| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,085,675 | Δ1 bp | intergenic (+38/+13) | yiiG → / ← frvR | hypothetical protein/putative frv operon regulatory protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,085,675 | 0 | G | . | 99.6% | 1081.4 / ‑3.5 | 231 | intergenic (+38/+13) | yiiG/frvR | hypothetical protein/putative frv operon regulatory protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base . (129/101); minor base C (0/1); total (129/102) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 | |||||||||||
Only 100 of 248 total aligned reads displayed.
GCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGCGATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACA > NC_000913/4085587‑4085762 | gCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCg < 1:6307771/93‑1 (MQ=255)gCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCg > 1:6537572/1‑93 (MQ=255) aTTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGa‑c > 2:1829550/1‑93 (MQ=255) aTTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGa‑c > 2:4040739/1‑93 (MQ=255) ttACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGa‑ca > 2:5953316/1‑93 (MQ=255) ttACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGa‑ca < 2:5841884/93‑1 (MQ=255) tACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGa‑cac > 1:4518558/1‑93 (MQ=255) tACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTGGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGa‑cac < 1:518655/93‑1 (MQ=255) gcgAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGt < 1:5083876/93‑1 (MQ=255) gcgAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGt < 2:4724976/93‑1 (MQ=255) gAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTc < 2:3185798/93‑1 (MQ=255) gAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTc < 1:1881154/93‑1 (MQ=255) aGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCa < 2:4338445/93‑1 (MQ=255) aGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCa > 1:4361659/1‑93 (MQ=255) gTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCAc < 1:2208262/93‑1 (MQ=255) aCAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCAccc > 1:2033767/1‑93 (MQ=255) cAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCAcccc > 1:5897289/1‑93 (MQ=255) aaaCGAAATGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCAcccc < 2:4506619/92‑1 (MQ=255) aaCGAAATGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCt < 1:3130107/93‑1 (MQ=255) aaCGAAATGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCt > 1:981431/1‑93 (MQ=255) aaCGAAATGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCt < 1:3842744/93‑1 (MQ=255) aaCGAAATGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCt > 1:1043944/1‑93 (MQ=255) aCGAAATGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCtt > 2:5202054/1‑93 (MQ=255) aCGAAATGGTTGATAACTATATTGGGCTGCGTTAAGCG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCtt < 2:2693436/93‑1 (MQ=255) cGAAATGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTtg > 2:4419419/1‑93 (MQ=255) aaTGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGa > 1:4760881/1‑93 (MQ=255) aaTGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGa > 2:3966546/1‑93 (MQ=255) aTGGTTGATAACTATAATAGCCTGCGTTAAACT‑TTTTTGATGAAAAATGCAGTGTCGGATGCGGTGC‑ATCCGA‑CACAGTTCACCCCTTGTGaa < 2:2628137/93‑1 (MQ=255) tGGTTGATGACTATCATAGCCTGCGTTAAACG‑TTTATGATGATAAATGCAGTGTCGGATCTGGCGC‑ATCCGA‑CACAGTTTACCCCTTGTGAAg > 1:2688717/1‑93 (MQ=255) tGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAg > 1:2091958/1‑93 (MQ=255) ggTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGt > 2:6233531/1‑93 (MQ=255) gTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTa > 2:145259/1‑93 (MQ=255) atgaCTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTc > 2:3163792/1‑93 (MQ=255) atgaCTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTc < 1:4179310/93‑1 (MQ=255) atgaCTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTc < 2:946175/93‑1 (MQ=255) ttattataATAGCCTGC‑TTAAACGTTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ACCCGA‑CACAGTTCACCCCTTGTGAAGTAACTcc < 2:120258/89‑1 (MQ=255) tgaCTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTcc > 2:1306738/1‑93 (MQ=255) tgaCTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTcc > 2:414996/1‑93 (MQ=255) tataATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATaa > 1:4249676/1‑93 (MQ=255) ataataGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATaaa > 2:5872774/1‑93 (MQ=255) ataataGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATaaa > 2:3695325/1‑93 (MQ=255) taataGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAAt > 2:6006148/1‑93 (MQ=255) taGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGcc > 1:6421044/1‑93 (MQ=255) taGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGcc < 2:2645781/93‑1 (MQ=255) taGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGcc < 2:4683219/93‑1 (MQ=255) gCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTc < 2:5130522/93‑1 (MQ=255) ccTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCa < 2:5015269/93‑1 (MQ=255) cTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCat < 2:1839133/93‑1 (MQ=255) tGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATGCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCata > 2:3477526/1‑93 (MQ=255) gCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTACATAAATGCCTCatac > 2:3604957/1‑92 (MQ=255) ttaaaaCT‑TTTTTAAGAAAAAATGCAGTGCCGGATGCGGC‑CCATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATcc < 1:249681/90‑1 (MQ=255) gTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATcc > 2:4235776/1‑93 (MQ=255) gTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGC‑CCATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATcc < 1:4379054/93‑1 (MQ=255) ttAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCCCCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCt < 1:941687/93‑1 (MQ=255) ttAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCt > 1:1442221/1‑93 (MQ=255) ttAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCt > 1:1121190/1‑93 (MQ=255) aaaCG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGt < 1:553025/93‑1 (MQ=255) aaCG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGtt > 2:2284644/1‑93 (MQ=255) aaCG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGtt > 2:4645942/1‑93 (MQ=255) aaCG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGtt < 2:1708727/93‑1 (MQ=255) aaCG‑TTTGTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGtt < 2:1720037/93‑1 (MQ=255) aCG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTa > 2:843825/1‑93 (MQ=255) aCG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTa > 1:4725258/1‑93 (MQ=255) aCG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTa < 2:3300021/93‑1 (MQ=255) cG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTaa > 1:4948251/1‑93 (MQ=255) g‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAAc > 1:617004/1‑93 (MQ=255) g‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAAc > 1:158005/1‑93 (MQ=255) ttGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCgg < 1:3669949/93‑1 (MQ=255) tgatgaTAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGc < 1:702539/93‑1 (MQ=255) tgatgaTAAATGCAGTGTCGGAGGCGGCGC‑ACCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGc < 1:1252678/93‑1 (MQ=255) gatgatAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCa > 1:816611/1‑93 (MQ=255) atgatAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCaa > 2:1745408/1‑93 (MQ=255) tgatAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCaat > 2:5992870/1‑93 (MQ=255) tgatAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCaat > 2:5554050/1‑93 (MQ=255) tgatAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCaat > 1:234149/1‑93 (MQ=255) atAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCaataa > 1:4486769/1‑93 (MQ=255) atAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCaataa < 2:2894855/93‑1 (MQ=255) tAAATGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCaataat > 1:3444184/1‑93 (MQ=255) aaaTGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAAtc > 1:1939785/1‑93 (MQ=255) aaaTGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAAtc < 2:6147906/93‑1 (MQ=255) aaaTGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAAtc > 1:5205520/1‑93 (MQ=255) aaaTGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAAtc > 2:4203277/1‑93 (MQ=255) aTGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAAtctc > 1:5670990/1‑93 (MQ=255) aTGCAGGGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAAtctc < 1:1794202/93‑1 (MQ=255) tGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTcc < 1:4427291/93‑1 (MQ=255) tGCAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTcc < 2:6511373/93‑1 (MQ=255) gaaGTGTCGTATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTccg < 1:3527708/91‑1 (MQ=255) cAGTGTCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAAACCGGCAATAATCTccgc > 2:1338201/1‑93 (MQ=255) tgtCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCgg < 2:2167549/93‑1 (MQ=255) gtCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGa < 2:5395671/93‑1 (MQ=255) tCGGGTGCGGCGC‑ATCCGACCACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGa < 2:1591103/93‑1 (MQ=255) tCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGAt > 1:2410279/1‑93 (MQ=255) tCGGATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGAt > 1:869216/1‑93 (MQ=255) gATGCGGCGC‑ATCCGA‑CACAGTTTACCCCTTGTGCAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGcg > 2:4835437/1‑92 (MQ=255) gATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCt < 1:671244/93‑1 (MQ=255) gATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCt > 1:6002656/1‑93 (MQ=255) gATGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCt > 2:3399459/1‑93 (MQ=255) aTGCGGCGC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTg < 1:317919/93‑1 (MQ=255) gcggcgC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGac < 2:1087221/93‑1 (MQ=255) cggcgC‑ATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGaca < 2:3647043/93‑1 (MQ=255) | GCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACG‑TTTTTGATGATAAATGCAGTGTCGGATGCGGCGCGATCCGA‑CACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACA > NC_000913/4085587‑4085762 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |