BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,118,886	T→C	T231A (ACC→GCC)	wcaJ ←	putative colanic acid biosynthsis UDP‑glucose lipid carrier transferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,118,886	0	T	C	100.0%	567.9 / NA	160	T231A (ACC→GCC)	wcaJ	putative colanic acid biosynthsis UDP‑glucose lipid carrier transferase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (82/78); total (82/78)

Only 100 of 177 total aligned reads displayed.

GCGGCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGTGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCCCGCTTT  >  NC_000913/2118796‑2118976

   gCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGgtgt                                                                                       >  1:5742380/1‑93 (MQ=255)

    caccacCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTc                                                                                      <  1:3927913/93‑1 (MQ=255)

      ccaccGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCATCAGCCCCGAACAGGCGGTGGCCg                                                                                    >  1:4485924/1‑93 (MQ=255)

      ccaccGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCg                                                                                    >  2:5768330/1‑93 (MQ=255)

        accGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGcc                                                                                  >  1:3252632/1‑93 (MQ=255)

         ccGGTGCGCCGTGCATCTGTTCGAGGCGTGACTGGACAATGTTGAAGGTAAAGACGGCGGAGATCAGCAGCACCGAACAGGCGGTGTCCGCCa                                                                                 <  1:125802/93‑1 (MQ=255)

         ccGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGCCGGGGGTCAGCAGCACCGAACAGACGGGGTCCGCCa                                                                                 >  1:4549585/1‑93 (MQ=255)

          cGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAg                                                                                <  2:2721768/93‑1 (MQ=255)

           ggTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGt                                                                               <  2:1707918/93‑1 (MQ=255)

           ggTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGt                                                                               <  2:3291705/93‑1 (MQ=255)

           ggTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGt                                                                               <  2:3133557/93‑1 (MQ=255)

              aCGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGa                                                                            <  1:4432080/93‑1 (MQ=255)

              aCGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGa                                                                            >  2:5066610/1‑93 (MQ=255)

               cGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGAt                                                                           <  2:5719854/93‑1 (MQ=255)

                 ccGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATgg                                                                         <  1:3423810/93‑1 (MQ=255)

                   gTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGAc                                                                       >  2:452524/1‑93 (MQ=255)

                    ttCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGAcc                                                                      >  1:1372627/1‑93 (MQ=255)

                    ttCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGAcc                                                                      >  1:64852/1‑93 (MQ=255)

                     tCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCa                                                                     <  1:2326865/93‑1 (MQ=255)

                     tCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCa                                                                     >  1:1772417/1‑93 (MQ=255)

                     tCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCa                                                                     <  2:3987783/93‑1 (MQ=255)

                        tctcTTCGAGGCGTGAATGGAGAATGTTGAAGGTAACGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGCCCAGtt                                                                  >  1:4302607/1‑93 (MQ=255)

                        tctcTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGtt                                                                  >  1:4246607/1‑93 (MQ=255)

                        tctcTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGtt                                                                  >  1:234968/1‑93 (MQ=255)

                         ctctTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGttt                                                                 <  1:945825/93‑1 (MQ=255)

                          tctTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGtttt                                                                >  1:3029969/1‑93 (MQ=255)

                              cGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCa                                                            <  2:6085897/93‑1 (MQ=255)

                              cGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCa                                                            <  1:5780303/93‑1 (MQ=255)

                              cGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCCCCAGTTGGTGCACGTGTTTTTTct                                                            >  1:1241659/1‑92 (MQ=255)

                               gAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCAc                                                           >  1:2237010/1‑93 (MQ=255)

                               gAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCAc                                                           <  1:1546865/93‑1 (MQ=255)

                                 ggCGTGAATGGAGAATGTTGAGGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTc                                                         <  2:4428563/93‑1 (MQ=255)

                                 ggCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTc                                                         >  2:5159702/1‑93 (MQ=255)

                                   cGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTcgc                                                       <  1:3274358/93‑1 (MQ=255)

                                    gTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTcgcg                                                      >  2:548505/1‑93 (MQ=255)

                                    gTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTcgcg                                                      <  1:105929/93‑1 (MQ=255)

                                     tGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTcgcgc                                                     >  1:2835594/1‑93 (MQ=255)

                                      gAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTcgcgcg                                                    >  1:5053939/1‑93 (MQ=255)

                                       aaTGGAGAATGTTGCAGGTAAAGACGTCGGGGATCAGCAGCACGGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCGCTCgggcgc                                                   >  2:758982/1‑93 (MQ=255)

                                        aTGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGcc                                                  >  2:3656056/1‑93 (MQ=255)

                                         tGGAGAATGTTGAAGGTAAAGACGTCGGGGGTCAGCAGGACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTGTTTTCAGTCGTGCGCCg                                                 >  2:1370472/1‑93 (MQ=255)

                                         tGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCg                                                 >  1:4688751/1‑93 (MQ=255)

                                           gagaATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTc                                               <  1:4931080/93‑1 (MQ=255)

                                           gagaATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGGGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTc                                               >  2:4905886/1‑93 (MQ=255)

                                             gaATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCga                                             >  1:1891602/1‑92 (MQ=255)

                                             gaATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGc                                             >  1:5242880/1‑93 (MQ=255)

                                              aaTGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGca                                            >  2:2774965/1‑93 (MQ=255)

                                              aaTGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGca                                            >  2:926063/1‑93 (MQ=255)

                                               aTGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGcac                                           >  1:5649734/1‑93 (MQ=255)

                                                tGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTGCGCCAGTTGATGGACCAGTTTTTTGAATCGCGCGCCGTCGcact                                          >  1:2720435/1‑92 (MQ=255)

                                                tGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGcaca                                          <  2:2072377/93‑1 (MQ=255)

                                                 gTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACAt                                         <  2:5515244/93‑1 (MQ=255)

                                                 gTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACAt                                         >  2:4320327/1‑93 (MQ=255)

                                                 gTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACAt                                         >  2:3468447/1‑93 (MQ=255)

                                                  ttGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACAtt                                        <  1:915478/93‑1 (MQ=255)

                                                   tGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACAttt                                       <  1:3112932/93‑1 (MQ=255)

                                                     aaGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGc                                     >  1:3290150/1‑93 (MQ=255)

                                                      atgTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCa                                    <  1:3754138/91‑1 (MQ=255)

                                                      aGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCa                                    >  2:4776939/1‑93 (MQ=255)

                                                      aGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCa                                    >  2:3967580/1‑93 (MQ=255)

                                                        gTAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATc                                  >  2:4133351/1‑93 (MQ=255)

                                                         tAAAGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATcg                                 >  2:2965757/1‑93 (MQ=255)

                                                           aaGACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATcgcg                               >  2:2844055/1‑93 (MQ=255)

                                                            aGACGTCCGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGa                              <  2:3746810/93‑1 (MQ=255)

                                                             gACGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGat                             >  1:3674102/1‑93 (MQ=255)

                                                              aCGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGata                            <  2:2901220/93‑1 (MQ=255)

                                                              aCGTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGata                            <  1:2053387/93‑1 (MQ=255)

                                                              aCGCCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGata                            <  1:5942117/93‑1 (MQ=255)

                                                                gTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGAtata                          <  2:3008339/93‑1 (MQ=255)

                                                                gTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGAtata                          <  2:5847000/93‑1 (MQ=255)

                                                                gTCGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGAtata                          >  1:3439347/1‑93 (MQ=255)

                                                                 tCGGGGATCAGCAGCACCGAACAGGCGGGGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAg                         >  2:1845215/1‑93 (MQ=255)

                                                                  cGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGa                        <  2:1575082/93‑1 (MQ=255)

                                                                  cGGGGATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGa                        <  2:4362215/93‑1 (MQ=255)

                                                                   ggggATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGAc                       >  2:1368748/1‑93 (MQ=255)

                                                                     ggATCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGt                     <  2:3202201/93‑1 (MQ=255)

                                                                        tCAGCGGCACCGACCGAACGGTGTCCGCCAGTTGATGGCCCAGTTTTTTCACTCGCGCGCCGTCGCCCATTTGCATCGCGATTTAGACGttgt                  <  2:5496853/93‑3 (MQ=255)

                                                                        tCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTAt                  <  1:113142/93‑1 (MQ=255)

                                                                        tCAGCAGCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTAt                  >  1:776564/1‑93 (MQ=255)

                                                                         cagcagCACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATg                 >  1:5376737/1‑93 (MQ=255)

                                                                          agcagcACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCCCTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGa                <  1:252656/93‑1 (MQ=255)

                                                                          agcagcACCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGa                >  2:5816485/1‑93 (MQ=255)

                                                                           gcagcaCCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGaa               <  2:3049244/93‑1 (MQ=255)

                                                                           gcagcaCCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGaa               >  2:4917383/1‑93 (MQ=255)

                                                                             agcaCCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATc             <  2:1179101/93‑1 (MQ=255)

                                                                              gcaCCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCt            <  1:708474/93‑1 (MQ=255)

                                                                              gcaCCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCt            <  2:2210632/93‑1 (MQ=255)

                                                                              gcaCCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCt            >  2:4746986/1‑93 (MQ=255)

                                                                                aCCGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTg          >  1:107543/1‑93 (MQ=255)

                                                                                 ccGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGc         <  1:236980/93‑1 (MQ=255)

                                                                                  cGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGcc        >  1:4030749/1‑93 (MQ=255)

                                                                                  cGAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGcc        <  1:1154060/93‑1 (MQ=255)

                                                                                   gAACAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGccc       >  1:2195061/1‑93 (MQ=255)

                                                                                    aaCAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCCCg      >  2:3763021/1‑93 (MQ=255)

                                                                                     aCAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCCCGc     >  2:4375107/1‑93 (MQ=255)

                                                                                     aCAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCCCGc     >  1:5566504/1‑93 (MQ=255)

                                                                                      cAGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCCCGCt    <  2:3225744/93‑1 (MQ=255)

                                                                                       aGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCCCTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCCCGCtt   <  2:363646/93‑1 (MQ=255)

                                                                                       aGGCGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCCCGCtt   <  2:1887457/93‑1 (MQ=255)

                                                                                        ggtggtGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCCCGCttt  <  1:4159177/93‑1 (MQ=255)

GCGGCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGACGTCGGGGATCAGCAGCACCGAACAGGTGGTGTCCGCCAGTTGATGGACCAGTTTTTTCACTCGCGCGCCGTCGCACATTTGCATCGCGATATAGACGTTATGAATCTTGCCCGCTTT  >  NC_000913/2118796‑2118976

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`