BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,957,124	+G	intergenic (+58/+26)	ilvC → / ← ppiC	ketol‑acid reductoisomerase/peptidyl‑prolyl cis‑trans isomerase C

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,957,123	1	.	G	100.0%	628.5 / NA	198	intergenic (+57/+27)	ilvC/ppiC	ketol‑acid reductoisomerase/peptidyl‑prolyl cis‑trans isomerase C
Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (68/130); total (68/130)

Only 100 of 220 total aligned reads displayed.

GACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑CTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAA‑GCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTC  >  NC_000913/3957033‑3957210

gACAGATATGAAGCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCCCCCCGCCC‑‑CGC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCaa                                                                                          <  2:3294301/93‑1 (MQ=18)

gACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCaa                                                                                          <  2:1806617/93‑1 (MQ=21)

gACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCaa                                                                                          <  1:5552659/93‑1 (MQ=21)

 aCAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAA‑g                                                                                        <  2:675265/93‑1 (MQ=21)

 aCAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAA‑g                                                                                        <  2:397507/93‑1 (MQ=21)

 aCAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAA‑g                                                                                        <  1:3033432/93‑1 (MQ=21)

 aCAGATATGAAACGTATTGCTGTTGCAGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAA‑g                                                                                        <  1:5979940/93‑1 (MQ=21)

   aGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAA‑ggc                                                                                      <  2:1443408/93‑3 (MQ=21)

     atatGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAA‑ggcct                                                                                    <  1:3247369/93‑5 (MQ=21)

     atatGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAAGGAGAAAACACTCAA‑ggcct                                                                                    <  2:6649291/93‑5 (MQ=21)

          aaaCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTcc                                                                                <  2:2659809/93‑1 (MQ=18)

          aaaCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTcc                                                                                <  1:3799621/93‑1 (MQ=18)

          aaaCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTcc                                                                                <  2:4103406/93‑1 (MQ=18)

           aaCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCt                                                                               <  2:4929641/93‑1 (MQ=18)

            aCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTg                                                                              <  2:3890355/93‑1 (MQ=21)

             cGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTgg                                                                             <  2:624573/93‑1 (MQ=18)

              gTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGga                                                                            <  2:2126915/93‑1 (MQ=18)

              gTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGga                                                                            <  2:5777034/93‑1 (MQ=18)

                 ttGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGaa                                                                         <  2:4741643/93‑1 (MQ=18)

                 ttGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGaa                                                                         <  1:3736839/93‑1 (MQ=18)

                 ttGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGaa                                                                         <  1:2692190/93‑1 (MQ=18)

                 ttGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGaa                                                                         <  1:4010176/93‑1 (MQ=18)

                   gCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAgg                                                                       <  2:5468743/93‑1 (MQ=18)

                     tGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGcc                                                                     <  1:1270206/93‑1 (MQ=18)

                      tttGCGGGTTAAGTTCGCGCTGATCCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGTGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCt                                                                    <  1:552755/92‑1 (MQ=18)

                      gTTGCGGTTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCt                                                                    <  1:6429211/93‑1 (MQ=18)

                      gTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCt                                                                    <  1:3650639/93‑1 (MQ=18)

                       ttGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCtt                                                                   <  1:6566924/93‑1 (MQ=18)

                        tGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTg                                                                  <  2:1958098/93‑1 (MQ=18)

                         gCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGc                                                                 <  2:657926/93‑1 (MQ=18)

                         gCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGc                                                                 <  2:5063741/93‑1 (MQ=18)

                            ggTTAAGTGCGCGCTGCTGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTAt                                                              <  1:398457/93‑1 (MQ=18)

                            ggTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTAt                                                              <  2:5136251/93‑1 (MQ=18)

                            ggTTAAGTGCGCGCTGATGCCCCCCCCCCC‑‑C‑‑CCCCCTTCCCCCGGGGGGGGGGGGAAAAAACCCAA‑GCCCTCCCCTGGGGAAGGCCCTGCttt                                                              >  2:4506482/1‑91 (MQ=255)

                              ttAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTa                                                            <  1:4467587/93‑1 (MQ=18)

                               tAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACGGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAg                                                           <  1:3947578/93‑1 (MQ=18)

                               tAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAg                                                           <  2:6083234/93‑1 (MQ=18)

                                aaGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGt                                                          <  2:1487841/93‑1 (MQ=18)

                                aaGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGt                                                          <  2:4364795/93‑1 (MQ=18)

                                 aGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGtt                                                         <  2:2729588/93‑1 (MQ=18)

                                 aGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGtt                                                         <  1:5549412/93‑1 (MQ=18)

                                 aGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGtt                                                         <  1:5071597/93‑1 (MQ=18)

                                  gTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTg                                                        <  1:718194/93‑1 (MQ=18)

                                    gcgcgcTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCg                                                      <  2:2779618/93‑1 (MQ=21)

                                    gcgcgcTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCg                                                      <  2:4656646/93‑1 (MQ=21)

                                    gcgcgcTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCg                                                      <  1:2529276/93‑1 (MQ=21)

                                     cgcgcTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCGCCTGGAGAAGGCCTTGCTATTAGTTGCgg                                                     <  1:6403099/93‑1 (MQ=18)

                                        gcTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTAc                                                  <  1:1758632/93‑1 (MQ=21)

                                        gcTGATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTAc                                                  <  1:2901123/93‑1 (MQ=21)

                                           gATGCCCTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGc                                               <  2:3058079/93‑1 (MQ=25)

                                                ccTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGGGAGGGAGAAAACACTCAAGGCCTTTTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCtt                                          >  2:3315625/1‑93 (MQ=25)

                                                 cTCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTa                                         >  1:6513542/1‑93 (MQ=37)

                                                  tCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTaa                                        <  1:1019747/93‑1 (MQ=37)

                                                  tCACCCCG‑‑ACCCTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTaa                                        <  1:2986405/93‑1 (MQ=37)

                                                           gaccctc‑‑‑tCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGAtgtg                                 >  2:423680/5‑93 (MQ=38)

                                                           gaccctc‑‑‑tCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGAtgtg                                 <  1:2063902/89‑1 (MQ=38)

                                                            cccctc‑‑‑tCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGa                                <  2:2472581/90‑1 (MQ=255)

                                                            accctc‑‑‑tCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGa                                >  1:6219884/4‑93 (MQ=255)

                                                               ctc‑‑‑tCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGatat                             >  1:2598305/1‑93 (MQ=255)

                                                                 c‑‑‑tcCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATcc                           >  1:1018154/1‑93 (MQ=255)

                                                                 c‑‑‑tcCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATcc                           >  1:5281892/1‑93 (MQ=255)

                                                                      cccACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGa                         >  2:4888808/1‑93 (MQ=255)

                                                                       ccACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGaa                        >  1:1961021/1‑93 (MQ=255)

                                                                        cacaGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAAc                       >  2:1889543/1‑93 (MQ=255)

                                                                        cacaGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAAc                       <  1:2420224/93‑1 (MQ=255)

                                                                         acaGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCCGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACt                      >  1:4235026/1‑93 (MQ=255)

                                                                          caGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTg                     >  1:5008880/1‑93 (MQ=255)

                                                                           agggagagggagAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTgg                    >  2:779605/1‑93 (MQ=255)

                                                                            gggagagggagaAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTggg                   <  2:5421783/93‑1 (MQ=255)

                                                                            gggagagggagaAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTggg                   >  2:1988727/1‑93 (MQ=255)

                                                                             ggagagggagaAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACGTTAATGATGTGATATCCGAACTGGgt                  >  1:5359187/1‑93 (MQ=255)

                                                                             ggagagggagaAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGGACTGGgt                  >  1:5584983/1‑93 (MQ=255)

                                                                             ggagagggagaAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGgt                  >  2:3546595/1‑93 (MQ=255)

                                                                             ggagagggagaAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGgt                  <  2:5623383/93‑1 (MQ=255)

                                                                             ggagagggagaAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGgt                  <  1:6053312/93‑1 (MQ=255)

                                                                             gaagagggataAAACACTCAAGGCCTAATCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGgt                  <  1:1438115/91‑1 (MQ=255)

                                                                              gagagggagaAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGgtg                 >  1:3372099/1‑93 (MQ=255)

                                                                              gagagggagaAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGgtg                 >  1:5406358/1‑93 (MQ=255)

                                                                               agagagagaAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGgtgt                <  1:2045136/93‑1 (MQ=255)

                                                                                gagggagaAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGtgtg               <  2:59354/93‑1 (MQ=255)

                                                                                gagggagaAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGtgtg               >  1:5684652/1‑93 (MQ=255)

                                                                                 agggagaAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGc              >  1:2543375/1‑93 (MQ=255)

                                                                                 agggagaAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGc              <  2:5126253/93‑1 (MQ=255)

                                                                                 agggagaAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGc              <  2:6001362/93‑1 (MQ=255)

                                                                                 agggagaAAACACTCAAGGCCTTCTCCTGGAGAAGGACTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGc              >  1:3694301/1‑93 (MQ=255)

                                                                                   ggagaAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAg            >  2:2282821/1‑93 (MQ=255)

                                                                                      gaAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCgg         >  2:86138/1‑93 (MQ=255)

                                                                                      gaAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCgg         <  1:4689880/93‑1 (MQ=255)

                                                                                       aaaaCACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCggg        <  2:4449947/93‑1 (MQ=255)

                                                                                       aaaaCACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCggg        >  2:1189650/1‑93 (MQ=255)

                                                                                       aaaaCACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCggg        >  1:808861/1‑93 (MQ=255)

                                                                                        aaaCACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGc       >  1:5898710/1‑93 (MQ=255)

                                                                                          acacTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCg     <  2:1359588/93‑1 (MQ=255)

                                                                                          acacTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCg     <  1:1165256/93‑1 (MQ=255)

                                                                                           cacTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCgg    >  2:5185151/1‑93 (MQ=255)

                                                                                            acTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGt   >  2:5580564/1‑93 (MQ=255)

                                                                                            acTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGt   >  2:3768134/1‑93 (MQ=255)

                                                                                            acTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGt   >  2:3401990/1‑93 (MQ=255)

                                                                                            acTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGt   <  1:1570992/93‑1 (MQ=255)

                                                                                             cTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTc  >  2:2259072/1‑93 (MQ=255)

GACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑CTC‑‑‑TCCCACAGGGAGAGGGAGAAAACACTCAA‑GCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTC  >  NC_000913/3957033‑3957210

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`