BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,322,824	T→C	S19P (TCT→CCT)	yciQ →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,322,824	0	T	C	99.1%	766.9 / ‑3.8	212	S19P (TCT→CCT)	yciQ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/2); new base C (96/114); total (96/116)
Fisher's exact test for biased strand distribution p-value = 5.02e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 228 total aligned reads displayed.

TTCTTATAACAAATTGCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCATCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCACTCTGCAACCAGATGGG  >  NC_000913/1322734‑1322913

ttCTTATAACAAATTGCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCAcct                                                                                         >  2:250385/1‑93 (MQ=255)

 tCTTATAACAAATTGCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCAcctc                                                                                        <  2:3100962/93‑1 (MQ=255)

  cTTATAACAAATTGCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACctct                                                                                       >  1:5825597/1‑93 (MQ=255)

   ttATAACAAATTGCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTa                                                                                      >  1:2132371/1‑93 (MQ=255)

    tataACAAATTGCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTaa                                                                                     <  1:1235171/93‑1 (MQ=255)

      taACAAATTGCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGt                                                                                   >  1:1016740/1‑93 (MQ=255)

      taACAAATTGCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGt                                                                                   >  1:3952164/1‑93 (MQ=255)

      taACAAATTGCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGt                                                                                   >  2:3687519/1‑93 (MQ=255)

        aCAAATTGCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTa                                                                                 <  2:1325244/93‑1 (MQ=255)

        aCAAATTGCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTa                                                                                 <  2:2327810/93‑1 (MQ=255)

        aCAAATTGCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTa                                                                                 <  2:464382/93‑1 (MQ=255)

         cAAATTGCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTAt                                                                                <  1:1563385/93‑1 (MQ=255)

         cAAATTGCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTAt                                                                                <  2:5336755/93‑1 (MQ=255)

         cAAATTGCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTAt                                                                                >  1:4964307/1‑93 (MQ=255)

         cAAAGTGCGTTCCACGGTTGGAAGATTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGAGAGCAGGGCTGTTTGTATCACCTCTAAGTTAt                                                                                <  1:5884522/93‑1 (MQ=255)

           aaTTGCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGc                                                                              >  1:3356787/1‑93 (MQ=255)

           aaTTGCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGc                                                                              >  2:4857745/1‑93 (MQ=255)

             ttGCGTTCCACGGATGGAAGACTATGGCAGGGAAGATTCGGTGCGTTTTGCTGTTGATAGCCGGACTGTTTGTATCATTTCTAAGTTATggta                                                                            >  2:2122465/1‑90 (MQ=255)

              tGCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGa                                                                           >  1:2945254/1‑93 (MQ=255)

              tGCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGa                                                                           >  1:844060/1‑93 (MQ=255)

              tGCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGa                                                                           >  1:1909402/1‑93 (MQ=255)

              tGCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGa                                                                           <  1:5346897/93‑1 (MQ=255)

               gCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCCGGGCTGTTTGTATCACCTCTAAGTTATGCAGaa                                                                          >  2:2169530/1‑93 (MQ=255)

               gCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGaa                                                                          <  2:3890890/93‑1 (MQ=255)

                   tCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAaca                                                                      <  2:4708515/93‑1 (MQ=255)

                   tCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAaca                                                                      <  2:5789247/93‑1 (MQ=255)

                    ccACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAacac                                                                     <  2:2450306/93‑1 (MQ=255)

                     cACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACg                                                                    <  2:4476695/93‑1 (MQ=255)

                     cACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACg                                                                    <  2:2008721/93‑1 (MQ=255)

                     cACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACg                                                                    >  2:2658745/1‑93 (MQ=255)

                      aCGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACgg                                                                   >  1:3430487/1‑93 (MQ=255)

                       cGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGga                                                                  >  2:4697146/1‑93 (MQ=255)

                        ggATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGgag                                                                 >  2:3546120/1‑93 (MQ=255)

                         gATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGgaga                                                                >  1:2352924/1‑93 (MQ=255)

                         gATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGgaga                                                                <  1:4780093/93‑1 (MQ=255)

                            ggAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATcc                                                             >  1:1971383/1‑93 (MQ=255)

                              aaGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCct                                                           >  2:447042/1‑93 (MQ=255)

                                gACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCcttc                                                         <  2:5820522/93‑1 (MQ=255)

                                gACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCcttc                                                         <  1:3217249/93‑1 (MQ=255)

                                 aCTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCcttct                                                        >  1:4186042/1‑93 (MQ=255)

                                 aCTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCcttct                                                        >  2:3425945/1‑93 (MQ=255)

                                   tATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTa                                                      <  1:1642791/93‑1 (MQ=255)

                                     tGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATg                                                    >  2:5638619/1‑93 (MQ=255)

                                     tGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATg                                                    <  2:4741947/93‑1 (MQ=255)

                                     tGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATg                                                    <  1:3651877/93‑1 (MQ=255)

                                       gCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATgaa                                                  <  1:3157868/93‑1 (MQ=255)

                                         aGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATgaaga                                                <  2:267614/93‑1 (MQ=255)

                                          gggAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATgaagaa                                               >  1:3338435/1‑93 (MQ=255)

                                           ggAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCATCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGaagaag                                              <  1:5133151/93‑1 (MQ=255)

                                           ggAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGaagaag                                              <  2:1454418/93‑1 (MQ=255)

                                           ggAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGaagaag                                              <  1:3789260/93‑1 (MQ=255)

                                            gAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAgg                                             <  2:3279006/93‑1 (MQ=255)

                                             aaGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAggg                                            <  2:4321490/93‑1 (MQ=255)

                                              aGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGa                                           <  2:1861331/93‑1 (MQ=255)

                                              aGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGa                                           >  2:1942487/1‑93 (MQ=255)

                                              aGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGa                                           <  1:1049413/93‑1 (MQ=255)

                                               gTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGAt                                          <  2:657503/93‑1 (MQ=255)

                                                tttCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGAtc                                         <  2:1013667/93‑1 (MQ=255)

                                                tttCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGAtc                                         <  2:5088165/93‑1 (MQ=255)

                                                  tCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGAtctc                                       >  2:4793675/1‑93 (MQ=255)

                                                  tCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGAtctc                                       <  1:5749342/93‑1 (MQ=255)

                                                  tCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGAtctc                                       >  2:3957013/1‑93 (MQ=255)

                                                     cTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGct                                    <  1:4250233/93‑1 (MQ=255)

                                                      tGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGctc                                   <  2:1294531/93‑1 (MQ=255)

                                                      tGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGctc                                   >  1:4347040/1‑93 (MQ=255)

                                                         aTTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCttg                                >  2:3375945/1‑92 (MQ=255)

                                                         aTTTTGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTAATGAAGAAGGGATCTCGCTCttt                                >  1:3483237/1‑93 (MQ=255)

                                                          ttttGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTg                               >  2:2906920/1‑93 (MQ=255)

                                                          ttttGCTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTg                               >  2:6028642/1‑93 (MQ=255)

                                                               cTGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGACCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGtt                          <  1:2453995/93‑1 (MQ=255)

                                                                tGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTg                         >  1:4380628/1‑93 (MQ=255)

                                                                tGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTg                         >  1:1877558/1‑93 (MQ=255)

                                                                tGTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTg                         >  1:4623712/1‑93 (MQ=255)

                                                                 gTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGa                        >  2:1828562/1‑93 (MQ=255)

                                                                 gTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGa                        >  1:2860116/1‑93 (MQ=255)

                                                                 gTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGa                        <  1:490919/93‑1 (MQ=255)

                                                                 gTTGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGa                        <  1:1315052/93‑1 (MQ=255)

                                                                   tGATAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAg                      >  2:900544/1‑93 (MQ=255)

                                                                      tAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCa                   <  1:5513772/93‑1 (MQ=255)

                                                                      tAGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCa                   <  1:4471753/93‑1 (MQ=255)

                                                                       aGCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCAc                  <  2:5882158/93‑1 (MQ=255)

                                                                        gCAGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCAct                 >  2:3641369/1‑93 (MQ=255)

                                                                          aGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCActct               <  1:1388083/93‑1 (MQ=255)

                                                                          aGGGCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCActct               <  2:4817867/93‑1 (MQ=255)

                                                                           gggCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCACTCTg              >  1:3680553/1‑93 (MQ=255)

                                                                            ggCTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCACTCTGc             <  2:5212398/93‑1 (MQ=255)

                                                                              cTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCACTCTGCaa           >  2:943799/1‑93 (MQ=255)

                                                                              cTGTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCACTCTGCaa           <  2:2785526/93‑1 (MQ=255)

                                                                                gTTTGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCACTCTGCAAcc         >  1:3611153/1‑93 (MQ=255)

                                                                                 tttGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCACTCTGCAACCa        >  1:2340656/1‑93 (MQ=255)

                                                                                 tttGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCACTCTGCAACCa        >  2:3775862/1‑93 (MQ=255)

                                                                                 tttGTATCACCTCTAAGTTATGCAGAAAACACGAAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCACTCTGCAACCa        >  1:112042/1‑93 (MQ=255)

                                                                                  ttGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCACTCTGCAACCAg       >  1:4239975/1‑93 (MQ=255)

                                                                                   tGTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCACTCTGCAACCAGa      >  2:1190010/1‑93 (MQ=255)

                                                                                    gTATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCACTCTGCAACCAGAt     <  1:3257539/93‑1 (MQ=255)

                                                                                     tATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCACTCTGCAACCAGATg    <  2:3473528/93‑1 (MQ=255)

                                                                                     tATCACCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCACTCTGCAACCAGATg    <  2:1642057/93‑1 (MQ=255)

                                                                                     gatcaccTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGTTCTTTGATGTTGAAGCCACTCTGCAACCAGATg    <  1:6016390/92‑1 (MQ=255)

                                                                                      atcaccTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCACTCTGCAACCAGATgg   <  2:4068446/93‑1 (MQ=255)

                                                                                      atcaccTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCACTCTGCAACCAGATgg   <  1:5659035/93‑1 (MQ=255)

TTCTTATAACAAATTGCGTTCCACGGATGGAAGACTATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCATCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCACTCTGCAACCAGATGGG  >  NC_000913/1322734‑1322913

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`