| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,166,935 | 2 bp→CG | coding (312‑313/483 nt) | b3023 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,166,935 | 0 | G | C | 99.1% | 783.3 / NA | 221 | L105V (CTT→GTT) | b3023 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (97/121); minor base A (2/0); total (99/122) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| * | NC_000913 | 3,166,936 | 0 | C | G | 99.6% | 788.1 / ‑4.8 | 221 | Q104H (CAG→CAC) | b3023 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base G (99/121); total (99/122) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.66e-01 | |||||||||||
Only 100 of 227 total aligned reads displayed.
TGCTTTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAAGCTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGCTGC > NC_000913/3166849‑3167021 || gCTTTACGCATTTTCTCGCCTCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCgg < 1:2042002/93‑1 (MQ=255) gCTTTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCgg > 2:3827515/1‑93 (MQ=255) gCTTTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCgg > 2:84911/1‑93 (MQ=255) cTTTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCggg < 2:5726422/93‑1 (MQ=255) tttACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGc > 2:1749153/1‑93 (MQ=255) tttACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGc > 2:2534165/1‑93 (MQ=255) tttACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGc > 2:221279/1‑93 (MQ=255) tACGCTTTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCa < 2:4163586/93‑1 (MQ=255) aCGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGcccc > 2:1664854/1‑91 (MQ=255) gCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACgg < 2:4057975/93‑1 (MQ=255) aTTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCa > 1:5335372/1‑93 (MQ=255) aTTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCa > 2:3021394/1‑93 (MQ=255) ttttCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGGCACGGCAt > 1:2622222/1‑93 (MQ=255) tttCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATa > 2:4557723/1‑93 (MQ=255) tttCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGGGGCGGGCCACGGCATa > 2:1463444/1‑93 (MQ=255) tctcGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAAc < 2:4209910/93‑1 (MQ=255) cgccgcTTGCAGGGAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTc < 1:1566973/93‑1 (MQ=255) cgccgcTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTc > 2:3394132/1‑93 (MQ=255) cgcTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTTGCTAACGTGGCGGGCCACGGCATAACGTCCAc > 1:5643537/1‑93 (MQ=255) cgcTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCAc < 2:264512/93‑1 (MQ=255) gcTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGGCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCAcc > 2:4285045/1‑93 (MQ=255) cTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCg < 2:298262/93‑1 (MQ=255) tGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACTGGt < 2:542350/93‑1 (MQ=255) gcaggcagCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTa < 2:5634740/93‑1 (MQ=255) caggcagCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTaa < 1:1058811/93‑1 (MQ=255) cAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCa > 2:3441428/1‑93 (MQ=255) cAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCa < 2:3104223/93‑1 (MQ=255) cAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCa < 2:3905702/93‑1 (MQ=255) cgTGGCGAATGATGCCCCATGCCGTGTGTGAAATCTCGTCCAGCTCGCCACCGTGGCGGGCCACGGCCTACCGTCCACCGGTAAGTTCACCAt < 2:5495227/92‑1 (MQ=255) aGTGGCGAATGATGCGCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCAt > 2:5994658/1‑93 (MQ=255) aGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCAt > 1:5508038/1‑93 (MQ=255) aGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCAt < 2:646489/93‑1 (MQ=255) aGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCAt > 2:5234897/1‑93 (MQ=255) gTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCCCGGCATAACGTCCACCCGTAAGTTCCCCAtt > 1:83908/1‑93 (MQ=255) gTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCAtt > 1:2059763/1‑93 (MQ=255) tGGCGAATGACGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTg > 1:2335820/1‑93 (MQ=255) gAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGATACGGCATAACGTCCACCGGTAAGTTCACCATTGCTca > 2:4396012/1‑93 (MQ=255) tgatgCCCCATTCCTTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCCCCGGTAAGTTCACCATTGCTCacac < 1:352172/93‑1 (MQ=255) gatgCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACAcc > 2:6082912/1‑93 (MQ=255) atgCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCa > 2:4657229/1‑93 (MQ=255) tgCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCAt < 2:1545772/93‑1 (MQ=255) tgCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCAt < 1:3547960/93‑1 (MQ=255) tgCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCAt < 1:2210589/93‑1 (MQ=255) tgCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCAt < 2:1006223/93‑1 (MQ=255) ccccATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATaa < 2:4698567/93‑1 (MQ=255) gcaaTACCGTGTGAGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAAc < 2:4871583/90‑1 (MQ=255) cccATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAAc < 2:2950566/93‑1 (MQ=255) cccATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAAc > 2:2736967/1‑93 (MQ=255) ccATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACg > 2:1364154/1‑93 (MQ=255) ccATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACg > 1:543398/1‑93 (MQ=255) cATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGa > 1:1363177/1‑93 (MQ=255) cATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGa > 1:4659828/1‑93 (MQ=255) cATACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGa < 2:2566426/93‑1 (MQ=255) cATACCGTGTGTGAAAGATCGTCCAGCTCGCCAACGTGGCGGGACACGGCATAACGTCCAGCGGTAAGTTCACCATTGCTCACACCATAACGa < 2:2492350/93‑1 (MQ=255) aTACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGAt > 1:1193796/1‑93 (MQ=255) aTACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACAGGTAAGTTCACCATTGCTCACACCATAACGAt > 1:2231041/1‑93 (MQ=255) tACCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGAtt < 2:5875756/93‑1 (MQ=255) aCCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTa < 1:2836812/93‑1 (MQ=255) aCCGTGTGTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTa < 1:4480027/93‑1 (MQ=255) ccGTGGTTGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTAt < 2:2086772/93‑1 (MQ=255) gtgtgtGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCg > 1:3026452/1‑93 (MQ=255) gtgtgtGAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCg < 1:4693578/93‑1 (MQ=255) tgtgtgAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCgg < 1:4015777/93‑1 (MQ=255) tgtgtgAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACAGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCgg < 2:2330606/93‑1 (MQ=255) gtgtgAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCggg < 2:2364135/93‑1 (MQ=255) gtgtgAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCggg > 2:817753/1‑93 (MQ=255) gtgAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGaa > 2:3680413/1‑93 (MQ=255) gtgAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGaa < 2:936725/93‑1 (MQ=255) tgAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAAt < 2:2006448/93‑1 (MQ=255) tgAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAAt < 2:1855850/93‑1 (MQ=255) gAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATc > 1:3458568/1‑93 (MQ=255) gAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATc < 1:2221374/93‑1 (MQ=255) gAAATATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATc > 1:3674606/1‑93 (MQ=255) aaaTATCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCg < 1:2104777/93‑1 (MQ=255) aaaTATCGTCCAGCTCGCCAA‑CGTGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCgg < 1:76068/93‑1 (MQ=255) atatCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGt > 2:1071575/1‑93 (MQ=255) tatCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGtt < 2:1221098/93‑1 (MQ=255) tatCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGtt < 1:3728140/93‑1 (MQ=255) tatCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGtt < 1:4247416/93‑1 (MQ=255) atCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTc > 1:1087592/1‑93 (MQ=255) atCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTc > 1:4052199/1‑93 (MQ=255) atCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTc < 1:5930571/93‑1 (MQ=255) tCGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCg > 1:3116331/1‑93 (MQ=255) tgTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGc < 1:5677879/92‑1 (MQ=255) cGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGc < 2:5465344/93‑1 (MQ=255) cGTCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGc > 1:4870063/1‑93 (MQ=255) ctCCAGCGCCCCAACGGGGCGGGCCACGGCATAACGTCCACCGGTAAATTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCt < 1:4779488/92‑1 (MQ=255) tCCAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTa > 1:4942198/1‑93 (MQ=255) ccAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTaa < 1:336593/93‑1 (MQ=255) ccAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTaa < 2:2847709/93‑1 (MQ=255) ccAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTaa < 1:6117109/93‑1 (MQ=255) cAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAAc > 1:4115714/1‑93 (MQ=255) cAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAAc < 1:721706/93‑1 (MQ=255) cAGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAAc < 1:2574603/93‑1 (MQ=255) aGCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACg < 1:3884127/93‑1 (MQ=255) gCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGc > 2:2794574/1‑93 (MQ=255) gCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGc > 1:311355/1‑93 (MQ=255) gCTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGc < 1:319358/93‑1 (MQ=255) cTCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGCt < 2:4776631/93‑1 (MQ=255) tCGCCAACGTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGCTg > 2:5375205/1‑93 (MQ=255) || TGCTTTACGCATTTTCTCGCCGCTTGCAGGCAGCCAGTGGCGAATGATGCCCCATACCGTGTGTGAAATATCGTCCAGCTCGCCAAGCTGGCGGGCCACGGCATAACGTCCACCGGTAAGTTCACCATTGCTCACACCATAACGATTATCGGGAATCGGTTCGCTAACGCTGC > NC_000913/3166849‑3167021 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |