| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,236,177 | Δ1 bp | intergenic (+239/‑45) | ygjR → / → ygjT | hypothetical protein/putative transport protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,236,176 | 0 | G | . | 98.9% | 1232.5 / 2.0 | 266 | intergenic (+238/‑46) | ygjR/ygjT | hypothetical protein/putative transport protein |
| Reads supporting (aligned to +/- strand): ref base G (3/0); new base . (111/152); total (114/152) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.75e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 288 total aligned reads displayed.
GGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTG > NC_000913/3236084‑3236264 | ggCAACCCGAAAGGAATACGCAGATGTATTCCTTTTTTGTTGTAAGTTAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTg < 1:5698439/93‑1 (MQ=255)ggCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTg > 2:3509289/1‑93 (MQ=255)ggCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTg > 2:5148768/1‑93 (MQ=255) gCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTga < 1:748280/93‑2 (MQ=255) gCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTga < 2:1857205/93‑2 (MQ=255) cAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTgac > 1:914940/1‑91 (MQ=255) aaCCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTgacg > 1:3275369/1‑90 (MQ=255) aaCCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTgacg > 2:3653273/1‑90 (MQ=255) aCCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTgacgt > 1:1557996/1‑89 (MQ=255) aCCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTgacgt > 2:4435427/1‑89 (MQ=255) ccGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCt > 1:3501107/1‑93 (MQ=255) ccGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCAT‑AAAAGCAGCGGCTGG‑CGTCtt > 2:6579751/1‑93 (MQ=255) cGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCtt > 1:4654788/1‑93 (MQ=255) gAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTc < 1:1724579/93‑1 (MQ=255) gAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTc > 2:2550866/1‑93 (MQ=255) aaGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCg > 1:840362/1‑93 (MQ=255) ggAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGAT‑GACGTCTTCCGAc > 2:382993/1‑93 (MQ=255) aaTACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGt < 2:1211211/93‑1 (MQ=255) aTACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGtt < 2:5663147/93‑1 (MQ=255) aTACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGtt > 1:5153729/1‑93 (MQ=255) aTACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGtt < 2:5102138/93‑1 (MQ=255) aTACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGtt < 1:2543561/93‑1 (MQ=255) aTACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGtt < 1:2812023/93‑1 (MQ=255) tACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTg < 2:2055713/93‑1 (MQ=255) gCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGcc < 2:4188117/93‑1 (MQ=255) cAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCg > 1:140744/1‑93 (MQ=255) aGACGTATTCTTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGt < 1:3015689/93‑1 (MQ=255) aGACGTATTCCTTTTTTGTTGTAAGTGAGCCCTAGCCGGAAGGCGAGGTCTATGCACAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGt < 1:2206765/93‑1 (MQ=255) gACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGtt < 1:2502032/93‑1 (MQ=255) gACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCCGCT‑GACGTCTTCCGACGTTGGCCGtt > 1:5359603/1‑93 (MQ=255) cGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGtttt < 1:1821291/93‑1 (MQ=255) cGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGtttt < 1:5212020/93‑1 (MQ=255) tATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGtttttt < 1:6443193/93‑1 (MQ=255) tATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGAGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGtttttt < 1:4888041/93‑1 (MQ=255) aTTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGttttttt > 2:1527897/1‑93 (MQ=255) ttCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTa > 2:6335738/1‑93 (MQ=255) tCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTAt > 1:4388068/1‑93 (MQ=255) tCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTAt < 1:3687242/93‑1 (MQ=255) cTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTAtgt < 1:5731510/93‑1 (MQ=255) cTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTAtgt > 2:2417110/1‑93 (MQ=255) cTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTAtgt < 2:5418924/93‑1 (MQ=255) attttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTAtgt > 1:6384437/2‑93 (MQ=255) gttgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGa < 2:2165869/93‑1 (MQ=255) ttgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGaa < 1:1265134/93‑1 (MQ=255) ttgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGaa < 2:40300/93‑1 (MQ=255) tgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAAc > 1:6152794/1‑93 (MQ=255) tgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAAc > 1:6645221/1‑93 (MQ=255) aGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCt > 1:5663595/1‑93 (MQ=255) aGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCt < 1:4743718/93‑1 (MQ=255) gTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTa < 1:4283229/93‑1 (MQ=255) agaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGa > 2:6627907/1‑93 (MQ=255) gaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTTCGACGATGGCCGTTTTTTTATGTGTAAGGAACTTCTATGaa > 1:4162164/1‑93 (MQ=255) gaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGaa > 2:3012865/1‑93 (MQ=255) gaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGaa > 2:5341266/1‑93 (MQ=255) gaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGaa > 1:1673093/1‑93 (MQ=255) aCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAAt < 2:3816571/93‑1 (MQ=255) aCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAAt > 1:3665760/1‑93 (MQ=255) ccTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATa > 2:433271/1‑93 (MQ=255) cTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATAc < 1:4533893/93‑1 (MQ=255) tGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTg < 2:502212/93‑1 (MQ=255) tGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTg < 1:5639347/93‑1 (MQ=255) gCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGt < 2:1622514/93‑1 (MQ=255) ccGGAAGGTGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTc < 1:640943/93‑1 (MQ=255) ccGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTc < 1:5836816/93‑1 (MQ=255) ccGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTc < 1:595713/93‑1 (MQ=255) cGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCg > 1:2142512/1‑93 (MQ=255) cGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCg > 2:5836757/1‑93 (MQ=255) ggAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCgg < 2:4350695/93‑1 (MQ=255) ggAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCgg < 1:5550999/93‑1 (MQ=255) gAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGc > 2:1724897/1‑93 (MQ=255) gAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGc > 2:4948376/1‑93 (MQ=255) gAAGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGc > 1:2072000/1‑93 (MQ=255) aaGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTGTGAATACTGTCGGCa < 1:1311102/93‑1 (MQ=255) aGGCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCAc > 2:2722201/1‑93 (MQ=255) ggCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACg > 1:1977805/1‑93 (MQ=255) gCGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCAAGc > 2:290930/1‑93 (MQ=255) cGAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGcc < 1:3226617/93‑1 (MQ=255) gAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCg > 2:1302716/1‑93 (MQ=255) gAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCg > 2:6073200/1‑93 (MQ=255) gAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCg > 2:4667795/1‑93 (MQ=255) gAGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCg > 1:3431923/1‑93 (MQ=255) aGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGt < 2:4069985/93‑1 (MQ=255) aGGTCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGt < 2:5818293/93‑1 (MQ=255) tCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGc < 1:5994511/93‑1 (MQ=255) tCTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGc > 2:6202406/1‑93 (MQ=255) cTATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCt < 2:267567/93‑1 (MQ=255) tATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTa > 1:1139436/1‑93 (MQ=255) tATGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTa > 1:3880940/1‑93 (MQ=255) tGCATAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATg < 1:1439554/93‑1 (MQ=255) aTAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATgggg > 2:3269526/1‑93 (MQ=255) aTAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATgggg < 1:5478292/93‑1 (MQ=255) aTAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATgggg < 1:410909/93‑1 (MQ=255) aTAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATgggg < 1:3947257/93‑1 (MQ=255) tAAAAAGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGc > 1:4822847/1‑93 (MQ=255) aaaaaaGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGc < 1:2409114/92‑1 (MQ=255) aaaGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGa < 1:101026/93‑1 (MQ=255) aaGCAGCGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGAt > 2:2615161/1‑93 (MQ=255) agcagcGGCT‑GACGCCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGAtt < 2:1508600/93‑1 (MQ=255) agcGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGc < 2:804761/93‑1 (MQ=255) gcGGCT‑GACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCt < 2:6377562/93‑1 (MQ=255) | GGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTG > NC_000913/3236084‑3236264 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |