| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,957,551 | +T | intergenic (‑120/‑741) | ppiC ← / → rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,957,550 | 1 | . | T | 99.4% | 650.2 / ‑4.0 | 170 | intergenic (‑119/‑742) | ppiC/rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base T (72/97); total (72/98) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 177 total aligned reads displayed.
TAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑T‑GC‑TCGCA‑GG‑T‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT > NC_000913/3957470‑3957627 | tAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑GGGCTTCGCA‑GG‑T‑cc < 2:3319656/93‑1 (MQ=255) gCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑T‑ccct > 2:5822176/1‑91 (MQ=255) gCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑T‑ccct > 2:4225164/1‑91 (MQ=255) gCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCCGAAAAT‑CCGG‑GCTTCGCA‑GG‑T‑ccct > 1:323291/1‑91 (MQ=255) aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAgg < 2:3847279/93‑1 (MQ=255) ccGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAgggg < 2:2364591/93‑1 (MQ=255) gCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGgag > 2:6262039/1‑93 (MQ=255) gCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGgag < 2:2199789/93‑1 (MQ=255) cAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGGAAAAGACCGGAAAATACG‑G‑GCTTCGCA‑GGTT‑CCTCCAGGGgaga > 2:6163289/1‑93 (MQ=255) aGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGaa > 2:4070328/1‑93 (MQ=255) gATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGaaa > 2:1968274/1‑93 (MQ=255) gATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGaaa > 1:5733049/1‑93 (MQ=255) gATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGACCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TGCCTCAAGGGGAGaaa > 1:2211306/1‑93 (MQ=255) gATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGGAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGaaa > 2:3532283/1‑93 (MQ=255) gATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGaaa > 1:6114505/1‑93 (MQ=255) aTGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGGCCGGAAAAT‑CCGG‑GCTTCGCAGGG‑C‑CCTCAAGGGGAGaaaa > 2:3897634/1‑93 (MQ=255) gCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACt > 1:3254232/1‑93 (MQ=255) gCTAACGTAATGGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAATT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACt < 1:5724125/93‑1 (MQ=255) cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACtt < 1:1006674/93‑1 (MQ=255) cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACtt > 2:634484/1‑93 (MQ=255) aaCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAg > 2:2327016/1‑93 (MQ=255) aCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAgg < 2:3469925/93‑1 (MQ=255) aCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAgg < 2:1380534/93‑1 (MQ=255) aCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAgg < 2:452886/93‑1 (MQ=255) aCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑GGGCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAgg < 1:1552228/93‑1 (MQ=255) aCGTAATTGTCAGTCAGGGAGGGGCTGGTACATATTTGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAgg > 2:4970438/1‑93 (MQ=255) gTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGc > 2:5094879/1‑93 (MQ=255) gTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGc < 2:6047281/93‑1 (MQ=255) gTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGc > 2:5982183/1‑93 (MQ=255) aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCctc < 1:6150071/93‑1 (MQ=255) ttGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCctct < 1:2201271/93‑1 (MQ=255) tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTa < 2:252039/93‑1 (MQ=255) tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTa < 2:4565961/93‑1 (MQ=255) tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTa < 2:4297666/93‑1 (MQ=255) tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTa < 1:5604708/93‑1 (MQ=255) tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑GGGCTTCGCA‑GG‑TCCCTCAAGGGAAGAAAACTTAGGGCCTCTa < 1:6462484/93‑1 (MQ=255) tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg > 1:1915604/1‑93 (MQ=255) tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg < 1:5762937/93‑1 (MQ=255) tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑TGGCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg < 1:6604630/93‑1 (MQ=255) cagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATgg > 2:2909991/1‑93 (MQ=255) gtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGc > 1:1742818/1‑93 (MQ=255) cagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCCAGGGGAGAAAACTTAGGGCCTCTATGGGCTa > 1:3905186/1‑93 (MQ=255) cagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTa > 1:6577824/1‑93 (MQ=255) cagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTa < 2:334794/93‑1 (MQ=255) agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc > 1:6528463/1‑93 (MQ=255) ggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑GGGCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaa > 2:6578645/1‑93 (MQ=255) aGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAg > 1:4474624/1‑93 (MQ=255) aGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAg < 2:5423239/93‑1 (MQ=255) aGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAg < 1:809175/93‑1 (MQ=255) tgtcTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTc < 1:452672/90‑1 (MQ=255) tGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTc < 1:6320086/93‑1 (MQ=255) ggCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCa > 1:2713098/1‑93 (MQ=255) ggCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCa < 2:4313549/93‑1 (MQ=255) ggCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCa > 2:3135399/1‑93 (MQ=255) gCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAt < 2:480234/93‑1 (MQ=255) gCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAt < 2:821177/93‑1 (MQ=255) cTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAtt < 2:1322165/93‑1 (MQ=255) cTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAtt > 1:6204728/1‑93 (MQ=255) ggTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt < 1:5292589/93‑1 (MQ=255) ggTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt < 2:2424980/93‑1 (MQ=255) ggTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt < 2:531511/93‑1 (MQ=255) ggTACATATATGGCAAAAGCCCGGAAAAT‑CC‑GGGCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt > 1:1097349/1‑93 (MQ=255) gTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc < 1:5535285/93‑1 (MQ=255) gTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc < 2:6354216/93‑1 (MQ=255) gTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc < 2:1065107/93‑1 (MQ=255) aCATATATGGCAAAAGCGGGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg < 1:3578502/93‑1 (MQ=255) aCATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg < 2:710739/93‑1 (MQ=255) aCATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg < 2:5802184/93‑1 (MQ=255) cATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg < 1:551623/93‑1 (MQ=255) atatatGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgggg < 2:546043/93‑1 (MQ=255) atatatGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgggg > 1:1319584/1‑93 (MQ=255) atatatGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgggg < 2:1635327/93‑1 (MQ=255) tatatGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa < 2:3270969/93‑1 (MQ=255) atatGGAAAAGCCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAt < 2:1176514/93‑1 (MQ=255) tatGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg > 2:3659506/1‑93 (MQ=255) tatGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg > 1:3740304/1‑93 (MQ=255) tatGGCAAAAGCCAAGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg < 1:1038765/93‑1 (MQ=255) tGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt < 1:4952285/93‑1 (MQ=255) tGGCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt > 2:5288288/1‑93 (MQ=255) ggCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtt < 2:3382569/93‑1 (MQ=255) ggCAAAAGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtt < 2:2395126/93‑1 (MQ=255) gCAAAAGCGCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtta < 1:5123981/93‑1 (MQ=255) cAAAAGCCGGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttat < 1:5639361/93‑1 (MQ=255) aaaGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattt < 2:3702638/93‑1 (MQ=255) aaaGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattt > 1:3340570/1‑93 (MQ=255) aaaGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattt < 2:1696983/93‑1 (MQ=255) aGCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttta < 2:1537819/93‑1 (MQ=255) gCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat < 2:3820092/93‑1 (MQ=255) gCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat < 1:1461317/93‑1 (MQ=255) gCCCGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat > 2:4048752/1‑93 (MQ=255) gCCCGGAAAAT‑CC‑GGGCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttcttttat > 2:2087674/1‑93 (MQ=255) cccGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttatt < 2:5189173/93‑1 (MQ=255) cccGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttatt < 1:2857910/93‑1 (MQ=255) ccGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg < 1:5901757/93‑1 (MQ=255) ccGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg > 2:1126912/1‑93 (MQ=255) ccGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg > 1:4112769/1‑93 (MQ=255) ccGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg < 1:3376220/93‑1 (MQ=255) ccGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg > 2:2736385/1‑93 (MQ=255) cGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGt < 1:2284446/93‑1 (MQ=255) cGGAAAAT‑CCGG‑GCTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGCCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGt > 2:6219200/1‑93 (MQ=255) | TAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑T‑GC‑TCGCA‑GG‑T‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT > NC_000913/3957470‑3957627 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |