BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,026,252	2 bp→GC	coding (110‑111/1164 nt)	fadA ←	thiolase I

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,026,252	0	C	G	100.0%	714.2 / NA	202	T37S (ACG→AGC)	fadA	thiolase I
Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (97/105); total (97/105)
*	NC_000913	4,026,253	0	G	C	100.0%	693.4 / NA	201	T37S (ACG→AGC)	fadA	thiolase I
Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (96/105); total (96/105)

Only 100 of 210 total aligned reads displayed.

AAACCCTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGCGTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAATTGCA  >  NC_000913/4026166‑4026339

||

aaaCCCTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGGTACGCGCCAGCAGGCTACGc                                                                                   >  2:8010/1‑93 (MQ=255)

 aaCCCTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCCGCAGGCTACGCa                                                                                  >  1:5843167/1‑93 (MQ=255)

 aaCCCTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCa                                                                                  >  2:3080203/1‑93 (MQ=255)

  aCCCTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCAt                                                                                 <  2:2647749/93‑1 (MQ=255)

   cccTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGGTACGCGCCAGCAGGCTACGCAtt                                                                                >  2:3863821/1‑93 (MQ=255)

     cTGCTCCAGCGTCTGCTGCACACACCCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTaa                                                                              <  1:2421706/93‑1 (MQ=255)

     cTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCCGCGCCGGGTTACGCGCCAGCAGGCTACGCATTaa                                                                              >  1:4604375/1‑93 (MQ=255)

     cTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTaa                                                                              >  1:413240/1‑93 (MQ=255)

     cTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTaa                                                                              >  1:5114819/1‑93 (MQ=255)

       gCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAAt                                                                            >  2:5268864/1‑93 (MQ=255)

       gCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAAt                                                                            <  1:552075/93‑1 (MQ=255)

         tCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGa                                                                          >  2:2841987/1‑93 (MQ=255)

         tCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGa                                                                          <  2:4724491/93‑1 (MQ=255)

         tCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGC‑TCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAg                                                                         >  1:168853/1‑93 (MQ=255)

         cccAGCGTCTGCTGCACACACCCCCAGTAAATATCGTCGAGGCCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGa                                                                          <  1:3767880/92‑1 (MQ=255)

          ccAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAg                                                                         >  1:3806850/1‑93 (MQ=255)

            aGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCg                                                                       <  2:4034726/93‑1 (MQ=255)

            aGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCg                                                                       >  1:2833866/1‑93 (MQ=255)

             gCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCgg                                                                      >  2:1949701/1‑93 (MQ=255)

             gCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCgg                                                                      >  2:3977122/1‑93 (MQ=255)

               gTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGgag                                                                    >  1:4010512/1‑93 (MQ=255)

               gTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGgag                                                                    >  2:5231785/1‑93 (MQ=255)

                tCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGgaga                                                                   >  2:5130133/1‑93 (MQ=255)

                tCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGAATTAAATGAGCGgaga                                                                   >  2:4440584/1‑93 (MQ=255)

                tCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGACGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGgaga                                                                   >  2:3444827/1‑93 (MQ=255)

                     tgcACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCTGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGAtct                                                              <  1:1008750/93‑1 (MQ=255)

                     tgcACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGAtct                                                              >  2:331707/1‑93 (MQ=255)

                      gcACCCAACCCCAGTAAATATCGTCGAGGGCCTCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGAtctt                                                             <  2:3378192/93‑1 (MQ=255)

                      gcACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGAtctt                                                             <  1:1828646/93‑1 (MQ=255)

                      gcACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGAtctt                                                             <  2:4386717/93‑1 (MQ=255)

                      gcACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGAtctt                                                             <  2:5923316/93‑1 (MQ=255)

                       cacacaCCCCCATAAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGAtcttc                                                            <  1:1232650/93‑1 (MQ=255)

                        acacaACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGAtcttct                                                           <  2:482828/93‑1 (MQ=255)

                        acacaACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGAtcttct                                                           <  1:2316147/93‑1 (MQ=255)

                          acaACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTgc                                                         >  2:3820222/1‑93 (MQ=255)

                             aCCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTgcacg                                                      >  2:4075684/1‑93 (MQ=255)

                              ccccAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTgcacgc                                                     <  2:3741628/93‑1 (MQ=255)

                                ccAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGGTCTTCTgcacgcac                                                   >  1:5401585/1‑93 (MQ=255)

                                 cAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGcacgcacg                                                  <  2:5360144/93‑1 (MQ=255)

                                  aGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGt                                                 >  1:1467788/1‑93 (MQ=255)

                                  aGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGt                                                 <  1:6119593/93‑1 (MQ=255)

                                   gTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGtt                                                <  2:2979831/93‑1 (MQ=255)

                                    tAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTa                                               <  2:2098232/93‑1 (MQ=255)

                                     aaaTATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTAc                                              <  2:2227044/93‑1 (MQ=255)

                                      aaTATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACg                                             >  2:2881930/1‑93 (MQ=255)

                                       atatCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGa                                            >  2:3195746/1‑93 (MQ=255)

                                       atatCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGa                                            >  1:839141/1‑93 (MQ=255)

                                         atCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGaaa                                          >  2:5022289/1‑93 (MQ=255)

                                          tcgtcgAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGaaaa                                         <  2:1690445/93‑1 (MQ=255)

                                          tcgtcgAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGaaaa                                         >  1:3437345/1‑93 (MQ=255)

                                            gtcgAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGc                                       <  2:1066973/93‑1 (MQ=255)

                                             tcgAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCa                                      <  1:5684897/93‑1 (MQ=255)

                                              cgAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCAc                                     <  1:3198601/93‑1 (MQ=255)

                                               gAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCAcc                                    <  1:1142502/93‑1 (MQ=255)

                                               gAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCAcc                                    <  1:3018945/93‑1 (MQ=255)

                                                aGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCg                                   >  1:3874937/1‑93 (MQ=255)

                                                aGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCg                                   >  2:1290225/1‑93 (MQ=255)

                                                aGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATATTCTGCACGCACGTTACGAAAAGCAcag                                   >  1:5565862/1‑91 (MQ=255)

                                                 gggCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGc                                  >  1:3069411/1‑93 (MQ=255)

                                                 gggCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGc                                  >  2:4890603/1‑93 (MQ=255)

                                                   gccgccGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGccc                                <  1:4791796/93‑1 (MQ=255)

                                                   gccgccGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGccc                                <  2:1321450/93‑1 (MQ=255)

                                                    ccgcggCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTGCGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTGACGAAAAGCACCGCCCt                               <  1:4352545/93‑1 (MQ=255)

                                                    ccgccgCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCt                               <  1:4739673/93‑1 (MQ=255)

                                                    ccgccgCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCt                               <  2:1140337/93‑1 (MQ=255)

                                                     cgccgcTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCtt                              <  2:18202/93‑1 (MQ=255)

                                                      gccgcTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGTTCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTc                             >  1:1028941/1‑93 (MQ=255)

                                                       ccgcTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCg                            <  2:4228797/93‑1 (MQ=255)

                                                       ccgcTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCg                            >  2:6035833/1‑93 (MQ=255)

                                                        cgcTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGa                           >  2:2392032/1‑93 (MQ=255)

                                                        cgcTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGa                           >  1:737421/1‑93 (MQ=255)

                                                         gcTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGaa                          >  1:3702993/1‑93 (MQ=255)

                                                         ccTTCCCGCGCCGGGTTACGCGCCAGCAGGCTACGCATTCAATGAGCGGAGCGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGaa                          <  2:3637438/92‑1 (MQ=255)

                                                          cTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAAc                         <  2:1564690/93‑1 (MQ=255)

                                                             ccAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGc                      <  2:627327/93‑1 (MQ=255)

                                                              cAGCGCCGTGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGcc                     <  1:134782/93‑1 (MQ=255)

                                                              cAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGcc                     >  2:1534107/1‑93 (MQ=255)

                                                               aGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGccc                    >  1:2311136/1‑93 (MQ=255)

                                                                 cgcCGGGTTACGCGCCAGCAGGCTACGCATTAAATGGGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCAt                  <  1:5770255/93‑1 (MQ=255)

                                                                 cgcCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCAt                  <  1:2779260/93‑1 (MQ=255)

                                                                   ccGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCg                <  2:5807809/93‑1 (MQ=255)

                                                                   ccGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCg                <  1:2027414/93‑1 (MQ=255)

                                                                    cGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCgg               <  2:6136967/93‑1 (MQ=255)

                                                                     gggTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCggg              >  2:563165/1‑93 (MQ=255)

                                                                      ggTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCgggg             <  1:663653/93‑1 (MQ=255)

                                                                      ggTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCgggg             >  1:4401301/1‑93 (MQ=255)

                                                                       gTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGt            <  2:4989803/93‑1 (MQ=255)

                                                                       gTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGt            >  2:2619254/1‑93 (MQ=255)

                                                                         tACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGc          <  1:3558935/93‑1 (MQ=255)

                                                                          aCGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCg         >  2:1489793/1‑93 (MQ=255)

                                                                          aCGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGGGCg         >  2:574169/1‑93 (MQ=255)

                                                                            gcgcCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGaa       <  1:2717846/93‑1 (MQ=255)

                                                                            gcgcCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGaa       <  2:719825/93‑1 (MQ=255)

                                                                             cgcCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAAt      <  2:250983/93‑1 (MQ=255)

                                                                              gcCAGCAGGCTACGCCTTAAATGAGAGGAGCGATCATCTGCACGCACGTTACGAAAATCACCGCCCTTCGAACTGCCCATCGGGGTGCgcagt     >  1:2905226/1‑89 (MQ=255)

                                                                              gcCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAAtt     >  2:1976549/1‑93 (MQ=255)

                                                                                cagcagGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAATTGc   <  2:5386795/93‑1 (MQ=255)

                                                                                cagcagGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAATTGc   >  1:1724554/1‑93 (MQ=255)

                                                                                cagcagGCTACGCATTAAATGAGCCGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCAACGGGGTGCGAATTGc   <  2:1955521/93‑1 (MQ=255)

                                                                                 agcaggCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAATTGCa  >  2:5479609/1‑93 (MQ=255)

||

AAACCCTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGCGTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAATTGCA  >  NC_000913/4026166‑4026339

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`