Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,678,790 T→C S404P (TCT→CCT)  b1605 → putative arginine/ornithine antiporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,678,7900TC98.5% 684.4 / ‑2.5 197S404P (TCT→CCT) b1605putative arginine/ornithine antiporter
Reads supporting (aligned to +/- strand):  ref base T (2/1);  new base C (95/98);  total (97/100)
Fisher's exact test for biased strand distribution p-value = 6.19e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01

Only 100 of 202 total aligned reads displayed.

GGCGCGTTCTTGCTGAAAATCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCTCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTACGCGCGCAAAACGCATACCCATGAT  >  NC_000913/1678700‑1678879
                                                                                          |                                                                                         
ggCGCGTTCTTGCTGAAAATCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCccct                                                                                         <  2:1477446/93‑1 (MQ=255)
 gcgcGTTCTTGCTGAAAATCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTg                                                                                        <  1:3049970/93‑1 (MQ=255)
  cgcgTTCTTGCTGAAAATCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTgg                                                                                       >  2:4826172/1‑93 (MQ=255)
   gcgTTCTTGCTGAAAATCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGt                                                                                      <  2:5399183/93‑1 (MQ=255)
   gcgTTCTTGCTGAAAATCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGt                                                                                      <  2:4227978/93‑1 (MQ=255)
    cgTTCTTGCTGAAAATCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTc                                                                                     >  1:4396891/1‑93 (MQ=255)
    cgTTCTTGCTGAAAATCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTc                                                                                     <  2:3081978/93‑1 (MQ=255)
      ttCTTGCTGAAAATCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCa                                                                                   >  2:2466371/1‑93 (MQ=255)
      ttCTTGCTGAAAATCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCa                                                                                   >  1:5506774/1‑93 (MQ=255)
      ttCTTGCTGAAAATCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCa                                                                                   >  2:5788948/1‑93 (MQ=255)
      ttCTTGCTGAAAATCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCa                                                                                   >  1:2475492/1‑93 (MQ=255)
      ttCTTGCTGAAAATCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCa                                                                                   >  1:2814927/1‑93 (MQ=255)
       tCTTGCTGAAAATCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCaa                                                                                  >  2:2280564/1‑93 (MQ=255)
       tCTTGCTGAAAATCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCaa                                                                                  >  1:4989353/1‑93 (MQ=255)
       tCTTGCTGAAAATCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCaa                                                                                  <  1:4582045/93‑1 (MQ=255)
       tCTTGCTGAAAATCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCaa                                                                                  <  2:2775352/93‑1 (MQ=255)
       tCTTGCTGAAAATCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCaa                                                                                  <  1:1150241/93‑1 (MQ=255)
        cTTGCTGAAAATCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAAt                                                                                 <  2:4882517/93‑1 (MQ=255)
        cTTGCTGAAAATCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAAt                                                                                 >  2:3037259/1‑93 (MQ=255)
         ttGCTGAAAATCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATg                                                                                >  1:1709371/1‑93 (MQ=255)
          tGCTGAAAATCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGCCCAATGc                                                                               >  2:4417082/1‑93 (MQ=255)
           gCTGAAAATCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGcc                                                                              >  2:2378095/1‑92 (MQ=255)
                aaaTCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGc                                                                         <  1:2070058/93‑1 (MQ=255)
                 aaTCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCt                                                                        <  2:767753/93‑1 (MQ=255)
                 aaTCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCt                                                                        <  1:5602386/93‑1 (MQ=255)
                   tCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGt                                                                      <  1:2555179/93‑1 (MQ=255)
                     gCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTa                                                                    <  1:3423197/93‑1 (MQ=255)
                     gCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTGATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTa                                                                    <  2:2699606/93‑1 (MQ=255)
                       aaCCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATc                                                                  <  2:3679263/93‑1 (MQ=255)
                        aCCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATcc                                                                 >  2:2200290/1‑93 (MQ=255)
                         cccGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCg                                                                >  1:5221324/1‑93 (MQ=255)
                         cccGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCg                                                                >  1:4050689/1‑93 (MQ=255)
                          ccGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCgt                                                               >  1:2634876/1‑93 (MQ=255)
                          ccGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCgt                                                               <  2:3587230/93‑1 (MQ=255)
                           cGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCgtt                                                              <  1:4411950/93‑1 (MQ=255)
                           cGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCgtt                                                              <  2:2952664/93‑1 (MQ=255)
                           cGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCgtt                                                              >  1:3788966/1‑93 (MQ=255)
                            gTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCgttg                                                             <  1:5592453/93‑1 (MQ=255)
                             tCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCgttgt                                                            <  2:1304226/93‑1 (MQ=255)
                             tCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCgttgt                                                            >  2:1925335/1‑93 (MQ=255)
                              ccACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCgttgtt                                                           >  2:5169986/1‑93 (MQ=255)
                               cACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTc                                                          <  1:1262506/93‑1 (MQ=255)
                               cACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTc                                                          <  1:952985/93‑1 (MQ=255)
                                aCTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCt                                                         >  1:490711/1‑93 (MQ=255)
                                aCTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCt                                                         >  1:5778678/1‑93 (MQ=255)
                                 cTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTg                                                        <  1:1590748/93‑1 (MQ=255)
                                   gCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTa                                                      <  1:2124494/93‑1 (MQ=255)
                                    cATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTAt                                                     <  1:4665296/93‑1 (MQ=255)
                                     aTAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATg                                                    >  2:2881966/1‑93 (MQ=255)
                                      tAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGc                                                   <  2:478058/93‑1 (MQ=255)
                                       aaaGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCa                                                  <  1:2585547/93‑1 (MQ=255)
                                            ggTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCggg                                             <  1:5678231/93‑1 (MQ=255)
                                              tAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGgc                                           <  2:4696922/93‑1 (MQ=255)
                                               aGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGgct                                          <  1:2380949/93‑1 (MQ=255)
                                               aGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGGTTTCCGTTGTTCTGTATGCACCGGGgct                                          >  1:5073403/1‑93 (MQ=255)
                                               aGGTGTCGGTGCCTGCATTTATGGCTTATGGGTATTTGACGCCCCTGGTCCAATGCACTTGCTGTTATTCGTTGTTCTGTATGCACCGGGgct                                          >  1:5299565/1‑93 (MQ=255)
                                                 gtgtCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGgctgc                                        <  1:3614911/93‑1 (MQ=255)
                                                  tgtCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGgctgct                                       <  2:2626110/93‑1 (MQ=255)
                                                    tCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCTCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTgg                                     >  1:4110300/1‑93 (MQ=255)
                                                    tCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCACTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTgg                                     <  2:4544585/93‑1 (MQ=255)
                                                      ggTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGtt                                   <  2:4072274/93‑1 (MQ=255)
                                                      ggTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGtt                                   >  1:2719706/1‑93 (MQ=255)
                                                       gTGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGttt                                  >  2:613083/1‑93 (MQ=255)
                                                        tGCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGtttt                                 >  2:1084523/1‑93 (MQ=255)
                                                         gCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTc                                >  2:1225076/1‑93 (MQ=255)
                                                         gCCTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTc                                >  2:179283/1‑93 (MQ=255)
                                                          ccTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTcc                               <  1:1941542/93‑1 (MQ=255)
                                                          ccTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTcc                               >  2:3336794/1‑93 (MQ=255)
                                                          ccTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGCTTTcc                               >  2:4206555/1‑93 (MQ=255)
                                                           cTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCt                              <  1:3907139/93‑1 (MQ=255)
                                                           cTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCt                              <  1:3852804/93‑1 (MQ=255)
                                                           cTGCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCt                              <  1:587498/93‑1 (MQ=255)
                                                             gCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGt                            >  2:4388397/1‑93 (MQ=255)
                                                             gCATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGt                            <  2:1636638/93‑1 (MQ=255)
                                                              cATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTa                           <  2:6039850/93‑1 (MQ=255)
                                                              cATTTATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTa                           <  1:967408/93‑1 (MQ=255)
                                                                tttATGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTAcg                         <  1:1875861/93‑1 (MQ=255)
                                                                    tGGCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTAcgcgcg                     >  2:2240415/1‑93 (MQ=255)
                                                                     ggCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTACgcgcgc                    >  1:3526620/1‑93 (MQ=255)
                                                                     ggCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTACgcgcgc                    <  2:593140/93‑1 (MQ=255)
                                                                      gCTTATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTACGCGCGCa                   >  1:1090753/1‑93 (MQ=255)
                                                                        ttATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTACGCGCGCaaa                 >  2:1617983/1‑93 (MQ=255)
                                                                         tATGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTACGCGCGCaaaa                >  2:3661535/1‑93 (MQ=255)
                                                                          aTGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTACGCGCGCAAAAc               <  1:772265/93‑1 (MQ=255)
                                                                           tGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTACGCGCGCAAAACg              >  1:6043109/1‑93 (MQ=255)
                                                                           tGGTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTACGCGCGCAAAACg              <  1:2406832/93‑1 (MQ=255)
                                                                             gTTATTGTACGCCTCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTACGCGCGGAAAACGCa            >  1:5619237/1‑93 (MQ=255)
                                                                             gTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTACGCGCGCAAAACGCa            >  1:3881466/1‑93 (MQ=255)
                                                                             gTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTACGCGCGCAAAACGCa            >  1:2193477/1‑93 (MQ=255)
                                                                             gTTATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTACGCGCGCAAAACGCa            >  2:834825/1‑93 (MQ=255)
                                                                              ttATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTACGCGCGCAAAACGCAt           <  1:59516/93‑1 (MQ=255)
                                                                              ttATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTACGCGCGCAAAACGCAt           <  2:5064475/93‑1 (MQ=255)
                                                                               tATTGTACGCCCCTGGTCCAGTGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTACGCGCGCAAAACGCATa          <  1:1008824/93‑1 (MQ=255)
                                                                               tATTGTACGCCCCTGGTCCAATGCACTTGTTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTACGCGCGCAAAACGCATa          >  2:728351/1‑93 (MQ=255)
                                                                               tATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTACGCGCGCAAAACGCATa          <  2:3704799/93‑1 (MQ=255)
                                                                               tATTGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTACGCGCGCAAAACGCATa          >  1:5378521/1‑93 (MQ=255)
                                                                                 ttGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTACGCGCGCAAAACGCATAcc        <  1:5053672/93‑1 (MQ=255)
                                                                                  tGTACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTACGCGCGCAAAACGCATAccc       >  2:4705828/1‑93 (MQ=255)
                                                                                    tACGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTACGCGCGCAAAACGCATACCCAt     >  1:484103/1‑93 (MQ=255)
                                                                                      cGCCCCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTACGCGCGCAAAACGCATACCCATGa   >  1:3428479/1‑93 (MQ=255)
                                                                                          |                                                                                         
GGCGCGTTCTTGCTGAAAATCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCTCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTACGCGCGCAAAACGCATACCCATGAT  >  NC_000913/1678700‑1678879

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: