQ=255)
                           gTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGt                                                             >  2:5854579/1‑93 (MQ=255)
                            tGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTa                                                            <  2:2170329/93‑1 (MQ=255)
                            tGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTa                                                            <  2:4559165/93‑1 (MQ=255)
                             gATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTAt                                                           >  1:2825426/1‑93 (MQ=255)
                             gATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTAt                                                           <  1:4726112/93‑1 (MQ=255)
                             gATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTAt                                                           <  2:4703508/93‑1 (MQ=255)
                             gATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTAt                                                           >  2:39207/1‑93 (MQ=255)
                              aTTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGAATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATg                                                          >  1:3257860/1‑93 (MQ=255)
                               ttGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGa                                                         <  2:1661836/93‑1 (MQ=255)
                                tGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGaa                                                        <  1:1909572/93‑1 (MQ=255)
                                 gCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGaaa                                                       <  2:1395828/93‑1 (MQ=255)
                                 gCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGaaa                                                       >  2:5214032/1‑93 (MQ=255)
                                  ccTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGaaaa                                                      <  2:1747249/93‑1 (MQ=255)
                                  ccTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGaaaa                                                      <  2:3575684/93‑1 (MQ=255)
                                   cTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAAt                                                     >  1:4501625/1‑93 (MQ=255)
                                   cTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAAt                                                     >  1:1554942/1‑93 (MQ=255)
                                   cTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAAt                                                     >  2:2628605/1‑93 (MQ=255)
                                   cTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAAt                                                     <  1:636628/93‑1 (MQ=255)
                                    tGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATg                                                    >  2:4323179/1‑93 (MQ=255)
                                    tGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATg                                                    >  1:1719666/1‑93 (MQ=255)
                                    tGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATg                                                    >  1:5578381/1‑93 (MQ=255)
                                     gAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGc                                                   >  1:802094/1‑93 (MQ=255)
                                     gAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGc                                                   <  1:1518070/93‑1 (MQ=255)
                                      aaaGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCg                                                  >  1:523638/1‑93 (MQ=255)
                                        acaaTTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGAc                                                <  1:5450741/90‑1 (MQ=255)
                                        aGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGTCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGGACAACAGTATGAAGATGCGAc                                                >  1:1182259/1‑93 (MQ=255)
                                        aGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGAc                                                <  1:2381154/93‑1 (MQ=255)
                                        aGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGAc                                                <  2:3190415/93‑1 (MQ=255)
                                        aGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGAc                                                <  2:2433599/93‑1 (MQ=255)
                                         gCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGAcc                                               >  2:5449355/1‑93 (MQ=255)
                                          cATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGAccc                                              >  1:2465199/1‑93 (MQ=255)
                                            ttGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCcgc                                            <  2:5280374/93‑1 (MQ=255)
                                              gcgcgcCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGTGa                                          <  2:785380/93‑1 (MQ=255)
                                              gcgcgcCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGa                                          <  1:4051691/93‑1 (MQ=255)
                                              gcgcgcCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGa                                          <  2:5935982/93‑1 (MQ=255)
                                                 cgcCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGatat                                       >  2:3124373/1‑93 (MQ=255)
                                                  gcCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATc                                      >  1:4823254/1‑93 (MQ=255)
                                                  gcCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATc                                      <  1:1192415/93‑1 (MQ=255)
                                                    cGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGc                                    <  2:4251594/93‑1 (MQ=255)
                                                    cGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGc                                    <  1:5035038/93‑1 (MQ=255)
                                                    cGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGc                                    >  2:5421386/1‑93 (MQ=255)
                                                     gAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGcc                                   >  1:102665/1‑93 (MQ=255)
                                                       aaCCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAACATGCGACCCGCGATATCGCCgc                                 >  1:6115018/1‑92 (MQ=255)
                                                       aaCCAATATTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGt                                 <  1:3954596/93‑1 (MQ=255)
                                                             tatTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGa                           >  1:2910641/1‑93 (MQ=255)
                                                             tatTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGa                           >  1:2030830/1‑93 (MQ=255)
                                                             aatTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGa                           <  1:224677/92‑1 (MQ=255)
                                                              atTCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGaa                          <  2:4347000/93‑1 (MQ=255)
                                                              atTCAGTATGAAGAGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGaa                          >  2:4178300/1‑93 (MQ=255)
                                                                tCAGTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGa                        <  1:4084158/93‑1 (MQ=255)
                                                                   gTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGc                     >  2:4469154/1‑93 (MQ=255)
                                                                   gTATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGc                     <  2:4847951/93‑1 (MQ=255)
                                                                    tATGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGcc                    <  2:5534683/93‑1 (MQ=255)
                                                                     aTGAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCg                   <  1:1949271/93‑1 (MQ=255)
                                                                       gAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGc                 >  2:295574/1‑93 (MQ=255)
                                                                       gAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGc                 >  1:1534880/1‑93 (MQ=255)
                                                                       gAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGc                 <  2:1112303/93‑1 (MQ=255)
                                                                       gAAGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGc                 >  1:4520148/1‑93 (MQ=255)
                                                                        aaGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCTGCg                >  2:4785984/1‑93 (MQ=255)
                                                                         aGGGCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGt               <  2:90501/93‑1 (MQ=255)
                                                                          gggCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTa              >  1:1694824/1‑93 (MQ=255)
                                                                           ggCGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTAc             <  1:2894324/93‑1 (MQ=255)
                                                                             cGTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTACCg           <  1:5254801/93‑1 (MQ=255)
                                                                              gTCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTACCGt          <  2:1001632/93‑1 (MQ=255)
                                                                               tCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTACCGTa         >  2:1063024/1‑93 (MQ=255)
                                                                               tCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTACCGTa         >  1:3883440/1‑93 (MQ=255)
                                                                               tCAGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTACCGTa         >  2:738949/1‑93 (MQ=255)
                                                                                 aGGGTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTACCGTATc       >  2:4482213/1‑93 (MQ=255)
                                                                                  gggTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTACCGTATCa      >  2:3802447/1‑93 (MQ=255)
                                                                                  gggTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTACCGTATCa      <  1:4284971/93‑1 (MQ=255)
                                                                                  gggTGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTACCGTATCa      <  1:2767386/93‑1 (MQ=255)
                                                                                     tGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTACCGTATCAgct   <  2:1221263/93‑1 (MQ=255)
                                                                                     tGGGGCGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTACCGTATCAgct   >  1:3624910/1‑93 (MQ=255)
                                                                                         |                                                                                         
GGATGGTGCGTCTGGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTACCGTATCAGCTG  >  NC_000913/1237113‑1237291

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: