BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,549,500	T→C	T83A (ACG→GCG)	b2433 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,549,500	0	T	C	97.2%	598.3 / 3.4	180	T83A (ACG→GCG)	b2433	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (3/2); new base C (96/79); total (99/81)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.92e-01

Only 100 of 193 total aligned reads displayed.

CCGTTCAGCCACAGCCACGGTTGCCAGCAAAGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGTAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTATCGTGATCGGGATAAAACA  >  NC_000913/2549409‑2549589

ccGTTCAGCCACAGCCACGGTTGCCAGCAAAGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGTa                                                                                          >  1:2399878/1‑93 (MQ=255)

 cGTTCAGCCACAGCCACGGTTGCCAGCAAAGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAg                                                                                         >  2:886918/1‑93 (MQ=255)

  gTTCAGCCACAGCCACGGTTGCCAGCAAAGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGc                                                                                        >  2:5320304/1‑93 (MQ=255)

   ttCAGCCACAGCCACGGTTGCCAGCAAAGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGcc                                                                                       >  1:1060109/1‑93 (MQ=255)

   ttCAGCCACAGCCACGGTTGCCAGCAAAGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGcc                                                                                       >  2:240540/1‑93 (MQ=255)

    tCAGCCACAGCCACGGTTGCCAGCAAAGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGccc                                                                                      <  2:4883054/93‑1 (MQ=255)

    tCAGCCACAGCCACGGTGGCCAGCAAAGTAAAACCACCGGCGCCAACAGCAACAGAAAAGAGAGTACACGCCAGGTGCGAGGAAACGCAGccc                                                                                      <  1:3056541/93‑1 (MQ=255)

      agccacagccacGGTTGCCAGCAAAGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCccgc                                                                                    <  1:2197696/93‑1 (MQ=255)

      agcaacagccacGGTTGCCAGCAAAGTAAACCCCCCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCccgc                                                                                    <  1:4928185/93‑1 (MQ=255)

       gccacagccacGGTTGCCAGCAAAGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCccgcc                                                                                   >  1:5269171/1‑93 (MQ=255)

         cacagccacGGTTGCCAGCAAAGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCccgccgc                                                                                 >  2:4865605/1‑92 (MQ=255)

           cagccacGGTTGCCAGCAAAGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGAcc                                                                               >  1:5068101/1‑93 (MQ=255)

           aggccacGGTTGCCAGCAAAGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGAcc                                                                               <  2:3441559/91‑1 (MQ=255)

            agccacGGTTGCCAGCAAAGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCg                                                                              >  2:3158365/1‑93 (MQ=255)

             gccacGGTTGCCAGCAAAGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGc                                                                             >  2:1950234/1‑93 (MQ=255)

               cacGGTTGCCAGCAAAGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTc                                                                           <  1:1913464/93‑1 (MQ=255)

               cacGGTTGCCAGCAAAGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTc                                                                           >  2:1754957/1‑93 (MQ=255)

                 cGGTTGCCAGCAAAGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTcaa                                                                         >  2:1678784/1‑93 (MQ=255)

                  ggTTGCCAGCAAAGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGCACACGCCAGGTGCGAGGAAACGTAGCACGGCGACCGCTcaac                                                                        >  1:1404082/1‑93 (MQ=255)

                   gTTGCCAGCAAAGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTcaaca                                                                       >  2:5202412/1‑93 (MQ=255)

                    ttGCCAGCAAAGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTcaacaa                                                                      >  1:2477725/1‑93 (MQ=255)

                       ccAGCAAAGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACaaaaa                                                                   <  2:4113385/93‑1 (MQ=255)

                        cAGCAAAGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGTAGCCCGCCGACCGCTCAACAAAAAc                                                                  >  2:4003466/1‑93 (MQ=255)

                        cAGCAAAGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAAc                                                                  <  2:2342913/93‑1 (MQ=255)

                           cAAAGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGcc                                                               <  2:2194995/93‑1 (MQ=255)

                            aaaGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCa                                                              >  2:584591/1‑93 (MQ=255)

                            aaaGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGGACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCa                                                              >  1:3386351/1‑93 (MQ=255)

                             aaGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAg                                                             <  1:5716940/93‑1 (MQ=255)

                              aGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGc                                                            >  2:1983994/1‑93 (MQ=255)

                              aGTAAAACCACCTGCGCCAACAGCAACAGAAAAGAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGc                                                            <  2:2712546/93‑1 (MQ=255)

                               gTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCa                                                           >  1:258115/1‑93 (MQ=255)

                                tAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCAc                                                          <  1:5957210/93‑1 (MQ=255)

                                 aaaaCCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCAcc                                                         >  1:941152/1‑93 (MQ=255)

                                  aaaCCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCAccg                                                        <  1:4150945/93‑1 (MQ=255)

                                   aaCCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCAccgc                                                       >  1:2167496/1‑93 (MQ=255)

                                    accaccTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCAccgcc                                                      <  2:1536698/93‑1 (MQ=255)

                                    accaccTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTAAACAAAAACGCCAGCAccgcc                                                      >  1:2673233/1‑93 (MQ=255)

                                      caccTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCgg                                                    >  2:593709/1‑93 (MQ=255)

                                       cccTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGa                                                   <  2:4509660/92‑1 (MQ=255)

                                       cccTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGa                                                   <  1:3818695/92‑1 (MQ=255)

                                         cTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAAt                                                 >  1:237137/1‑93 (MQ=255)

                                         cTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAAt                                                 >  1:774442/1‑93 (MQ=255)

                                         cTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAAt                                                 <  2:2589717/93‑1 (MQ=255)

                                          tGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATg                                                <  1:281063/93‑1 (MQ=255)

                                           gcgcCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGc                                               <  2:5206064/93‑1 (MQ=255)

                                             gcCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAACACGCCAGCACCGCCGGAATGCCa                                             >  1:5855843/1‑93 (MQ=255)

                                             gcCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCa                                             >  2:5602115/1‑93 (MQ=255)

                                             cccAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCa                                             <  2:2455621/92‑1 (MQ=255)

                                               caacagcaacagAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAgg                                           >  2:1454157/1‑93 (MQ=255)

                                                 acagcaacagAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGaa                                         <  1:2931674/93‑1 (MQ=255)

                                                  cagcaacagAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAAt                                        <  1:4856565/93‑1 (MQ=255)

                                                   agcaacagAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATc                                       <  1:2474800/93‑1 (MQ=255)

                                                    gcaacagAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCa                                      >  2:1080569/1‑93 (MQ=255)

                                                    gcaacagAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCa                                      >  2:4275646/1‑93 (MQ=255)

                                                     caacagAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAg                                     >  1:4099601/1‑93 (MQ=255)

                                                      aacagAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGc                                    >  2:3188491/1‑93 (MQ=255)

                                                      aacagAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGc                                    >  1:1023120/1‑93 (MQ=255)

                                                      aacagAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGc                                    <  2:4088812/93‑1 (MQ=255)

                                                      aacagAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGc                                    <  2:920024/93‑1 (MQ=255)

                                                        cagAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGccc                                  >  2:1266049/1‑93 (MQ=255)

                                                         agAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGcccc                                 >  1:2964920/1‑93 (MQ=255)

                                                         agAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGcccc                                 >  1:4901761/1‑93 (MQ=255)

                                                          gAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCcca                                <  1:1102225/93‑1 (MQ=255)

                                                          gAAAATAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCcca                                <  2:2504956/93‑1 (MQ=255)

                                                           aaaaTAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCccag                               >  1:4601644/1‑93 (MQ=255)

                                                               tAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCccagccag                           >  1:4223281/1‑93 (MQ=255)

                                                               tAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCccagccag                           >  1:5698655/1‑93 (MQ=255)

                                                               tAGAGTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCccagccag                           >  1:5413002/1‑93 (MQ=255)

                                                               aagagTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCccagccag                           <  2:2241241/92‑1 (MQ=255)

                                                                 gagTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGaa                         <  2:95957/93‑1 (MQ=255)

                                                                   gTACACGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAAt                       >  1:1831933/1‑93 (MQ=255)

                                                                    tACACGCCAGGTGCGAGTAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAAtt                      >  2:4169610/1‑93 (MQ=255)

                                                                    gccacGCGAGCTGCGAGGAACCGCAGCCCGCCGCCCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAAtt                      <  1:3499465/91‑1 (MQ=255)

                                                                     acacGCCAGGTGCGAGGAACCGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTa                     <  1:1628751/93‑1 (MQ=255)

                                                                      cacGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTAt                    <  2:6052449/93‑1 (MQ=255)

                                                                      cacGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTAt                    <  2:2209638/93‑1 (MQ=255)

                                                                       ccGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTATc                   <  2:442104/92‑1 (MQ=255)

                                                                       acGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTATc                   <  2:2576695/93‑1 (MQ=255)

                                                                        cGCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTATCg                  <  1:3432568/93‑1 (MQ=255)

                                                                         gCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTATCGt                 <  2:273479/93‑1 (MQ=255)

                                                                         gCCAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACAGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTATCGt                 >  2:4632715/1‑93 (MQ=255)

                                                                          ccAGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTATCGTg                >  2:3026396/1‑93 (MQ=255)

                                                                          ccAGGTGCGAGAAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTATCGTg                <  2:6126017/93‑1 (MQ=255)

                                                                            aGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTATCGTGAt              <  2:3868157/93‑1 (MQ=255)

                                                                            aGGTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTATCGTGAt              <  2:3220379/93‑1 (MQ=255)

                                                                             ggTGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTATCGTGAtg             >  1:957229/1‑92 (MQ=255)

                                                                               tGCGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTATCGTGATCgg           <  1:5530714/93‑1 (MQ=255)

                                                                                 cGAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTATCGTGATCGGGa         <  1:5717011/93‑1 (MQ=255)

                                                                                  gAGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTATCGTGATCGGGAt        >  2:5079090/1‑93 (MQ=255)

                                                                                   aGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTATCGTGATCGGGATa       <  1:1348564/93‑1 (MQ=255)

                                                                                   aGGAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTATCGTGATCGGGATa       >  2:5957102/1‑93 (MQ=255)

                                                                                    ggAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTATCGTGATCGGGATaa      >  1:1997775/1‑93 (MQ=255)

                                                                                    ggAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTATCGTGATCGGGATaa      <  2:367737/93‑1 (MQ=255)

                                                                                    ggAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTATCGTGATCGGGATaa      >  2:2775362/1‑93 (MQ=255)

                                                                                     gAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTATCGTGATCGGGATaaa     >  2:228695/1‑93 (MQ=255)

                                                                                     gAAACGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTATCGTGATCGGGATaaa     <  1:4518326/93‑1 (MQ=255)

                                                                                      aaaCGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTATCGTGATCGGGATaaaa    <  1:3832403/93‑1 (MQ=255)

                                                                                       aaCGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTATCGTGATCGGGATAAAAc   <  1:1963077/93‑1 (MQ=255)

                                                                                       aaCGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTATCGTGATCGGGATAAAAc   <  1:3627181/93‑1 (MQ=255)

                                                                                        aCGCAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTATCGTGATCGGGATAAAACa  >  1:3927207/1‑93 (MQ=255)

CCGTTCAGCCACAGCCACGGTTGCCAGCAAAGTAAAACCACCTGCGCCAACAGCAACAGAAAATAGAGTACACGCCAGGTGCGAGGAAACGTAGCCCGCCGACCGCTCAACAAAAACGCCAGCACCGCCGGAATGCCAGGAATCAGCCCCAGCCAGAAATTATCGTGATCGGGATAAAACA  >  NC_000913/2549409‑2549589

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`