BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,820,144	Δ1 bp	intergenic (+24/+18)	b4542 → / ← oraA	hypothetical protein/OraA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,820,143	0	G	.	100.0%	1084.0 / NA	228	intergenic (+23/+19)	b4542/oraA	hypothetical protein/OraA
Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (135/93); total (135/93)

Only 100 of 241 total aligned reads displayed.

GCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGC  >  NC_000913/2820051‑2820231

  tAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAgta                                                                                        <  1:3242966/93‑3 (MQ=255)

  tAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAgta                                                                                        >  2:5901963/1‑91 (MQ=255)

   aaCGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAgtaa                                                                                       >  1:1035951/1‑90 (MQ=255)

    aCGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAgtaaa                                                                                      >  1:1672120/1‑89 (MQ=255)

    aCGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAgtaaa                                                                                      >  2:1122159/1‑89 (MQ=255)

     cGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCTGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTaaaa                                                                                    <  1:4842694/93‑1 (MQ=255)

     cGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTaaaa                                                                                    <  1:3275638/93‑1 (MQ=255)

     cGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTaaaa                                                                                    <  1:6577098/93‑1 (MQ=255)

      gAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAAt                                                                                   >  2:5029680/1‑93 (MQ=255)

       aaaTATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATa                                                                                  <  1:4622300/93‑1 (MQ=255)

       aaaTATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATa                                                                                  <  1:3958627/93‑1 (MQ=255)

       aaaTATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATa                                                                                  >  2:6255602/1‑93 (MQ=255)

           atCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGt                                                                              >  1:5903406/1‑93 (MQ=255)

            tCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTa                                                                             <  1:4335583/93‑1 (MQ=255)

            tCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTa                                                                             >  1:1002041/1‑93 (MQ=255)

             cGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTAt                                                                            >  2:668195/1‑93 (MQ=255)

              gCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATg                                                                           >  1:2195954/1‑93 (MQ=255)

               ccaccaGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGc                                                                          >  2:3958634/1‑93 (MQ=255)

                  ccaGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGtt                                                                       >  1:5645307/1‑93 (MQ=255)

                   caGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTc                                                                      <  1:1691977/93‑1 (MQ=255)

                   caGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTc                                                                      <  1:6257943/93‑1 (MQ=255)

                   caGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTc                                                                      >  2:5708713/1‑93 (MQ=255)

                    aGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCa                                                                     >  1:73642/1‑93 (MQ=255)

                     gCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAg                                                                    >  2:4120242/1‑93 (MQ=255)

                     gCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAg                                                                    >  2:4724886/1‑93 (MQ=255)

                     gCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAg                                                                    >  1:2790457/1‑93 (MQ=255)

                     gCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAg                                                                    >  1:222513/1‑93 (MQ=255)

                       tCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTc                                                                  <  2:5255661/93‑1 (MQ=255)

                        ccAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCg                                                                 >  2:371916/1‑93 (MQ=255)

                        ccAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCg                                                                 >  1:4698806/1‑93 (MQ=255)

                        ccAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCg                                                                 >  1:5101889/1‑93 (MQ=255)

                         cAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCgg                                                                <  1:3485754/93‑1 (MQ=255)

                          aGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGc                                                               >  2:2931046/1‑93 (MQ=255)

                           gCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCa                                                              >  1:821993/1‑93 (MQ=255)

                           gCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCa                                                              >  1:6055673/1‑93 (MQ=255)

                             gtgtCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCaaa                                                            >  1:5233867/1‑93 (MQ=255)

                               gtCTTACCCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAAt                                                          <  1:6200431/93‑1 (MQ=255)

                               ggcTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAAt                                                          <  1:3864570/91‑1 (MQ=255)

                                  ttAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTc                                                       <  1:5288413/93‑1 (MQ=255)

                                  ttAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTc                                                       <  2:1860107/93‑1 (MQ=255)

                                   tAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCg                                                      >  2:224712/1‑93 (MQ=255)

                                   tAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCg                                                      >  2:773647/1‑93 (MQ=255)

                                    aaCCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGc                                                     <  2:2158442/93‑1 (MQ=255)

                                     aCCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGcc                                                    >  1:5718800/1‑93 (MQ=255)

                                        gccgGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCaaa                                                 >  1:5839154/1‑93 (MQ=255)

                                         ccgGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAAt                                                <  1:3843183/93‑1 (MQ=255)

                                          cgGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAAtc                                               <  2:1299874/93‑1 (MQ=255)

                                          cgGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAAtc                                               <  1:4956047/93‑1 (MQ=255)

                                           gggCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAAtct                                              >  1:1863579/1‑93 (MQ=255)

                                            ggCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAAtctc                                             >  1:2811605/1‑93 (MQ=255)

                                             gCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTcc                                            <  2:90893/93‑1 (MQ=255)

                                             gCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTcc                                            >  2:3996638/1‑93 (MQ=255)

                                              cTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCt                                           <  1:371078/93‑1 (MQ=255)

                                              cTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCt                                           <  2:535208/93‑1 (MQ=255)

                                                ggTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTgt                                         >  2:3323429/1‑92 (MQ=255)

                                                ggTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTgg                                         >  2:6127311/1‑93 (MQ=255)

                                                 gTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGa                                        >  2:936012/1‑93 (MQ=255)

                                                    aCTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGatat                                     >  2:6370966/1‑93 (MQ=255)

                                                     cTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATc                                    <  2:6480042/93‑1 (MQ=255)

                                                      tGAAAAGTGGGAATAAGATAACTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCt                                   >  1:4227694/1‑93 (MQ=255)

                                                        aaaaGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTc                                 >  1:5497433/1‑93 (MQ=255)

                                                        aaaaGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTc                                 >  2:1652376/1‑93 (MQ=255)

                                                         aaaGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTca                                >  2:5302089/1‑92 (MQ=255)

                                                          aaGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCa                               <  2:2983884/93‑1 (MQ=255)

                                                            gTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATc                             <  2:3467864/93‑1 (MQ=255)

                                                              gggAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAg                           >  2:4845381/1‑93 (MQ=255)

                                                                gAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGAt                         >  2:117245/1‑93 (MQ=255)

                                                                gAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGAt                         <  1:6013497/93‑1 (MQ=255)

                                                                 aaTAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATa                        >  2:4346265/1‑93 (MQ=255)

                                                                  ataagataagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAg                       >  1:2502599/1‑93 (MQ=255)

                                                                  ataagataagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCCGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAg                       <  2:3562159/93‑1 (MQ=255)

                                                                   taagataagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGc                      >  2:2690966/1‑93 (MQ=255)

                                                                     agataagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCa                    <  2:2032321/93‑1 (MQ=255)

                                                                     agataagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGGTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCa                    >  1:1411470/1‑93 (MQ=255)

                                                                      gataagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCAc                   >  2:1507494/1‑93 (MQ=255)

                                                                       ataagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACg                  >  1:5920780/1‑93 (MQ=255)

                                                                       ataagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACg                  <  1:5028086/93‑1 (MQ=255)

                                                                       ataagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACg                  >  2:1695764/1‑93 (MQ=255)

                                                                       ataagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGGCGGCAACATTTCGCCAAATCTCCTGGCTATCTTCCATCAGATAGCCACg                  >  1:2683516/1‑93 (MQ=255)

                                                                        taagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGa                 >  1:6533486/1‑93 (MQ=255)

                                                                           gTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATag              >  1:3662961/1‑93 (MQ=255)

                                                                            ttttCTTGACTGGGAA‑GTAAAATTCCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATaga             <  1:6356454/93‑1 (MQ=255)

                                                                            ttttCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATaga             <  1:295386/93‑1 (MQ=255)

                                                                             tttCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATagag            >  2:3689262/1‑93 (MQ=255)

                                                                             tttCGTGACTGGGAA‑GTAAAATACCGTATGGTTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATagag            <  2:4682717/93‑1 (MQ=255)

                                                                              ttCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGc           >  2:1317981/1‑93 (MQ=255)

                                                                               tCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATGTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCa          >  1:3501136/1‑93 (MQ=255)

                                                                               tCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCa          <  2:4273356/93‑1 (MQ=255)

                                                                               tCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCa          >  2:6544670/1‑93 (MQ=255)

                                                                                cTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAg         >  2:2311932/1‑93 (MQ=255)

                                                                                cTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAg         >  1:4742868/1‑93 (MQ=255)

                                                                                   gACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGaaa      >  1:2988104/1‑93 (MQ=255)

                                                                                   gACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGaaa      >  2:2582465/1‑93 (MQ=255)

                                                                                   gACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGaaa      <  2:4768215/93‑1 (MQ=255)

                                                                                     cTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAAc    >  2:1005594/1‑93 (MQ=255)

                                                                                     cTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAAc    <  1:317759/93‑1 (MQ=255)

                                                                                      tGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACg   >  2:5810124/1‑93 (MQ=255)

                                                                                       gggAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGc  >  1:2604542/1‑93 (MQ=255)

                                                                                       gggAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGc  <  2:5107175/93‑1 (MQ=255)

                                                                                       gggAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGc  <  2:2742265/93‑1 (MQ=255)

GCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGC  >  NC_000913/2820051‑2820231

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`